RNA–Protein interactions for RNA: ENST00000552008.5

LIMA1-209, Transcript of LIM domain and actin binding 1, humanhuman

TSL 5

Gene LIMA1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-209ENST00000552008 CYB5BO43169 146 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 EEF1E1O43324 174 aaKnown RBP1.16□□□□□ -2.22
LIMA1-209ENST00000552008 DENRO43583 198 aaKnown RBP1.16□□□□□ -2.22
LIMA1-209ENST00000552008 NDUFA2O43678 99 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 FADS1O60427 444 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 ENTPD6O75354 484 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 KLF7O75840 302 aaPredicted RBP1.16□□□□□ -2.22
LIMA1-209ENST00000552008 SULT1C4O75897 302 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 ATG12O94817 140 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 EPPINO95925 133 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 IGHMP01871 453 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 STATHP02808 62 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 CD14P08571 375 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 HTR1AP08908 422 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 CECR9P0C854 216 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 UBBP0CG47 229 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 SLC2A1P11166 492 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 CD79AP11912 226 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 COX6A1P12074 109 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 GADD45AP24522 165 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 CD34P28906 385 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 PEBP1P30086 187 aaKnown RBP1.16□□□□□ -2.22
LIMA1-209ENST00000552008 RCVRNP35243 200 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 FAUP35544 74 aaKnown RBP1.16□□□□□ -2.22
LIMA1-209ENST00000552008 CDKN2CP42773 168 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 MAP2K4P45985 399 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 RPL5P46777 297 aaKnown RBP1.16□□□□□ -2.22
LIMA1-209ENST00000552008 OR1E2P47887 323 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 KRTAP10-10P60014 251 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 GABARAPL2P60520 117 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 SNRPGP62308 76 aaKnown RBP1.16□□□□□ -2.22
LIMA1-209ENST00000552008 HBG1P69891 147 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 HBG2P69892 147 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 IGFBP7Q16270 282 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 NNATQ16517 81 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 TAF9Q16594 264 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 CEACAM16Q2WEN9 425 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 BSXQ3C1V8 233 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 Q499Y3 187 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 BCL2L15Q5TBC7 163 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 TMEM244Q5VVB8 128 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 GLT8D1Q68CQ7 371 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 AMMECR1LQ6DCA0 310 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 RPL22L1Q6P5R6 122 aaKnown RBP1.16□□□□□ -2.22
LIMA1-209ENST00000552008 DRAM2Q6UX65 266 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 IZUMO2Q6UXV1 221 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 Q6ZS92 163 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 LINC00299Q6ZSB3 139 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 RPS27LQ71UM5 84 aaKnown RBP1.16□□□□□ -2.22
LIMA1-209ENST00000552008 OLIG3Q7RTU3 272 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 ADM2Q7Z4H4 148 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 LRP11Q86VZ4 500 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 FUNDC1Q8IVP5 155 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 Q8IYB0 196 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 HS3ST5Q8IZT8 346 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 GAPTQ8N292 157 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 ZNF664Q8N3J9 261 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 YIPF7Q8N8F6 280 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 ZFP62Q8NB50 900 aaPredicted RBP1.16□□□□□ -2.22
LIMA1-209ENST00000552008 ST6GALNAC3Q8NDV1 305 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 BPIFB6Q8NFQ5 453 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 FDCSPQ8NFU4 85 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 OR2M3Q8NG83 312 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 OR5D16Q8NGK9 328 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 OR9I1Q8NGQ6 314 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 OR11L1Q8NGX0 322 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 GRPEL2Q8TAA5 225 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 GPR119Q8TDV5 335 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 NAT14Q8WUY8 206 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 S100ZQ8WXG8 99 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 ACOT12Q8WYK0 555 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 PP6455Q8WZ26 134 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 TSLPQ969D9 159 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 MAL2Q969L2 176 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 DGCR14Q96DF8 476 aaKnown RBP1.16□□□□□ -2.22
LIMA1-209ENST00000552008 MRPS24Q96EL2 167 aaKnown RBP1.16□□□□□ -2.22
LIMA1-209ENST00000552008 S100A16Q96FQ6 103 aaKnown RBP1.16□□□□□ -2.22
LIMA1-209ENST00000552008 LINC01587Q99440 93 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 GPER1Q99527 375 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 MED18Q9BUE0 208 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 MRPS26Q9BYN8 205 aaKnown RBP1.16□□□□□ -2.22
LIMA1-209ENST00000552008 KRTAP4-1Q9BYQ7 146 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 TTTY12Q9BZ98 90 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 LINC00470Q9BZP3 86 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 C20orf27Q9GZN8 174 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 HDHD2Q9H0R4 259 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 CST11Q9H112 138 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 OR51V1Q9H2C8 321 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 TXNIPQ9H3M7 391 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 SPACA1Q9HBV2 294 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 IFT46Q9NQC8 304 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 CMTM6Q9NX76 183 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 BABAM2Q9NXR7 383 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 TAS2R8Q9NYW2 309 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 UBAP1Q9NZ09 502 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 GLTPQ9NZD2 209 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 MED11Q9P086 117 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 RSL24D1Q9UHA3 163 aaKnown RBP1.16□□□□□ -2.22
LIMA1-209ENST00000552008 CLEC2DQ9UHP7 191 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 ZNF230Q9UIE0 474 aaPredicted RBP1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms