RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 IDNKQ5T6J7 187 aa9.48□□□□□ -0.89
PTCH1-221ENST00000550914 OR1P1Q8NH06 330 aa9.48□□□□□ -0.89
PTCH1-221ENST00000550914 PHLDA1Q8WV24 401 aaPredicted RBP9.48□□□□□ -0.89
PTCH1-221ENST00000550914 MOB3AQ96BX8 217 aa9.48□□□□□ -0.89
PTCH1-221ENST00000550914 DGCR14Q96DF8 476 aaKnown RBP9.48□□□□□ -0.89
PTCH1-221ENST00000550914 OR10C1Q96KK4 312 aa9.48□□□□□ -0.89
PTCH1-221ENST00000550914 TMEM56Q96MV1 263 aa9.48□□□□□ -0.89
PTCH1-221ENST00000550914 TSC22D3Q99576 134 aa9.48□□□□□ -0.89
PTCH1-221ENST00000550914 CSTL1Q9H114 145 aa9.48□□□□□ -0.89
PTCH1-221ENST00000550914 EHFQ9NZC4 300 aa9.48□□□□□ -0.89
PTCH1-221ENST00000550914 SMPXQ9UHP9 88 aa9.48□□□□□ -0.89
PTCH1-221ENST00000550914 PRNDQ9UKY0 176 aa9.48□□□□□ -0.89
PTCH1-221ENST00000550914 NUPL2O15504 423 aaKnown RBP9.47□□□□□ -0.89
PTCH1-221ENST00000550914 XRCC3O43542 346 aa9.47□□□□□ -0.89
PTCH1-221ENST00000550914 KRASP01116 189 aa9.47□□□□□ -0.89
PTCH1-221ENST00000550914 RLN1P04808 185 aa9.47□□□□□ -0.89
PTCH1-221ENST00000550914 CD5P06127 495 aa9.47□□□□□ -0.89
PTCH1-221ENST00000550914 RPL35AP18077 110 aaKnown RBP9.47□□□□□ -0.89
PTCH1-221ENST00000550914 Q56UQ5 140 aa9.47□□□□□ -0.89
PTCH1-221ENST00000550914 CMTM1Q8IZ96 169 aa9.47□□□□□ -0.89
PTCH1-221ENST00000550914 FCAMRQ8WWV6 532 aa9.47□□□□□ -0.89
PTCH1-221ENST00000550914 TXN2Q99757 166 aa9.47□□□□□ -0.89
PTCH1-221ENST00000550914 HINT2Q9BX68 163 aa9.47□□□□□ -0.89
PTCH1-221ENST00000550914 MFFQ9GZY8 342 aa9.47□□□□□ -0.89
PTCH1-221ENST00000550914 C11orf68Q9H3H3 251 aaKnown RBP9.47□□□□□ -0.89
PTCH1-221ENST00000550914 IFT46Q9NQC8 304 aa9.47□□□□□ -0.89
PTCH1-221ENST00000550914 FAM212BQ9NTI7 297 aaPredicted RBP9.47□□□□□ -0.89
PTCH1-221ENST00000550914 TMEM14BQ9NUH8 114 aa9.47□□□□□ -0.89
PTCH1-221ENST00000550914 ANAPC10Q9UM13 185 aa9.47□□□□□ -0.89
PTCH1-221ENST00000550914 IGHV3-21A0A0B4J1V1 117 aa9.46□□□□□ -0.9
PTCH1-221ENST00000550914 IGHV7-4-1A0A0J9YVY3 117 aa9.46□□□□□ -0.9
PTCH1-221ENST00000550914 MPTX1A8MV57 137 aa9.46□□□□□ -0.9
PTCH1-221ENST00000550914 CHEK1O14757 476 aa9.46□□□□□ -0.9
PTCH1-221ENST00000550914 LPAR6P43657 344 aa9.46□□□□□ -0.9
PTCH1-221ENST00000550914 TAS2R46P59540 309 aa9.46□□□□□ -0.9
PTCH1-221ENST00000550914 CROCCP3Q8IVE0 287 aa9.46□□□□□ -0.9
PTCH1-221ENST00000550914 RPP25LQ8N5L8 163 aaKnown RBP9.46□□□□□ -0.9
PTCH1-221ENST00000550914 UBAC2Q8NBM4 344 aa9.46□□□□□ -0.9
PTCH1-221ENST00000550914 TMEM116Q8NCL8 245 aa9.46□□□□□ -0.9
PTCH1-221ENST00000550914 TSPAN14Q8NG11 270 aa9.46□□□□□ -0.9
PTCH1-221ENST00000550914 S100A16Q96FQ6 103 aaKnown RBP9.46□□□□□ -0.9
PTCH1-221ENST00000550914 RNF2Q99496 336 aa9.46□□□□□ -0.9
PTCH1-221ENST00000550914 ZNF2Q9BSG1 426 aaPredicted RBP9.46□□□□□ -0.9
PTCH1-221ENST00000550914 RHPN1-AS1Q9BWJ2 59 aa9.46□□□□□ -0.9
PTCH1-221ENST00000550914 RNF167Q9H6Y7 350 aa9.46□□□□□ -0.9
PTCH1-221ENST00000550914 DNAH6Q9C0G6 4158 aa9.45□□□□□ -0.9
PTCH1-221ENST00000550914 IGHV3OR16-8A0A075B7F1 116 aa9.45□□□□□ -0.9
PTCH1-221ENST00000550914 LOC100506127A0A0U1RQW1 187 aa9.45□□□□□ -0.9
PTCH1-221ENST00000550914 C15orf61A6NNL5 157 aa9.45□□□□□ -0.9
PTCH1-221ENST00000550914 GPR31O00270 319 aa9.45□□□□□ -0.9
PTCH1-221ENST00000550914 ZNF207O43670 478 aaKnown RBP9.45□□□□□ -0.9
PTCH1-221ENST00000550914 FCER2P06734 321 aa9.45□□□□□ -0.9
PTCH1-221ENST00000550914 NAT1P18440 290 aa9.45□□□□□ -0.9
PTCH1-221ENST00000550914 G6PCP35575 357 aa9.45□□□□□ -0.9
PTCH1-221ENST00000550914 RFX2P48378 723 aa9.45□□□□□ -0.9
PTCH1-221ENST00000550914 MFAP4P55083 255 aa9.45□□□□□ -0.9
PTCH1-221ENST00000550914 APRG1Q8IVJ8 170 aa9.45□□□□□ -0.9
PTCH1-221ENST00000550914 ZNF114Q8NC26 417 aa9.45□□□□□ -0.9
PTCH1-221ENST00000550914 ZNF414Q96IQ9 312 aa9.45□□□□□ -0.9
PTCH1-221ENST00000550914 CMTM3Q96MX0 182 aa9.45□□□□□ -0.9
PTCH1-221ENST00000550914 RARRES2Q99969 163 aa9.45□□□□□ -0.9
PTCH1-221ENST00000550914 NXF2Q9GZY0 626 aaKnown RBP9.45□□□□□ -0.9
PTCH1-221ENST00000550914 Q9H521 79 aa9.45□□□□□ -0.9
PTCH1-221ENST00000550914 NSG2Q9Y328 171 aa9.45□□□□□ -0.9
PTCH1-221ENST00000550914 VPS13DQ5THJ4 4388 aa9.44□□□□□ -0.9
PTCH1-221ENST00000550914 TRAV14DV4A0A0A6YYC5 116 aa9.44□□□□□ -0.9
PTCH1-221ENST00000550914 MEIS3P1A6NDR6 274 aa9.44□□□□□ -0.9
PTCH1-221ENST00000550914 I3L2K1 104 aa9.44□□□□□ -0.9
PTCH1-221ENST00000550914 TCTAP57738 103 aa9.44□□□□□ -0.9
PTCH1-221ENST00000550914 PAFAH1B2P68402 229 aa9.44□□□□□ -0.9
PTCH1-221ENST00000550914 UBE2NLQ5JXB2 153 aa9.44□□□□□ -0.9
PTCH1-221ENST00000550914 FAM90A2PQ658T7 463 aa9.44□□□□□ -0.9
PTCH1-221ENST00000550914 OR5H2Q8NGV7 314 aa9.44□□□□□ -0.9
PTCH1-221ENST00000550914 OR6F1Q8NGZ6 308 aa9.44□□□□□ -0.9
PTCH1-221ENST00000550914 HERC2O95714 4834 aa9.43□□□□□ -0.9
PTCH1-221ENST00000550914 YIF1AO95070 293 aa9.43□□□□□ -0.9
PTCH1-221ENST00000550914 IFNA4P05014 189 aa9.43□□□□□ -0.9
PTCH1-221ENST00000550914 S100GP29377 79 aa9.43□□□□□ -0.9
PTCH1-221ENST00000550914 RBMS2Q15434 407 aaKnown RBP9.43□□□□□ -0.9
PTCH1-221ENST00000550914 LPCAT3Q6P1A2 487 aa9.43□□□□□ -0.9
PTCH1-221ENST00000550914 C11orf45Q8TAV5 145 aa9.43□□□□□ -0.9
PTCH1-221ENST00000550914 SLC25A46Q96AG3 418 aa9.43□□□□□ -0.9
PTCH1-221ENST00000550914 GINS3Q9BRX5 216 aa9.43□□□□□ -0.9
PTCH1-221ENST00000550914 FXYD6Q9H0Q3 95 aa9.43□□□□□ -0.9
PTCH1-221ENST00000550914 AGRNO00468 2067 aa9.43□□□□□ -0.9
PTCH1-221ENST00000550914 TRAV2A0A0B4J234 112 aa9.42□□□□□ -0.9
PTCH1-221ENST00000550914 DBX1A6NMT0 343 aa9.42□□□□□ -0.9
PTCH1-221ENST00000550914 DEDDO75618 318 aa9.42□□□□□ -0.9
PTCH1-221ENST00000550914 DFFBO76075 338 aa9.42□□□□□ -0.9
PTCH1-221ENST00000550914 PMP2P02689 132 aa9.42□□□□□ -0.9
PTCH1-221ENST00000550914 TAS2R20P59543 309 aa9.42□□□□□ -0.9
PTCH1-221ENST00000550914 PRCDQ00LT1 54 aa9.42□□□□□ -0.9
PTCH1-221ENST00000550914 ZNF124Q15973 351 aa9.42□□□□□ -0.9
PTCH1-221ENST00000550914 TMEM69Q5SWH9 247 aa9.42□□□□□ -0.9
PTCH1-221ENST00000550914 OR11H2Q8NH07 326 aa9.42□□□□□ -0.9
PTCH1-221ENST00000550914 MISP3Q96FF7 219 aa9.42□□□□□ -0.9
PTCH1-221ENST00000550914 SEC22AQ96IW7 307 aa9.42□□□□□ -0.9
PTCH1-221ENST00000550914 KRTAP17-1Q9BYP8 105 aa9.42□□□□□ -0.9
PTCH1-221ENST00000550914 VSIRQ9H7M9 311 aa9.42□□□□□ -0.9
PTCH1-221ENST00000550914 GNG7O60262 68 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms