RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 PYY3Q5JQD4 70 aa14.39□□□□□ -0.11
SCARB1-208ENST00000544327 ACTL10Q5JWF8 245 aa14.39□□□□□ -0.11
SCARB1-208ENST00000544327 LYPD2Q6UXB3 125 aa14.39□□□□□ -0.11
SCARB1-208ENST00000544327 VSTM2AQ8TAG5 236 aa14.39□□□□□ -0.11
SCARB1-208ENST00000544327 CCL17Q92583 94 aa14.39□□□□□ -0.11
SCARB1-208ENST00000544327 FLYWCH2Q96CP2 140 aaKnown RBP14.39□□□□□ -0.11
SCARB1-208ENST00000544327 TRBV20OR9-2A0A075B6H5 130 aa14.38□□□□□ -0.11
SCARB1-208ENST00000544327 A0A1W2PN81 502 aa14.38□□□□□ -0.11
SCARB1-208ENST00000544327 A0A1W2PPQ1 181 aa14.38□□□□□ -0.11
SCARB1-208ENST00000544327 DLL1O00548 723 aa14.38□□□□□ -0.11
SCARB1-208ENST00000544327 CHRNA7P36544 502 aa14.38□□□□□ -0.11
SCARB1-208ENST00000544327 FOXL1Q12952 345 aa14.38□□□□□ -0.11
SCARB1-208ENST00000544327 GAMTQ14353 236 aa14.38□□□□□ -0.11
SCARB1-208ENST00000544327 TMEM155Q4W5P6 130 aa14.38□□□□□ -0.11
SCARB1-208ENST00000544327 PRR30Q53SZ7 412 aaPredicted RBP14.38□□□□□ -0.11
SCARB1-208ENST00000544327 ZNF114Q8NC26 417 aa14.38□□□□□ -0.11
SCARB1-208ENST00000544327 OR4C13Q8NGP0 309 aa14.38□□□□□ -0.11
SCARB1-208ENST00000544327 VKORC1Q9BQB6 163 aa14.38□□□□□ -0.11
SCARB1-208ENST00000544327 C9JCJ5 164 aa14.38□□□□□ -0.11
SCARB1-208ENST00000544327 DVL1O14640 695 aa14.38□□□□□ -0.11
SCARB1-208ENST00000544327 OR5G3P0C626 314 aa14.38□□□□□ -0.11
SCARB1-208ENST00000544327 TMEM183AQ8IXX5 376 aa14.38□□□□□ -0.11
SCARB1-208ENST00000544327 OR4P4Q8NGL7 312 aa14.38□□□□□ -0.11
SCARB1-208ENST00000544327 OR10D4PQ8NGN7 298 aa14.38□□□□□ -0.11
SCARB1-208ENST00000544327 OR10X1Q8NGY0 326 aa14.38□□□□□ -0.11
SCARB1-208ENST00000544327 H1FXQ92522 213 aaKnown RBP14.38□□□□□ -0.11
SCARB1-208ENST00000544327 ACY3Q96HD9 319 aa14.38□□□□□ -0.11
SCARB1-208ENST00000544327 SFRP2Q96HF1 295 aa14.38□□□□□ -0.11
SCARB1-208ENST00000544327 UHRF2Q96PU4 802 aa14.38□□□□□ -0.11
SCARB1-208ENST00000544327 LRFN3Q9BTN0 628 aa14.38□□□□□ -0.11
SCARB1-208ENST00000544327 COMMD5Q9GZQ3 224 aa14.38□□□□□ -0.11
SCARB1-208ENST00000544327 DYNLRB1Q9NP97 96 aa14.38□□□□□ -0.11
SCARB1-208ENST00000544327 TMEM167BQ9NRX6 74 aa14.38□□□□□ -0.11
SCARB1-208ENST00000544327 IGKV1OR2-108A0A075B7D4 117 aa14.37□□□□□ -0.11
SCARB1-208ENST00000544327 FOXH1O75593 365 aa14.37□□□□□ -0.11
SCARB1-208ENST00000544327 IGHV2-70P01814 119 aa14.37□□□□□ -0.11
SCARB1-208ENST00000544327 ERHP84090 104 aaKnown RBP14.37□□□□□ -0.11
SCARB1-208ENST00000544327 FAM78BQ5VT40 261 aa14.37□□□□□ -0.11
SCARB1-208ENST00000544327 MIR17HGQ75NE6 70 aa14.37□□□□□ -0.11
SCARB1-208ENST00000544327 TECRQ9NZ01 308 aaKnown RBP14.37□□□□□ -0.11
SCARB1-208ENST00000544327 WASHC3Q9Y3C0 194 aa14.37□□□□□ -0.11
SCARB1-208ENST00000544327 MDFIC2A0A1B0GVS7 189 aa14.36□□□□□ -0.11
SCARB1-208ENST00000544327 IGLV2-23P01705 113 aa14.36□□□□□ -0.11
SCARB1-208ENST00000544327 C1QTNF9P0C862 333 aa14.36□□□□□ -0.11
SCARB1-208ENST00000544327 CHRNB4P30926 498 aa14.36□□□□□ -0.11
SCARB1-208ENST00000544327 APOBEC3AP31941 199 aaPredicted RBP14.36□□□□□ -0.11
SCARB1-208ENST00000544327 PDLIM4P50479 330 aa14.36□□□□□ -0.11
SCARB1-208ENST00000544327 FOXC1Q12948 553 aa14.36□□□□□ -0.11
SCARB1-208ENST00000544327 OR9G1Q8NH87 305 aa14.36□□□□□ -0.11
SCARB1-208ENST00000544327 DMRT1Q9Y5R6 373 aa14.36□□□□□ -0.11
SCARB1-208ENST00000544327 ZGRF1Q86YA3 2104 aa14.36□□□□□ -0.11
SCARB1-208ENST00000544327 LINC00587B1AMM8 73 aa14.36□□□□□ -0.11
SCARB1-208ENST00000544327 B9A039 149 aa14.36□□□□□ -0.11
SCARB1-208ENST00000544327 OR10J1P30954 320 aa14.36□□□□□ -0.11
SCARB1-208ENST00000544327 SSX2Q16385 188 aa14.36□□□□□ -0.11
SCARB1-208ENST00000544327 PQLC2Q6ZP29 291 aa14.36□□□□□ -0.11
SCARB1-208ENST00000544327 MOB3BQ86TA1 216 aa14.36□□□□□ -0.11
SCARB1-208ENST00000544327 OR5T1Q8NG75 326 aa14.36□□□□□ -0.11
SCARB1-208ENST00000544327 OR10W1Q8NGF6 305 aa14.36□□□□□ -0.11
SCARB1-208ENST00000544327 OR1P1Q8NH06 330 aa14.36□□□□□ -0.11
SCARB1-208ENST00000544327 FAM122AQ96E09 287 aa14.36□□□□□ -0.11
SCARB1-208ENST00000544327 ASPMQ8IZT6 3477 aa14.35□□□□□ -0.11
SCARB1-208ENST00000544327 TRBV23-1A0A0A0MS06 115 aa14.35□□□□□ -0.11
SCARB1-208ENST00000544327 IL3RAP26951 378 aa14.35□□□□□ -0.11
SCARB1-208ENST00000544327 RNASEH2CQ8TDP1 164 aaKnown RBP14.35□□□□□ -0.11
SCARB1-208ENST00000544327 HIST1H2BLQ99880 126 aa14.35□□□□□ -0.11
SCARB1-208ENST00000544327 MRPL32Q9BYC8 188 aaKnown RBP14.35□□□□□ -0.11
SCARB1-208ENST00000544327 ICE1Q9Y2F5 2266 aa14.35□□□□□ -0.11
SCARB1-208ENST00000544327 IGHV1-69-2A0A0G2JMI3 117 aa14.34□□□□□ -0.11
SCARB1-208ENST00000544327 CGB1A6NKQ9 187 aa14.34□□□□□ -0.11
SCARB1-208ENST00000544327 FSTL3O95633 263 aa14.34□□□□□ -0.11
SCARB1-208ENST00000544327 MC5RP33032 325 aa14.34□□□□□ -0.11
SCARB1-208ENST00000544327 REG1BP48304 166 aa14.34□□□□□ -0.11
SCARB1-208ENST00000544327 TAS2R45P59539 299 aa14.34□□□□□ -0.11
SCARB1-208ENST00000544327 RPL15P61313 204 aaKnown RBP14.34□□□□□ -0.11
SCARB1-208ENST00000544327 HLA-DRB5Q30154 266 aa14.34□□□□□ -0.11
SCARB1-208ENST00000544327 TEX38Q6PEX7 206 aa14.34□□□□□ -0.11
SCARB1-208ENST00000544327 OCC1Q8TAD7 63 aa14.34□□□□□ -0.11
SCARB1-208ENST00000544327 ZNF503Q96F45 646 aa14.34□□□□□ -0.11
SCARB1-208ENST00000544327 RNF2Q99496 336 aa14.34□□□□□ -0.11
SCARB1-208ENST00000544327 AKAP13Q12802 2813 aa14.34□□□□□ -0.11
SCARB1-208ENST00000544327 TRAV9-1A0A075B6T8 112 aa14.34□□□□□ -0.11
SCARB1-208ENST00000544327 PGPEP1LA6NFU8 196 aa14.34□□□□□ -0.11
SCARB1-208ENST00000544327 CD3EP07766 207 aa14.34□□□□□ -0.11
SCARB1-208ENST00000544327 IGHV1-8P0DP01 117 aa14.34□□□□□ -0.11
SCARB1-208ENST00000544327 C11orf42Q8N5U0 333 aa14.34□□□□□ -0.11
SCARB1-208ENST00000544327 OR10G8Q8NGN5 311 aa14.34□□□□□ -0.11
SCARB1-208ENST00000544327 TNFRSF14Q92956 283 aa14.34□□□□□ -0.11
SCARB1-208ENST00000544327 AURKAIP1Q9NWT8 199 aaPredicted RBP14.34□□□□□ -0.11
SCARB1-208ENST00000544327 PSMB11A5LHX3 300 aa14.33□□□□□ -0.12
SCARB1-208ENST00000544327 ACTL6BO94805 426 aa14.33□□□□□ -0.12
SCARB1-208ENST00000544327 FABP4P15090 132 aa14.33□□□□□ -0.12
SCARB1-208ENST00000544327 DIAPH2-AS1Q14236 149 aa14.33□□□□□ -0.12
SCARB1-208ENST00000544327 CLEC12BQ2HXU8 276 aa14.33□□□□□ -0.12
SCARB1-208ENST00000544327 PDZD11Q5EBL8 140 aa14.33□□□□□ -0.12
SCARB1-208ENST00000544327 TGIF2LXQ8IUE1 241 aa14.33□□□□□ -0.12
SCARB1-208ENST00000544327 SCNM1Q9BWG6 230 aa14.33□□□□□ -0.12
SCARB1-208ENST00000544327 E7EUB6 86 aa14.32□□□□□ -0.12
SCARB1-208ENST00000544327 LGALS7P47929 136 aa14.32□□□□□ -0.12
SCARB1-208ENST00000544327 SUB1P53999 127 aaKnown RBP eCLIP14.32□□□□□ -0.124e-6■■■■■ 28.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms