RNA–Protein interactions for RNA: ENST00000550589.1

CCDC59-204, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-204ENST00000550589 FOXL1Q12952 345 aa3.56□□□□□ -1.84
CCDC59-204ENST00000550589 EFNB3Q15768 340 aa3.56□□□□□ -1.84
CCDC59-204ENST00000550589 S100A7AQ86SG5 101 aa3.56□□□□□ -1.84
CCDC59-204ENST00000550589 TGIF2LXQ8IUE1 241 aa3.56□□□□□ -1.84
CCDC59-204ENST00000550589 RPRMLQ8N4K4 120 aa3.56□□□□□ -1.84
CCDC59-204ENST00000550589 STPG3Q8N7X2 389 aa3.56□□□□□ -1.84
CCDC59-204ENST00000550589 ZNF383Q8NA42 475 aa3.56□□□□□ -1.84
CCDC59-204ENST00000550589 ZNF439Q8NDP4 499 aa3.56□□□□□ -1.84
CCDC59-204ENST00000550589 STXBP6Q8NFX7 210 aa3.56□□□□□ -1.84
CCDC59-204ENST00000550589 OR5AN1Q8NGI8 311 aa3.56□□□□□ -1.84
CCDC59-204ENST00000550589 OR1L4Q8NGR5 311 aa3.56□□□□□ -1.84
CCDC59-204ENST00000550589 OR2T10Q8NGZ9 312 aa3.56□□□□□ -1.84
CCDC59-204ENST00000550589 OR9G1Q8NH87 305 aa3.56□□□□□ -1.84
CCDC59-204ENST00000550589 GATAD1Q8WUU5 269 aa3.56□□□□□ -1.84
CCDC59-204ENST00000550589 H1FXQ92522 213 aaKnown RBP3.56□□□□□ -1.84
CCDC59-204ENST00000550589 ACY3Q96HD9 319 aa3.56□□□□□ -1.84
CCDC59-204ENST00000550589 YPEL4Q96NS1 127 aa3.56□□□□□ -1.84
CCDC59-204ENST00000550589 PFDN5Q99471 154 aa3.56□□□□□ -1.84
CCDC59-204ENST00000550589 LRFN3Q9BTN0 628 aa3.56□□□□□ -1.84
CCDC59-204ENST00000550589 GGTLC1Q9BX51 225 aa3.56□□□□□ -1.84
CCDC59-204ENST00000550589 MRPL32Q9BYC8 188 aaKnown RBP3.56□□□□□ -1.84
CCDC59-204ENST00000550589 TECRQ9NZ01 308 aaKnown RBP3.56□□□□□ -1.84
CCDC59-204ENST00000550589 WASHC3Q9Y3C0 194 aa3.56□□□□□ -1.84
CCDC59-204ENST00000550589 LSM4Q9Y4Z0 139 aaKnown RBP3.56□□□□□ -1.84
CCDC59-204ENST00000550589 LY96Q9Y6Y9 160 aa3.56□□□□□ -1.84
CCDC59-204ENST00000550589 DOCK7Q96N67 2140 aa3.56□□□□□ -1.84
CCDC59-204ENST00000550589 TGIF2-C20orf24A0A0A6YYL0 155 aa3.55□□□□□ -1.84
CCDC59-204ENST00000550589 IGHV1-69-2A0A0G2JMI3 117 aa3.55□□□□□ -1.84
CCDC59-204ENST00000550589 DPRXA6NFQ7 191 aa3.55□□□□□ -1.84
CCDC59-204ENST00000550589 RRHO14718 337 aa3.55□□□□□ -1.84
CCDC59-204ENST00000550589 SLC31A2O15432 143 aa3.55□□□□□ -1.84
CCDC59-204ENST00000550589 CA2P00918 260 aa3.55□□□□□ -1.84
CCDC59-204ENST00000550589 IGHV3-7P01780 117 aa3.55□□□□□ -1.84
CCDC59-204ENST00000550589 TFF1P04155 84 aa3.55□□□□□ -1.84
CCDC59-204ENST00000550589 IL6RP08887 468 aaPredicted RBP3.55□□□□□ -1.84
CCDC59-204ENST00000550589 AREGP15514 252 aa3.55□□□□□ -1.84
CCDC59-204ENST00000550589 SLURP1P55000 103 aa3.55□□□□□ -1.84
CCDC59-204ENST00000550589 COX19Q49B96 90 aa3.55□□□□□ -1.84
CCDC59-204ENST00000550589 TMEM177Q53S58 311 aa3.55□□□□□ -1.84
CCDC59-204ENST00000550589 FAM201AQ5SY85 155 aa3.55□□□□□ -1.84
CCDC59-204ENST00000550589 FAM78BQ5VT40 261 aa3.55□□□□□ -1.84
CCDC59-204ENST00000550589 C16orf82Q7Z2V1 217 aa3.55□□□□□ -1.84
CCDC59-204ENST00000550589 FAM216BQ8N7L0 139 aa3.55□□□□□ -1.84
CCDC59-204ENST00000550589 OR51G1Q8NGK1 321 aa3.55□□□□□ -1.84
CCDC59-204ENST00000550589 TMEM190Q8WZ59 177 aa3.55□□□□□ -1.84
CCDC59-204ENST00000550589 NEUROG1Q92886 237 aa3.55□□□□□ -1.84
CCDC59-204ENST00000550589 SNRNP40Q96DI7 357 aaKnown RBP3.55□□□□□ -1.84
CCDC59-204ENST00000550589 MGST2Q99735 147 aa3.55□□□□□ -1.84
CCDC59-204ENST00000550589 OR51M1Q9H341 326 aa3.55□□□□□ -1.84
CCDC59-204ENST00000550589 PATZ1Q9HBE1 687 aaKnown RBP3.55□□□□□ -1.84
CCDC59-204ENST00000550589 NIT2Q9NQR4 276 aa3.55□□□□□ -1.84
CCDC59-204ENST00000550589 SH3BGRL2Q9UJC5 107 aa3.55□□□□□ -1.84
CCDC59-204ENST00000550589 RALYQ9UKM9 306 aaKnown RBP3.55□□□□□ -1.84
CCDC59-204ENST00000550589 AMMECR1Q9Y4X0 333 aaPredicted RBP3.55□□□□□ -1.84
CCDC59-204ENST00000550589 A0A087X0M5 115 aa3.55□□□□□ -1.84
CCDC59-204ENST00000550589 TEX50A0A1B0GTY4 177 aa3.55□□□□□ -1.84
CCDC59-204ENST00000550589 A0A1B0GX30 115 aa3.55□□□□□ -1.84
CCDC59-204ENST00000550589 A0A1W2PPE3 182 aa3.55□□□□□ -1.84
CCDC59-204ENST00000550589 A0A1W2PPQ1 181 aa3.55□□□□□ -1.84
CCDC59-204ENST00000550589 C9JCJ5 164 aa3.55□□□□□ -1.84
CCDC59-204ENST00000550589 PRSS46E5RG02 174 aa3.55□□□□□ -1.84
CCDC59-204ENST00000550589 DVL1O14640 695 aa3.55□□□□□ -1.84
CCDC59-204ENST00000550589 HIST1H2BKO60814 126 aa3.55□□□□□ -1.84
CCDC59-204ENST00000550589 NDUFB4O95168 129 aa3.55□□□□□ -1.84
CCDC59-204ENST00000550589 RBP4P02753 201 aa3.55□□□□□ -1.84
CCDC59-204ENST00000550589 HIST1H2BJP06899 126 aa3.55□□□□□ -1.84
CCDC59-204ENST00000550589 CXCL1P09341 107 aa3.55□□□□□ -1.84
CCDC59-204ENST00000550589 SAA1P0DJI8 122 aaPredicted RBP3.55□□□□□ -1.84
CCDC59-204ENST00000550589 ARL14EPLP0DKL9 152 aa3.55□□□□□ -1.84
CCDC59-204ENST00000550589 HIST1H2BOP23527 126 aa3.55□□□□□ -1.84
CCDC59-204ENST00000550589 HIST1H2BBP33778 126 aa3.55□□□□□ -1.84
CCDC59-204ENST00000550589 ZNF137PP52743 207 aa3.55□□□□□ -1.84
CCDC59-204ENST00000550589 HIST1H2BDP58876 126 aa3.55□□□□□ -1.84
CCDC59-204ENST00000550589 LINC00205P59089 165 aa3.55□□□□□ -1.84
CCDC59-204ENST00000550589 HIST1H2BCP62807 126 aa3.55□□□□□ -1.84
CCDC59-204ENST00000550589 CD69Q07108 199 aa3.55□□□□□ -1.84
CCDC59-204ENST00000550589 TBR1Q16650 682 aa3.55□□□□□ -1.84
CCDC59-204ENST00000550589 HIST2H2BEQ16778 126 aa3.55□□□□□ -1.84
CCDC59-204ENST00000550589 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.55□□□□□ -1.84
CCDC59-204ENST00000550589 PRR31Q5SQ13 230 aa3.55□□□□□ -1.84
CCDC59-204ENST00000550589 DNLZQ5SXM8 178 aa3.55□□□□□ -1.84
CCDC59-204ENST00000550589 NCMAPQ5T1S8 102 aa3.55□□□□□ -1.84
CCDC59-204ENST00000550589 MIC13Q5XKP0 118 aa3.55□□□□□ -1.84
CCDC59-204ENST00000550589 TMEM200BQ69YZ2 307 aa3.55□□□□□ -1.84
CCDC59-204ENST00000550589 FAM53AQ6NSI3 398 aaPredicted RBP3.55□□□□□ -1.84
CCDC59-204ENST00000550589 ZNF343Q6P1L6 599 aa3.55□□□□□ -1.84
CCDC59-204ENST00000550589 SSX7Q7RTT5 188 aa3.55□□□□□ -1.84
CCDC59-204ENST00000550589 MMD2Q8IY49 270 aa3.55□□□□□ -1.84
CCDC59-204ENST00000550589 TMEM167AQ8TBQ9 72 aa3.55□□□□□ -1.84
CCDC59-204ENST00000550589 ZNF596Q8TC21 504 aa3.55□□□□□ -1.84
CCDC59-204ENST00000550589 ZCCHC14Q8WYQ9 949 aaKnown RBP3.55□□□□□ -1.84
CCDC59-204ENST00000550589 HIST1H2BHQ93079 126 aa3.55□□□□□ -1.84
CCDC59-204ENST00000550589 LEAP2Q969E1 77 aa3.55□□□□□ -1.84
CCDC59-204ENST00000550589 TIMD4Q96H15 378 aa3.55□□□□□ -1.84
CCDC59-204ENST00000550589 SFRP2Q96HF1 295 aa3.55□□□□□ -1.84
CCDC59-204ENST00000550589 HIST1H2BNQ99877 126 aa3.55□□□□□ -1.84
CCDC59-204ENST00000550589 HIST1H2BMQ99879 126 aa3.55□□□□□ -1.84
CCDC59-204ENST00000550589 RNF5Q99942 180 aa3.55□□□□□ -1.84
CCDC59-204ENST00000550589 PYGO2Q9BRQ0 406 aa3.55□□□□□ -1.84
CCDC59-204ENST00000550589 CHRDL1Q9BU40 450 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms