RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 KRASP01116 189 aa11.32□□□□□ -0.6
RAB5C-205ENST00000550013 CTSGP08311 255 aa11.32□□□□□ -0.6
RAB5C-205ENST00000550013 LPAR6P43657 344 aa11.32□□□□□ -0.6
RAB5C-205ENST00000550013 FCAMRQ8WWV6 532 aa11.32□□□□□ -0.6
RAB5C-205ENST00000550013 ATP6V0BQ99437 205 aa11.32□□□□□ -0.6
RAB5C-205ENST00000550013 RARRES2Q99969 163 aa11.32□□□□□ -0.6
RAB5C-205ENST00000550013 CSTL1Q9H114 145 aa11.32□□□□□ -0.6
RAB5C-205ENST00000550013 FBXL17Q9UF56 701 aa11.32□□□□□ -0.6
RAB5C-205ENST00000550013 PCLOQ9Y6V0 5065 aa11.31□□□□□ -0.6
RAB5C-205ENST00000550013 IGKV3-7A0A075B6H7 116 aa11.31□□□□□ -0.6
RAB5C-205ENST00000550013 A0A0A6YYH2 397 aa11.31□□□□□ -0.6
RAB5C-205ENST00000550013 IGHV7-4-1A0A0J9YVY3 117 aa11.31□□□□□ -0.6
RAB5C-205ENST00000550013 A6NJ64 397 aa11.31□□□□□ -0.6
RAB5C-205ENST00000550013 DBX1A6NMT0 343 aa11.31□□□□□ -0.6
RAB5C-205ENST00000550013 MPTX1A8MV57 137 aa11.31□□□□□ -0.6
RAB5C-205ENST00000550013 CHEK1O14757 476 aa11.31□□□□□ -0.6
RAB5C-205ENST00000550013 MRPS14O60783 128 aaKnown RBP11.31□□□□□ -0.6
RAB5C-205ENST00000550013 PGLYRP1O75594 196 aaPredicted RBP11.31□□□□□ -0.6
RAB5C-205ENST00000550013 F2RP25116 425 aa11.31□□□□□ -0.6
RAB5C-205ENST00000550013 G6PCP35575 357 aa11.31□□□□□ -0.6
RAB5C-205ENST00000550013 SCAND1P57086 179 aa11.31□□□□□ -0.6
RAB5C-205ENST00000550013 TMEM116Q8NCL8 245 aa11.31□□□□□ -0.6
RAB5C-205ENST00000550013 RHPN1-AS1Q9BWJ2 59 aa11.31□□□□□ -0.6
RAB5C-205ENST00000550013 C6orf62Q9GZU0 229 aaPredicted RBP11.31□□□□□ -0.6
RAB5C-205ENST00000550013 EHFQ9NZC4 300 aa11.31□□□□□ -0.6
RAB5C-205ENST00000550013 KIAA1109Q2LD37 5005 aa11.31□□□□□ -0.6
RAB5C-205ENST00000550013 IGHV3OR16-13A0A075B7E8 117 aa11.3□□□□□ -0.6
RAB5C-205ENST00000550013 IGHV3-74A0A0B4J1X5 117 aa11.3□□□□□ -0.6
RAB5C-205ENST00000550013 CBX5P45973 191 aa11.3□□□□□ -0.6
RAB5C-205ENST00000550013 RFX2P48378 723 aa11.3□□□□□ -0.6
RAB5C-205ENST00000550013 PRR20EP86478 221 aa11.3□□□□□ -0.6
RAB5C-205ENST00000550013 PRR20CP86479 221 aa11.3□□□□□ -0.6
RAB5C-205ENST00000550013 PRR20DP86480 221 aa11.3□□□□□ -0.6
RAB5C-205ENST00000550013 PRR20BP86481 221 aa11.3□□□□□ -0.6
RAB5C-205ENST00000550013 PRR20AP86496 221 aa11.3□□□□□ -0.6
RAB5C-205ENST00000550013 GBGT1Q8N5D6 347 aa11.3□□□□□ -0.6
RAB5C-205ENST00000550013 OR11H2Q8NH07 326 aa11.3□□□□□ -0.6
RAB5C-205ENST00000550013 GATAD1Q8WUU5 269 aa11.3□□□□□ -0.6
RAB5C-205ENST00000550013 FCGR1BQ92637 280 aa11.3□□□□□ -0.6
RAB5C-205ENST00000550013 DIABLOQ9NR28 239 aa11.3□□□□□ -0.6
RAB5C-205ENST00000550013 RAB26Q9ULW5 256 aa11.3□□□□□ -0.6
RAB5C-205ENST00000550013 LOC100506127A0A0U1RQW1 187 aa11.29□□□□□ -0.6
RAB5C-205ENST00000550013 DEFB4AO15263 64 aa11.29□□□□□ -0.6
RAB5C-205ENST00000550013 SNAPC5O75971 98 aa11.29□□□□□ -0.6
RAB5C-205ENST00000550013 YIF1AO95070 293 aa11.29□□□□□ -0.6
RAB5C-205ENST00000550013 RBMS2Q15434 407 aaKnown RBP11.29□□□□□ -0.6
RAB5C-205ENST00000550013 C11orf45Q8TAV5 145 aa11.29□□□□□ -0.6
RAB5C-205ENST00000550013 MOB3AQ96BX8 217 aa11.29□□□□□ -0.6
RAB5C-205ENST00000550013 DGCR14Q96DF8 476 aaKnown RBP11.29□□□□□ -0.6
RAB5C-205ENST00000550013 MISP3Q96FF7 219 aa11.29□□□□□ -0.6
RAB5C-205ENST00000550013 ZNF2Q9BSG1 426 aaPredicted RBP11.29□□□□□ -0.6
RAB5C-205ENST00000550013 FXYD6Q9H0Q3 95 aa11.29□□□□□ -0.6
RAB5C-205ENST00000550013 C11orf68Q9H3H3 251 aaKnown RBP11.29□□□□□ -0.6
RAB5C-205ENST00000550013 IFT46Q9NQC8 304 aa11.29□□□□□ -0.6
RAB5C-205ENST00000550013 I3L2K1 104 aa11.28□□□□□ -0.6
RAB5C-205ENST00000550013 NUPL2O15504 423 aaKnown RBP11.28□□□□□ -0.6
RAB5C-205ENST00000550013 IGHV3-48P01763 117 aa11.28□□□□□ -0.6
RAB5C-205ENST00000550013 PMP2P02689 132 aa11.28□□□□□ -0.6
RAB5C-205ENST00000550013 RELQ04864 619 aaPredicted RBP11.28□□□□□ -0.6
RAB5C-205ENST00000550013 FAM90A2PQ658T7 463 aa11.28□□□□□ -0.6
RAB5C-205ENST00000550013 DHRS11Q6UWP2 260 aa11.28□□□□□ -0.6
RAB5C-205ENST00000550013 OR1P1Q8NH06 330 aa11.28□□□□□ -0.6
RAB5C-205ENST00000550013 BORCS5Q969J3 196 aa11.28□□□□□ -0.6
RAB5C-205ENST00000550013 SLC25A46Q96AG3 418 aa11.28□□□□□ -0.6
RAB5C-205ENST00000550013 OR10C1Q96KK4 312 aa11.28□□□□□ -0.6
RAB5C-205ENST00000550013 TMEM56Q96MV1 263 aa11.28□□□□□ -0.6
RAB5C-205ENST00000550013 MFFQ9GZY8 342 aa11.28□□□□□ -0.6
RAB5C-205ENST00000550013 PRNDQ9UKY0 176 aa11.28□□□□□ -0.6
RAB5C-205ENST00000550013 IFNA4P05014 189 aa11.27□□□□□ -0.61
RAB5C-205ENST00000550013 MFAP4P55083 255 aa11.27□□□□□ -0.61
RAB5C-205ENST00000550013 CMC4P56277 68 aaPredicted RBP11.27□□□□□ -0.61
RAB5C-205ENST00000550013 CADM3Q8N126 398 aa11.27□□□□□ -0.61
RAB5C-205ENST00000550013 TSPAN14Q8NG11 270 aa11.27□□□□□ -0.61
RAB5C-205ENST00000550013 NXF2Q9GZY0 626 aaKnown RBP11.27□□□□□ -0.61
RAB5C-205ENST00000550013 TMEM14BQ9NUH8 114 aa11.27□□□□□ -0.61
RAB5C-205ENST00000550013 ANAPC10Q9UM13 185 aa11.27□□□□□ -0.61
RAB5C-205ENST00000550013 AGRNO00468 2067 aa11.26□□□□□ -0.61
RAB5C-205ENST00000550013 TRAV14DV4A0A0A6YYC5 116 aa11.26□□□□□ -0.61
RAB5C-205ENST00000550013 C15orf61A6NNL5 157 aa11.26□□□□□ -0.61
RAB5C-205ENST00000550013 XRCC3O43542 346 aa11.26□□□□□ -0.61
RAB5C-205ENST00000550013 CA1P00915 261 aaPredicted RBP11.26□□□□□ -0.61
RAB5C-205ENST00000550013 PHLDA2Q53GA4 152 aa11.26□□□□□ -0.61
RAB5C-205ENST00000550013 TCF24Q7RTU0 167 aa11.26□□□□□ -0.61
RAB5C-205ENST00000550013 CMTM3Q96MX0 182 aa11.26□□□□□ -0.61
RAB5C-205ENST00000550013 FKBP11Q9NYL4 201 aa11.26□□□□□ -0.61
RAB5C-205ENST00000550013 GPR31O00270 319 aa11.25□□□□□ -0.61
RAB5C-205ENST00000550013 MT-CO2P00403 227 aa11.25□□□□□ -0.61
RAB5C-205ENST00000550013 APOHP02749 345 aaPredicted RBP11.25□□□□□ -0.61
RAB5C-205ENST00000550013 LEMD1Q68G75 181 aa11.25□□□□□ -0.61
RAB5C-205ENST00000550013 CMTM1Q8IZ96 169 aa11.25□□□□□ -0.61
RAB5C-205ENST00000550013 LILRB2Q8N423 598 aa11.25□□□□□ -0.61
RAB5C-205ENST00000550013 OR5H2Q8NGV7 314 aa11.25□□□□□ -0.61
RAB5C-205ENST00000550013 C2CD4CQ8TF44 421 aa11.25□□□□□ -0.61
RAB5C-205ENST00000550013 ST8SIA2Q92186 375 aa11.25□□□□□ -0.61
RAB5C-205ENST00000550013 IGHV3-66A0A0C4DH42 116 aa11.24□□□□□ -0.61
RAB5C-205ENST00000550013 TGFBR1P36897 503 aa11.24□□□□□ -0.61
RAB5C-205ENST00000550013 DEFB131AP59861 70 aa11.24□□□□□ -0.61
RAB5C-205ENST00000550013 TOMM20LQ6UXN7 152 aa11.24□□□□□ -0.61
RAB5C-205ENST00000550013 FAM24BQ8N5W8 94 aa11.24□□□□□ -0.61
RAB5C-205ENST00000550013 PINX1Q96BK5 328 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms