RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 IBA57Q5T440 356 aaKnown RBP7.18□□□□□ -1.26
TDP1-204ENST00000545686 PCNX2A6NKB5 2137 aa7.17□□□□□ -1.26
TDP1-204ENST00000545686 FRYQ5TBA9 3013 aa7.17□□□□□ -1.26
TDP1-204ENST00000545686 IZUMO1RA6ND01 250 aa7.17□□□□□ -1.26
TDP1-204ENST00000545686 C19orf67A6NJJ6 358 aa7.17□□□□□ -1.26
TDP1-204ENST00000545686 GGTLC3B5MD39 225 aa7.17□□□□□ -1.26
TDP1-204ENST00000545686 IGLV2-8P01709 118 aa7.17□□□□□ -1.26
TDP1-204ENST00000545686 FRMD6-AS1P0C7T7 363 aa7.17□□□□□ -1.26
TDP1-204ENST00000545686 SFTPCP11686 197 aa7.17□□□□□ -1.26
TDP1-204ENST00000545686 SPATA45Q537H7 98 aa7.17□□□□□ -1.26
TDP1-204ENST00000545686 C2orf83Q53S99 150 aa7.17□□□□□ -1.26
TDP1-204ENST00000545686 DOLPP1Q86YN1 238 aa7.17□□□□□ -1.26
TDP1-204ENST00000545686 C1orf210Q8IVY1 113 aa7.17□□□□□ -1.26
TDP1-204ENST00000545686 OR2Z1Q8NG97 314 aa7.17□□□□□ -1.26
TDP1-204ENST00000545686 ZNF503Q96F45 646 aa7.17□□□□□ -1.26
TDP1-204ENST00000545686 PLPPR2Q96GM1 343 aa7.17□□□□□ -1.26
TDP1-204ENST00000545686 TRIB1Q96RU8 372 aa7.17□□□□□ -1.26
TDP1-204ENST00000545686 CDC42EP3Q9UKI2 254 aa7.17□□□□□ -1.26
TDP1-204ENST00000545686 FZR1Q9UM11 496 aa7.17□□□□□ -1.26
TDP1-204ENST00000545686 ZFP30Q9Y2G7 519 aa7.17□□□□□ -1.26
TDP1-204ENST00000545686 RNF114Q9Y508 228 aa7.17□□□□□ -1.26
TDP1-204ENST00000545686 DYSFO75923 2080 aa7.17□□□□□ -1.26
TDP1-204ENST00000545686 TECTAO75443 2155 aa7.17□□□□□ -1.26
TDP1-204ENST00000545686 PRR14LQ5THK1 2151 aa7.17□□□□□ -1.26
TDP1-204ENST00000545686 IGHV1-18A0A0C4DH31 117 aa7.17□□□□□ -1.26
TDP1-204ENST00000545686 BMPR1BO00238 502 aa7.17□□□□□ -1.26
TDP1-204ENST00000545686 OR7C2O60412 319 aa7.17□□□□□ -1.26
TDP1-204ENST00000545686 ACTL6BO94805 426 aa7.17□□□□□ -1.26
TDP1-204ENST00000545686 NPSP0C0P6 89 aa7.17□□□□□ -1.26
TDP1-204ENST00000545686 KIR2DL2P43627 348 aaPredicted RBP7.17□□□□□ -1.26
TDP1-204ENST00000545686 PRRX1P54821 245 aa7.17□□□□□ -1.26
TDP1-204ENST00000545686 C17orf58Q2M2W7 97 aa7.17□□□□□ -1.26
TDP1-204ENST00000545686 CT45A1Q5HYN5 189 aa7.17□□□□□ -1.26
TDP1-204ENST00000545686 KLHDC1Q8N7A1 406 aa7.17□□□□□ -1.26
TDP1-204ENST00000545686 CNEP1R1Q8N9A8 125 aa7.17□□□□□ -1.26
TDP1-204ENST00000545686 OR1L8Q8NGR8 309 aa7.17□□□□□ -1.26
TDP1-204ENST00000545686 CT45A3Q8NHU0 189 aa7.17□□□□□ -1.26
TDP1-204ENST00000545686 STARD4Q96DR4 205 aa7.17□□□□□ -1.26
TDP1-204ENST00000545686 RNASE7Q9H1E1 156 aaKnown RBP7.17□□□□□ -1.26
TDP1-204ENST00000545686 TNCP24821 2201 aa7.16□□□□□ -1.26
TDP1-204ENST00000545686 KBTBD11-OT1A0A1B0GTJ5 212 aa7.16□□□□□ -1.26
TDP1-204ENST00000545686 J3QR06 171 aa7.16□□□□□ -1.26
TDP1-204ENST00000545686 UPK2O00526 184 aa7.16□□□□□ -1.26
TDP1-204ENST00000545686 C8orf88P0DMB2 117 aa7.16□□□□□ -1.26
TDP1-204ENST00000545686 IGLC2P0DOY2 106 aa7.16□□□□□ -1.26
TDP1-204ENST00000545686 IGLC3P0DOY3 106 aa7.16□□□□□ -1.26
TDP1-204ENST00000545686 SRIP30626 198 aa7.16□□□□□ -1.26
TDP1-204ENST00000545686 ZNF83P51522 516 aa7.16□□□□□ -1.26
TDP1-204ENST00000545686 MRPS11P82912 194 aaKnown RBP7.16□□□□□ -1.26
TDP1-204ENST00000545686 C1orf229Q6ZS94 237 aaPredicted RBP7.16□□□□□ -1.26
TDP1-204ENST00000545686 FAM231DQ6ZW35 169 aa7.16□□□□□ -1.26
TDP1-204ENST00000545686 ZNF439Q8NDP4 499 aa7.16□□□□□ -1.26
TDP1-204ENST00000545686 RCHY1Q96PM5 261 aa7.16□□□□□ -1.26
TDP1-204ENST00000545686 FAM103A1Q9BTL3 118 aaKnown RBP7.16□□□□□ -1.26
TDP1-204ENST00000545686 PRO3102Q9H379 93 aa7.16□□□□□ -1.26
TDP1-204ENST00000545686 PRR33A8MZF0 331 aa7.16□□□□□ -1.26
TDP1-204ENST00000545686 LHBP01229 141 aa7.16□□□□□ -1.26
TDP1-204ENST00000545686 APCSP02743 223 aa7.16□□□□□ -1.26
TDP1-204ENST00000545686 PMCHP20382 165 aa7.16□□□□□ -1.26
TDP1-204ENST00000545686 PMCHL1Q16048 86 aa7.16□□□□□ -1.26
TDP1-204ENST00000545686 NIT1Q86X76 327 aa7.16□□□□□ -1.26
TDP1-204ENST00000545686 OR5B3Q8NH48 314 aa7.16□□□□□ -1.26
TDP1-204ENST00000545686 ZNF714Q96N38 554 aa7.16□□□□□ -1.26
TDP1-204ENST00000545686 LINC00574Q9H8X3 128 aa7.16□□□□□ -1.26
TDP1-204ENST00000545686 SLC35D1Q9NTN3 355 aa7.16□□□□□ -1.26
TDP1-204ENST00000545686 BET1LQ9NYM9 111 aa7.16□□□□□ -1.26
TDP1-204ENST00000545686 CBY1Q9Y3M2 126 aa7.16□□□□□ -1.26
TDP1-204ENST00000545686 IGKV1OR2-108A0A075B7D4 117 aa7.15□□□□□ -1.26
TDP1-204ENST00000545686 C20orf202A1L168 122 aa7.15□□□□□ -1.26
TDP1-204ENST00000545686 DPRXA6NFQ7 191 aa7.15□□□□□ -1.26
TDP1-204ENST00000545686 FXYD3Q14802 87 aa7.15□□□□□ -1.26
TDP1-204ENST00000545686 VWA1Q6PCB0 445 aa7.15□□□□□ -1.26
TDP1-204ENST00000545686 ZNRF1Q8ND25 227 aa7.15□□□□□ -1.26
TDP1-204ENST00000545686 FAM222BQ8WU58 562 aa7.15□□□□□ -1.26
TDP1-204ENST00000545686 TSKUQ8WUA8 353 aa7.15□□□□□ -1.26
TDP1-204ENST00000545686 CACNG8Q8WXS5 425 aa7.15□□□□□ -1.26
TDP1-204ENST00000545686 BORCS7Q96B45 105 aa7.15□□□□□ -1.26
TDP1-204ENST00000545686 SLC25A33Q9BSK2 321 aa7.15□□□□□ -1.26
TDP1-204ENST00000545686 CHRDL1Q9BU40 450 aa7.15□□□□□ -1.26
TDP1-204ENST00000545686 ZNF331Q9NQX6 463 aaPredicted RBP7.15□□□□□ -1.26
TDP1-204ENST00000545686 PLSCR4Q9NRQ2 329 aa7.15□□□□□ -1.26
TDP1-204ENST00000545686 IGHV3OR15-7A0A075B7D8 119 aa7.15□□□□□ -1.27
TDP1-204ENST00000545686 AHRRA9YTQ3 701 aa7.15□□□□□ -1.27
TDP1-204ENST00000545686 INS-IGF2F8WCM5 200 aa7.15□□□□□ -1.27
TDP1-204ENST00000545686 HYPMO75409 117 aa7.15□□□□□ -1.27
TDP1-204ENST00000545686 IGHV3-13P01766 116 aa7.15□□□□□ -1.27
TDP1-204ENST00000545686 C3orf79P0CE67 100 aa7.15□□□□□ -1.27
TDP1-204ENST00000545686 USF1P22415 310 aaPredicted RBP7.15□□□□□ -1.27
TDP1-204ENST00000545686 CHRNB4P30926 498 aa7.15□□□□□ -1.27
TDP1-204ENST00000545686 HNRNPA3P51991 378 aaKnown RBP7.15□□□□□ -1.27
TDP1-204ENST00000545686 SELENOVP59797 346 aa7.15□□□□□ -1.27
TDP1-204ENST00000545686 BATFQ16520 125 aa7.15□□□□□ -1.27
TDP1-204ENST00000545686 LYG1Q8N1E2 194 aa7.15□□□□□ -1.27
TDP1-204ENST00000545686 C9orf106Q8NAJ2 232 aa7.15□□□□□ -1.27
TDP1-204ENST00000545686 MBD6Q96DN6 1003 aa7.15□□□□□ -1.27
TDP1-204ENST00000545686 HINT2Q9BX68 163 aa7.15□□□□□ -1.27
TDP1-204ENST00000545686 KNTC1P50748 2209 aa7.14□□□□□ -1.27
TDP1-204ENST00000545686 PSMB11A5LHX3 300 aa7.14□□□□□ -1.27
TDP1-204ENST00000545686 IGHV3-7P01780 117 aa7.14□□□□□ -1.27
TDP1-204ENST00000545686 RNASE2P10153 161 aaKnown RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms