RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 INS-IGF2F8WCM5 200 aa18.04■□□□□ 0.48
SMARCD1-203ENST00000547247 CDX1P47902 265 aaPredicted RBP18.04■□□□□ 0.48
SMARCD1-203ENST00000547247 OXA1LQ15070 435 aa18.04■□□□□ 0.48
SMARCD1-203ENST00000547247 TATDN3Q17R31 274 aa18.04■□□□□ 0.48
SMARCD1-203ENST00000547247 NSUN5P1Q3KNT7 163 aa18.04■□□□□ 0.48
SMARCD1-203ENST00000547247 C19orf35Q6ZS72 473 aa18.04■□□□□ 0.48
SMARCD1-203ENST00000547247 OR2C3Q8N628 320 aa18.04■□□□□ 0.48
SMARCD1-203ENST00000547247 ZNF491Q8N8L2 437 aa18.04■□□□□ 0.48
SMARCD1-203ENST00000547247 A0A1W2PRX2 142 aa18.03■□□□□ 0.48
SMARCD1-203ENST00000547247 CEBPZOSA8MTT3 80 aa18.03■□□□□ 0.48
SMARCD1-203ENST00000547247 KIAA0141Q14154 515 aaPredicted RBP18.03■□□□□ 0.48
SMARCD1-203ENST00000547247 UBE2E2Q96LR5 201 aa18.03■□□□□ 0.48
SMARCD1-203ENST00000547247 TRBV9A0A0B4J1U6 114 aa18.02■□□□□ 0.48
SMARCD1-203ENST00000547247 ADARB2-AS1A8MUL3 147 aa18.02■□□□□ 0.48
SMARCD1-203ENST00000547247 FAM90A26D6RGX4 464 aa18.02■□□□□ 0.48
SMARCD1-203ENST00000547247 CCSO14618 274 aa18.02■□□□□ 0.48
SMARCD1-203ENST00000547247 CYB5BO43169 146 aa18.02■□□□□ 0.48
SMARCD1-203ENST00000547247 HIST1H1BP16401 226 aaKnown RBP18.02■□□□□ 0.48
SMARCD1-203ENST00000547247 IAH1Q2TAA2 248 aaPredicted RBP18.02■□□□□ 0.48
SMARCD1-203ENST00000547247 OR10C1Q96KK4 312 aa18.02■□□□□ 0.48
SMARCD1-203ENST00000547247 FANCD2OSQ96PS1 177 aa18.02■□□□□ 0.48
SMARCD1-203ENST00000547247 F11RQ9Y624 299 aaKnown RBP18.02■□□□□ 0.48
SMARCD1-203ENST00000547247 A0A0G2JLM5 398 aa18.01■□□□□ 0.47
SMARCD1-203ENST00000547247 C13orf42A0A1B0GVH6 325 aa18.01■□□□□ 0.47
SMARCD1-203ENST00000547247 C7orf66A4D0T2 115 aa18.01■□□□□ 0.47
SMARCD1-203ENST00000547247 RHOGP84095 191 aa18.01■□□□□ 0.47
SMARCD1-203ENST00000547247 OR1L6Q8NGR2 347 aa18.01■□□□□ 0.47
SMARCD1-203ENST00000547247 HEYLQ9NQ87 328 aaPredicted RBP18.01■□□□□ 0.47
SMARCD1-203ENST00000547247 FAM223BA6NKX1 122 aa18■□□□□ 0.47
SMARCD1-203ENST00000547247 NUDT19A8MXV4 375 aa18■□□□□ 0.47
SMARCD1-203ENST00000547247 FAM25EA8MYX2 175 aa18■□□□□ 0.47
SMARCD1-203ENST00000547247 OR2J3O76001 311 aa18■□□□□ 0.47
SMARCD1-203ENST00000547247 SNCAP37840 140 aa18■□□□□ 0.47
SMARCD1-203ENST00000547247 KLK9Q2XQG4 91 aa18■□□□□ 0.47
SMARCD1-203ENST00000547247 FAM223AQ8IWN6 122 aa18■□□□□ 0.47
SMARCD1-203ENST00000547247 ZNF114Q8NC26 417 aa18■□□□□ 0.47
SMARCD1-203ENST00000547247 NECAP1Q8NC96 275 aa18■□□□□ 0.47
SMARCD1-203ENST00000547247 KLHL30-AS1Q8NEE0 82 aa18■□□□□ 0.47
SMARCD1-203ENST00000547247 USMG5Q96IX5 58 aa18■□□□□ 0.47
SMARCD1-203ENST00000547247 P2RX4Q99571 388 aa18■□□□□ 0.47
SMARCD1-203ENST00000547247 KLK9Q9UKQ9 250 aa18■□□□□ 0.47
SMARCD1-203ENST00000547247 IGLV11-55A0A075B6I3 123 aa18■□□□□ 0.47
SMARCD1-203ENST00000547247 C5orf51A6NDU8 294 aa18■□□□□ 0.47
SMARCD1-203ENST00000547247 C2orf68Q2NKX9 166 aa18■□□□□ 0.47
SMARCD1-203ENST00000547247 SLC25A24Q6NUK1 477 aa18■□□□□ 0.47
SMARCD1-203ENST00000547247 C18orf65Q6ZTR6 163 aa18■□□□□ 0.47
SMARCD1-203ENST00000547247 OR1P1Q8NH06 330 aa18■□□□□ 0.47
SMARCD1-203ENST00000547247 HIPK2Q9H2X6 1198 aa18■□□□□ 0.47
SMARCD1-203ENST00000547247 RBKSQ9H477 322 aa18■□□□□ 0.47
SMARCD1-203ENST00000547247 ALG5Q9Y673 324 aa18■□□□□ 0.47
SMARCD1-203ENST00000547247 SSNA1O43805 119 aa17.99■□□□□ 0.47
SMARCD1-203ENST00000547247 MED6O75586 246 aa17.99■□□□□ 0.47
SMARCD1-203ENST00000547247 DEFA5Q01523 94 aa17.99■□□□□ 0.47
SMARCD1-203ENST00000547247 GSG1LQ6UXU4 331 aa17.99■□□□□ 0.47
SMARCD1-203ENST00000547247 ZBTB8BQ8NAP8 495 aaPredicted RBP17.99■□□□□ 0.47
SMARCD1-203ENST00000547247 OR4D5Q8NGN0 318 aa17.99■□□□□ 0.47
SMARCD1-203ENST00000547247 DTD1Q8TEA8 209 aa17.99■□□□□ 0.47
SMARCD1-203ENST00000547247 C4orf3Q8WVX3 66 aa17.99■□□□□ 0.47
SMARCD1-203ENST00000547247 GNB4Q9HAV0 340 aa17.99■□□□□ 0.47
SMARCD1-203ENST00000547247 THYN1Q9P016 225 aa17.99■□□□□ 0.47
SMARCD1-203ENST00000547247 GSKIPQ9P0R6 139 aa17.99■□□□□ 0.47
SMARCD1-203ENST00000547247 FBXL7Q9UJT9 491 aa17.99■□□□□ 0.47
SMARCD1-203ENST00000547247 DMRT1Q9Y5R6 373 aa17.99■□□□□ 0.47
SMARCD1-203ENST00000547247 M0QZ24 198 aa17.98■□□□□ 0.47
SMARCD1-203ENST00000547247 NKX2-1P43699 371 aaPredicted RBP17.98■□□□□ 0.47
SMARCD1-203ENST00000547247 SUB1P53999 127 aaKnown RBP eCLIP17.98■□□□□ 0.47
SMARCD1-203ENST00000547247 ID3Q02535 119 aa17.98■□□□□ 0.47
SMARCD1-203ENST00000547247 IGHV3-11P01762 117 aa17.97■□□□□ 0.47
SMARCD1-203ENST00000547247 MFAP2P55001 183 aa17.97■□□□□ 0.47
SMARCD1-203ENST00000547247 ATP5G2Q06055 141 aa17.97■□□□□ 0.47
SMARCD1-203ENST00000547247 C8orf86Q6ZUL3 223 aa17.97■□□□□ 0.47
SMARCD1-203ENST00000547247 C2orf50Q96LR7 162 aa17.97■□□□□ 0.47
SMARCD1-203ENST00000547247 OR5B12Q96R08 314 aa17.97■□□□□ 0.47
SMARCD1-203ENST00000547247 SYNGR2O43760 224 aa17.96■□□□□ 0.47
SMARCD1-203ENST00000547247 HTR2BP41595 481 aa17.96■□□□□ 0.47
SMARCD1-203ENST00000547247 C15orf32Q32M92 178 aa17.96■□□□□ 0.47
SMARCD1-203ENST00000547247 MAGT1Q9H0U3 335 aa17.96■□□□□ 0.47
SMARCD1-203ENST00000547247 GOSR2O14653 212 aa17.96■□□□□ 0.46
SMARCD1-203ENST00000547247 NDUFB8O95169 186 aa17.96■□□□□ 0.46
SMARCD1-203ENST00000547247 RNASE2P10153 161 aaKnown RBP17.96■□□□□ 0.46
SMARCD1-203ENST00000547247 RUNX1Q01196 453 aa17.96■□□□□ 0.46
SMARCD1-203ENST00000547247 BSXQ3C1V8 233 aa17.96■□□□□ 0.46
SMARCD1-203ENST00000547247 OR4F17Q8NGA8 305 aa17.96■□□□□ 0.46
SMARCD1-203ENST00000547247 OR4F4Q96R69 305 aa17.96■□□□□ 0.46
SMARCD1-203ENST00000547247 I3L521 148 aa17.95■□□□□ 0.46
SMARCD1-203ENST00000547247 WRBO00258 174 aa17.95■□□□□ 0.46
SMARCD1-203ENST00000547247 LGALS1P09382 135 aaKnown RBP17.95■□□□□ 0.46
SMARCD1-203ENST00000547247 SLC24A4Q8NFF2 622 aa17.95■□□□□ 0.46
SMARCD1-203ENST00000547247 CIB3Q96Q77 187 aaPredicted RBP17.95■□□□□ 0.46
SMARCD1-203ENST00000547247 U3KQ87 197 aa17.95■□□□□ 0.46
SMARCD1-203ENST00000547247 SCGB1D2O95969 90 aa17.94■□□□□ 0.46
SMARCD1-203ENST00000547247 IAPPP10997 89 aa17.94■□□□□ 0.46
SMARCD1-203ENST00000547247 MISP3Q96FF7 219 aa17.94■□□□□ 0.46
SMARCD1-203ENST00000547247 CXorf58Q96LI9 332 aa17.94■□□□□ 0.46
SMARCD1-203ENST00000547247 IFNA10P01566 189 aa17.93■□□□□ 0.46
SMARCD1-203ENST00000547247 POLR2GP62487 172 aaKnown RBP eCLIP17.93■□□□□ 0.46
SMARCD1-203ENST00000547247 EXOSC2Q13868 293 aaKnown RBP17.93■□□□□ 0.46
SMARCD1-203ENST00000547247 C2orf83Q53S99 150 aa17.93■□□□□ 0.46
SMARCD1-203ENST00000547247 C11orf87Q6NUJ2 197 aa17.93■□□□□ 0.46
SMARCD1-203ENST00000547247 ZNF343Q6P1L6 599 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms