RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 PRR20CP86479 221 aa11.3□□□□□ -0.6
MSH2-206ENST00000543555 PRR20DP86480 221 aa11.3□□□□□ -0.6
MSH2-206ENST00000543555 PRR20BP86481 221 aa11.3□□□□□ -0.6
MSH2-206ENST00000543555 PRR20AP86496 221 aa11.3□□□□□ -0.6
MSH2-206ENST00000543555 TMEM155Q4W5P6 130 aa11.3□□□□□ -0.6
MSH2-206ENST00000543555 FLYWCH2Q96CP2 140 aaKnown RBP11.3□□□□□ -0.6
MSH2-206ENST00000543555 NABP2Q9BQ15 211 aa11.3□□□□□ -0.6
MSH2-206ENST00000543555 PLAUP00749 431 aa11.3□□□□□ -0.6
MSH2-206ENST00000543555 CHRNB4P30926 498 aa11.3□□□□□ -0.6
MSH2-206ENST00000543555 RHOBP62745 196 aa11.3□□□□□ -0.6
MSH2-206ENST00000543555 DIAPH2-AS1Q14236 149 aa11.3□□□□□ -0.6
MSH2-206ENST00000543555 ST6GALNAC6Q969X2 333 aa11.3□□□□□ -0.6
MSH2-206ENST00000543555 F6UZH7 168 aa11.29□□□□□ -0.6
MSH2-206ENST00000543555 TGOLN2O43493 480 aa11.29□□□□□ -0.6
MSH2-206ENST00000543555 SMIM6P0DI80 62 aa11.29□□□□□ -0.6
MSH2-206ENST00000543555 RNASE2P10153 161 aaKnown RBP11.29□□□□□ -0.6
MSH2-206ENST00000543555 PDPNQ86YL7 162 aa11.29□□□□□ -0.6
MSH2-206ENST00000543555 OR4C13Q8NGP0 309 aa11.29□□□□□ -0.6
MSH2-206ENST00000543555 OR1L8Q8NGR8 309 aa11.29□□□□□ -0.6
MSH2-206ENST00000543555 LINC01560Q8TB33 94 aa11.29□□□□□ -0.6
MSH2-206ENST00000543555 TXNDC17Q9BRA2 123 aa11.29□□□□□ -0.6
MSH2-206ENST00000543555 TCEAL7Q9BRU2 100 aa11.29□□□□□ -0.6
MSH2-206ENST00000543555 SEPSECSQ9HD40 501 aaKnown RBP11.29□□□□□ -0.6
MSH2-206ENST00000543555 ASH1LQ9NR48 2969 aaKnown RBP11.29□□□□□ -0.6
MSH2-206ENST00000543555 A0A087X0M5 115 aa11.29□□□□□ -0.6
MSH2-206ENST00000543555 A0A1B0GX30 115 aa11.29□□□□□ -0.6
MSH2-206ENST00000543555 H7BYZ3 331 aa11.29□□□□□ -0.6
MSH2-206ENST00000543555 HIST1H2BKO60814 126 aa11.29□□□□□ -0.6
MSH2-206ENST00000543555 HIST1H2BJP06899 126 aa11.29□□□□□ -0.6
MSH2-206ENST00000543555 PFN1P07737 140 aaKnown RBP11.29□□□□□ -0.6
MSH2-206ENST00000543555 HIST1H2BOP23527 126 aa11.29□□□□□ -0.6
MSH2-206ENST00000543555 HIST1H2BBP33778 126 aa11.29□□□□□ -0.6
MSH2-206ENST00000543555 CA7P43166 264 aa11.29□□□□□ -0.6
MSH2-206ENST00000543555 ZNF137PP52743 207 aa11.29□□□□□ -0.6
MSH2-206ENST00000543555 HIST1H2BDP58876 126 aa11.29□□□□□ -0.6
MSH2-206ENST00000543555 HIST1H2BCP62807 126 aa11.29□□□□□ -0.6
MSH2-206ENST00000543555 RPL8P62917 257 aaKnown RBP11.29□□□□□ -0.6
MSH2-206ENST00000543555 HIST2H2BEQ16778 126 aa11.29□□□□□ -0.6
MSH2-206ENST00000543555 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.29□□□□□ -0.6
MSH2-206ENST00000543555 TMEM144Q7Z5S9 345 aa11.29□□□□□ -0.6
MSH2-206ENST00000543555 OR10W1Q8NGF6 305 aa11.29□□□□□ -0.6
MSH2-206ENST00000543555 HIST1H2BHQ93079 126 aa11.29□□□□□ -0.6
MSH2-206ENST00000543555 HIST1H2BNQ99877 126 aa11.29□□□□□ -0.6
MSH2-206ENST00000543555 HIST1H2BMQ99879 126 aa11.29□□□□□ -0.6
MSH2-206ENST00000543555 COMMD5Q9GZQ3 224 aa11.29□□□□□ -0.6
MSH2-206ENST00000543555 NDUFA4L2Q9NRX3 87 aa11.29□□□□□ -0.6
MSH2-206ENST00000543555 DOK5Q9P104 306 aa11.29□□□□□ -0.6
MSH2-206ENST00000543555 LRRK2Q5S007 2527 aa11.29□□□□□ -0.6
MSH2-206ENST00000543555 FAM90A27PA6NNH2 459 aa11.28□□□□□ -0.6
MSH2-206ENST00000543555 HOXA5P20719 270 aa11.28□□□□□ -0.6
MSH2-206ENST00000543555 SPATA31B1PQ5VZV4 182 aa11.28□□□□□ -0.6
MSH2-206ENST00000543555 OR9G1Q8NH87 305 aa11.28□□□□□ -0.6
MSH2-206ENST00000543555 NANPQ8TBE9 248 aa11.28□□□□□ -0.6
MSH2-206ENST00000543555 SLC45A2Q9UMX9 530 aa11.28□□□□□ -0.6
MSH2-206ENST00000543555 NDUFB4O95168 129 aa11.28□□□□□ -0.6
MSH2-206ENST00000543555 S100A9P06702 114 aaKnown RBP11.28□□□□□ -0.6
MSH2-206ENST00000543555 LINC00869P0C866 280 aa11.28□□□□□ -0.6
MSH2-206ENST00000543555 USF1P22415 310 aaPredicted RBP11.28□□□□□ -0.6
MSH2-206ENST00000543555 GNLYP22749 145 aa11.28□□□□□ -0.6
MSH2-206ENST00000543555 GRNP28799 593 aaKnown RBP11.28□□□□□ -0.6
MSH2-206ENST00000543555 NDUFA6P56556 154 aa11.28□□□□□ -0.6
MSH2-206ENST00000543555 FBXL19-AS1Q494R0 122 aa11.28□□□□□ -0.6
MSH2-206ENST00000543555 MOB3BQ86TA1 216 aa11.28□□□□□ -0.6
MSH2-206ENST00000543555 TMEM167AQ8TBQ9 72 aa11.28□□□□□ -0.6
MSH2-206ENST00000543555 ANAPC16Q96DE5 110 aa11.28□□□□□ -0.6
MSH2-206ENST00000543555 CLN5O75503 358 aa11.27□□□□□ -0.6
MSH2-206ENST00000543555 IGHV1-8P0DP01 117 aa11.27□□□□□ -0.6
MSH2-206ENST00000543555 GCHFRP30047 84 aa11.27□□□□□ -0.6
MSH2-206ENST00000543555 GALR1P47211 349 aa11.27□□□□□ -0.6
MSH2-206ENST00000543555 NECAP1Q8NC96 275 aa11.27□□□□□ -0.6
MSH2-206ENST00000543555 OR4A5Q8NH83 315 aa11.27□□□□□ -0.6
MSH2-206ENST00000543555 VSTM2AQ8TAG5 236 aa11.27□□□□□ -0.6
MSH2-206ENST00000543555 PYGO2Q9BRQ0 406 aa11.27□□□□□ -0.6
MSH2-206ENST00000543555 WASHC3Q9Y3C0 194 aa11.27□□□□□ -0.6
MSH2-206ENST00000543555 TGIF2LXQ8IUE1 241 aa11.27□□□□□ -0.61
MSH2-206ENST00000543555 C11orf42Q8N5U0 333 aa11.27□□□□□ -0.61
MSH2-206ENST00000543555 OR5B12Q96R08 314 aa11.27□□□□□ -0.61
MSH2-206ENST00000543555 DERL1Q9BUN8 251 aa11.27□□□□□ -0.61
MSH2-206ENST00000543555 IGKV1OR2-108A0A075B7D4 117 aa11.27□□□□□ -0.61
MSH2-206ENST00000543555 TRBV23-1A0A0A0MS06 115 aa11.27□□□□□ -0.61
MSH2-206ENST00000543555 INS-IGF2F8WCM5 200 aa11.27□□□□□ -0.61
MSH2-206ENST00000543555 S100PP25815 95 aa11.27□□□□□ -0.61
MSH2-206ENST00000543555 GAMTQ14353 236 aa11.27□□□□□ -0.61
MSH2-206ENST00000543555 LINC01551Q86U37 167 aa11.27□□□□□ -0.61
MSH2-206ENST00000543555 PCGF1Q9BSM1 259 aa11.27□□□□□ -0.61
MSH2-206ENST00000543555 CSMD2Q7Z408 3487 aa11.27□□□□□ -0.61
MSH2-206ENST00000543555 ERHP84090 104 aaKnown RBP11.26□□□□□ -0.61
MSH2-206ENST00000543555 CD69Q07108 199 aa11.26□□□□□ -0.61
MSH2-206ENST00000543555 SLC16A13Q7RTY0 426 aa11.26□□□□□ -0.61
MSH2-206ENST00000543555 FRZBQ92765 325 aa11.26□□□□□ -0.61
MSH2-206ENST00000543555 YTHDF2Q9Y5A9 579 aaKnown RBP11.26□□□□□ -0.61
MSH2-206ENST00000543555 ANKHD1Q8IWZ3 2542 aaKnown RBP11.26□□□□□ -0.61
MSH2-206ENST00000543555 E7EUB6 86 aa11.26□□□□□ -0.61
MSH2-206ENST00000543555 PHOX2AO14813 284 aa11.26□□□□□ -0.61
MSH2-206ENST00000543555 IGLV2-23P01705 113 aa11.26□□□□□ -0.61
MSH2-206ENST00000543555 TRGC1P0CF51 173 aa11.26□□□□□ -0.61
MSH2-206ENST00000543555 CDX1P47902 265 aaPredicted RBP11.26□□□□□ -0.61
MSH2-206ENST00000543555 FAM78BQ5VT40 261 aa11.26□□□□□ -0.61
MSH2-206ENST00000543555 MUC15Q8N387 334 aa11.26□□□□□ -0.61
MSH2-206ENST00000543555 ELOVL1Q9BW60 279 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms