RNA–Protein interactions for RNA: ENST00000543185.5

HDAC4-215, Transcript of histone deacetylase 4, humanhuman

TSL 5 BASIC

Gene HDAC4, Length 8,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-215ENST00000543185 SERF1AO75920 110 aa16.51■□□□□ 0.23
HDAC4-215ENST00000543185 SIRT4Q9Y6E7 314 aaPredicted RBP16.51■□□□□ 0.23
HDAC4-215ENST00000543185 BHLHA9Q7RTU4 235 aa16.51■□□□□ 0.23
HDAC4-215ENST00000543185 LHFPL6Q9Y693 200 aa16.51■□□□□ 0.23
HDAC4-215ENST00000543185 PRR33A8MZF0 331 aa16.51■□□□□ 0.23
HDAC4-215ENST00000543185 ZPLD1Q8TCW7 415 aa16.51■□□□□ 0.23
HDAC4-215ENST00000543185 C18orf15Q96N68 181 aa16.51■□□□□ 0.23
HDAC4-215ENST00000543185 PLAUP00749 431 aa16.51■□□□□ 0.23
HDAC4-215ENST00000543185 CCL3P10147 92 aa16.51■□□□□ 0.23
HDAC4-215ENST00000543185 NBEAP1P0C6P0 100 aa16.51■□□□□ 0.23
HDAC4-215ENST00000543185 NRN1LQ496H8 165 aa16.51■□□□□ 0.23
HDAC4-215ENST00000543185 RFLNBQ8N5W9 214 aa16.51■□□□□ 0.23
HDAC4-215ENST00000543185 R4GN57 208 aa16.51■□□□□ 0.23
HDAC4-215ENST00000543185 ZNF205O95201 554 aa16.5■□□□□ 0.23
HDAC4-215ENST00000543185 STARD6P59095 220 aa16.5■□□□□ 0.23
HDAC4-215ENST00000543185 SLC25A47Q6Q0C1 308 aa16.5■□□□□ 0.23
HDAC4-215ENST00000543185 PCSK4Q6UW60 755 aa16.5■□□□□ 0.23
HDAC4-215ENST00000543185 TM2D1Q9BX74 207 aa16.5■□□□□ 0.23
HDAC4-215ENST00000543185 LHX8Q68G74 356 aa16.5■□□□□ 0.23
HDAC4-215ENST00000543185 NCOA6Q14686 2063 aaPredicted RBP16.5■□□□□ 0.23
HDAC4-215ENST00000543185 CRPP02741 224 aa16.5■□□□□ 0.23
HDAC4-215ENST00000543185 SLC25A15Q9Y619 301 aa16.5■□□□□ 0.23
HDAC4-215ENST00000543185 DLL3Q9NYJ7 618 aa16.5■□□□□ 0.23
HDAC4-215ENST00000543185 AHRRA9YTQ3 701 aa16.5■□□□□ 0.23
HDAC4-215ENST00000543185 LINC00587B1AMM8 73 aa16.5■□□□□ 0.23
HDAC4-215ENST00000543185 RNFT1Q5M7Z0 435 aa16.5■□□□□ 0.23
HDAC4-215ENST00000543185 FAM90A1Q86YD7 464 aa16.5■□□□□ 0.23
HDAC4-215ENST00000543185 WFDC3Q8IUB2 231 aa16.5■□□□□ 0.23
HDAC4-215ENST00000543185 FAM60AQ9NP50 221 aa16.5■□□□□ 0.23
HDAC4-215ENST00000543185 FAM214BQ7L5A3 538 aa16.49■□□□□ 0.23
HDAC4-215ENST00000543185 A0A0G2JLM5 398 aa16.49■□□□□ 0.23
HDAC4-215ENST00000543185 CT83Q5H943 113 aa16.49■□□□□ 0.23
HDAC4-215ENST00000543185 CGB1A6NKQ9 187 aa16.49■□□□□ 0.23
HDAC4-215ENST00000543185 FOXI3A8MTJ6 420 aaPredicted RBP16.49■□□□□ 0.23
HDAC4-215ENST00000543185 F2Z2F3 143 aa16.49■□□□□ 0.23
HDAC4-215ENST00000543185 WNT2BQ93097 391 aa16.49■□□□□ 0.23
HDAC4-215ENST00000543185 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.49■□□□□ 0.23
HDAC4-215ENST00000543185 ESDP10768 282 aa16.49■□□□□ 0.23
HDAC4-215ENST00000543185 FER1L6-AS1Q8NA97 138 aa16.49■□□□□ 0.23
HDAC4-215ENST00000543185 TMEM86BQ8N661 226 aa16.49■□□□□ 0.23
HDAC4-215ENST00000543185 UNQ5815/PRO19632Q6UWF5 114 aa16.48■□□□□ 0.23
HDAC4-215ENST00000543185 TMEM171Q8WVE6 324 aa16.48■□□□□ 0.23
HDAC4-215ENST00000543185 TTTY12Q9BZ98 90 aa16.48■□□□□ 0.23
HDAC4-215ENST00000543185 TMEM14DPA8MWL7 114 aa16.48■□□□□ 0.23
HDAC4-215ENST00000543185 UCP1P25874 307 aa16.48■□□□□ 0.23
HDAC4-215ENST00000543185 TRIP6Q15654 476 aaKnown RBP16.48■□□□□ 0.23
HDAC4-215ENST00000543185 FAM57AQ8TBR7 257 aa16.48■□□□□ 0.23
HDAC4-215ENST00000543185 FNDC4Q9H6D8 234 aaPredicted RBP16.48■□□□□ 0.23
HDAC4-215ENST00000543185 IGHV5-10-1A0A0J9YXX1 117 aa16.48■□□□□ 0.23
HDAC4-215ENST00000543185 DCAF10Q5QP82 559 aa16.48■□□□□ 0.23
HDAC4-215ENST00000543185 NDUFA3O95167 84 aa16.48■□□□□ 0.23
HDAC4-215ENST00000543185 IGLV1-36A0A0B4J1U3 117 aa16.48■□□□□ 0.23
HDAC4-215ENST00000543185 DLX4Q92988 240 aaPredicted RBP16.48■□□□□ 0.23
HDAC4-215ENST00000543185 A0A1B0GW64 132 aa16.47■□□□□ 0.23
HDAC4-215ENST00000543185 DENND4CQ5VZ89 1909 aa16.47■□□□□ 0.23
HDAC4-215ENST00000543185 CFAP161Q6P656 301 aa16.47■□□□□ 0.23
HDAC4-215ENST00000543185 NHP2Q9NX24 153 aaKnown RBP16.47■□□□□ 0.23
HDAC4-215ENST00000543185 IGHV1OR15-9A0A0B4J2B8 117 aa16.47■□□□□ 0.23
HDAC4-215ENST00000543185 SSBP3Q9BWW4 388 aaPredicted RBP16.47■□□□□ 0.23
HDAC4-215ENST00000543185 OSTCQ9NRP0 149 aa16.47■□□□□ 0.23
HDAC4-215ENST00000543185 TMEM74BQ9NUR3 256 aa16.47■□□□□ 0.23
HDAC4-215ENST00000543185 SEMA5BQ9P283 1151 aa16.47■□□□□ 0.23
HDAC4-215ENST00000543185 HS3ST3B1Q9Y662 390 aa16.47■□□□□ 0.23
HDAC4-215ENST00000543185 NRXN2Q9P2S2 1712 aa16.47■□□□□ 0.23
HDAC4-215ENST00000543185 IL11P20809 199 aa16.47■□□□□ 0.23
HDAC4-215ENST00000543185 CCL20P78556 96 aa16.47■□□□□ 0.23
HDAC4-215ENST00000543185 HRKO00198 91 aa16.47■□□□□ 0.23
HDAC4-215ENST00000543185 PIMREGQ9BSJ6 248 aa16.47■□□□□ 0.23
HDAC4-215ENST00000543185 NR2C2APQ86WQ0 139 aa16.46■□□□□ 0.23
HDAC4-215ENST00000543185 HILPDAQ9Y5L2 63 aa16.46■□□□□ 0.23
HDAC4-215ENST00000543185 ASPHD2Q6ICH7 369 aa16.46■□□□□ 0.23
HDAC4-215ENST00000543185 MORN3Q6PF18 240 aaPredicted RBP16.46■□□□□ 0.23
HDAC4-215ENST00000543185 FOXA3P55318 350 aaPredicted RBP16.46■□□□□ 0.23
HDAC4-215ENST00000543185 HEPN1Q6WQI6 88 aa16.46■□□□□ 0.23
HDAC4-215ENST00000543185 COQ2Q96H96 371 aa16.46■□□□□ 0.23
HDAC4-215ENST00000543185 HIST1H2BLQ99880 126 aa16.46■□□□□ 0.23
HDAC4-215ENST00000543185 ZNF479Q96JC4 524 aa16.46■□□□□ 0.23
HDAC4-215ENST00000543185 CCL13Q99616 98 aa16.46■□□□□ 0.23
HDAC4-215ENST00000543185 FNDC1Q4ZHG4 1894 aaPredicted RBP16.46■□□□□ 0.23
HDAC4-215ENST00000543185 TNFSF13O75888 250 aa16.46■□□□□ 0.23
HDAC4-215ENST00000543185 ZNF703Q9H7S9 590 aaPredicted RBP16.46■□□□□ 0.23
HDAC4-215ENST00000543185 IL6RP08887 468 aaPredicted RBP16.46■□□□□ 0.22
HDAC4-215ENST00000543185 ZNF815PA8K554 130 aa16.46■□□□□ 0.22
HDAC4-215ENST00000543185 TMEM229AB2RXF0 380 aa16.46■□□□□ 0.22
HDAC4-215ENST00000543185 DUX5Q96PT3 197 aa16.46■□□□□ 0.22
HDAC4-215ENST00000543185 GP6Q9HCN6 339 aa16.46■□□□□ 0.22
HDAC4-215ENST00000543185 TRAV24A0A0B4J272 114 aa16.45■□□□□ 0.22
HDAC4-215ENST00000543185 PSMB11A5LHX3 300 aa16.45■□□□□ 0.22
HDAC4-215ENST00000543185 C9orf172C9J069 976 aa16.45■□□□□ 0.22
HDAC4-215ENST00000543185 SLC25A48Q6ZT89 311 aaKnown RBP16.45■□□□□ 0.22
HDAC4-215ENST00000543185 OTORQ9NRC9 128 aa16.45■□□□□ 0.22
HDAC4-215ENST00000543185 DTX1Q86Y01 620 aa16.45■□□□□ 0.22
HDAC4-215ENST00000543185 C1orf185Q5T7R7 199 aa16.45■□□□□ 0.22
HDAC4-215ENST00000543185 UCNP55089 124 aa16.45■□□□□ 0.22
HDAC4-215ENST00000543185 C16orf47Q6ZP98 133 aaPredicted RBP16.45■□□□□ 0.22
HDAC4-215ENST00000543185 PF4V1P10720 104 aa16.45■□□□□ 0.22
HDAC4-215ENST00000543185 OR52E5Q8NH55 327 aa16.45■□□□□ 0.22
HDAC4-215ENST00000543185 OR5P3Q8WZ94 311 aa16.45■□□□□ 0.22
HDAC4-215ENST00000543185 IGKCP01834 107 aa16.44■□□□□ 0.22
HDAC4-215ENST00000543185 THY1P04216 161 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms