RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 PQLC2Q6ZP29 291 aa10.33□□□□□ -0.76
SFSWAP-208ENST00000539506 LINC00479Q96M42 142 aa10.33□□□□□ -0.76
SFSWAP-208ENST00000539506 TXN2Q99757 166 aa10.33□□□□□ -0.76
SFSWAP-208ENST00000539506 GNG12Q9UBI6 72 aa10.33□□□□□ -0.76
SFSWAP-208ENST00000539506 PLXNB1O43157 2135 aa10.33□□□□□ -0.76
SFSWAP-208ENST00000539506 M0R1X1 148 aa10.33□□□□□ -0.76
SFSWAP-208ENST00000539506 PDE6DO43924 150 aa10.33□□□□□ -0.76
SFSWAP-208ENST00000539506 SPATA45Q537H7 98 aa10.33□□□□□ -0.76
SFSWAP-208ENST00000539506 MMD2Q8IY49 270 aa10.33□□□□□ -0.76
SFSWAP-208ENST00000539506 ST6GALNAC6Q969X2 333 aa10.33□□□□□ -0.76
SFSWAP-208ENST00000539506 PROCRQ9UNN8 238 aa10.33□□□□□ -0.76
SFSWAP-208ENST00000539506 YPEL1O60688 119 aa10.33□□□□□ -0.76
SFSWAP-208ENST00000539506 CHRNB4P30926 498 aa10.33□□□□□ -0.76
SFSWAP-208ENST00000539506 ATP6V1FQ16864 119 aa10.33□□□□□ -0.76
SFSWAP-208ENST00000539506 TMEM183BQ1AE95 376 aa10.33□□□□□ -0.76
SFSWAP-208ENST00000539506 Q6ZN92 141 aa10.33□□□□□ -0.76
SFSWAP-208ENST00000539506 OR4A16Q8NH70 328 aa10.33□□□□□ -0.76
SFSWAP-208ENST00000539506 YPEL2Q96QA6 119 aa10.33□□□□□ -0.76
SFSWAP-208ENST00000539506 HSD17B10Q99714 261 aaKnown RBP10.33□□□□□ -0.76
SFSWAP-208ENST00000539506 TIMM8BQ9Y5J9 83 aaPredicted RBP10.33□□□□□ -0.76
SFSWAP-208ENST00000539506 SPINT2O43291 252 aa10.32□□□□□ -0.76
SFSWAP-208ENST00000539506 CD24P25063 80 aa10.32□□□□□ -0.76
SFSWAP-208ENST00000539506 MIR17HGQ75NE6 70 aa10.32□□□□□ -0.76
SFSWAP-208ENST00000539506 WDR83OSQ9Y284 106 aa10.32□□□□□ -0.76
SFSWAP-208ENST00000539506 ZNF253O75346 499 aa10.32□□□□□ -0.76
SFSWAP-208ENST00000539506 COMPP49747 757 aaPredicted RBP10.32□□□□□ -0.76
SFSWAP-208ENST00000539506 FOXL1Q12952 345 aa10.32□□□□□ -0.76
SFSWAP-208ENST00000539506 CLEC2AQ6UVW9 174 aa10.32□□□□□ -0.76
SFSWAP-208ENST00000539506 OR2V2Q96R30 315 aa10.32□□□□□ -0.76
SFSWAP-208ENST00000539506 SRIP30626 198 aa10.31□□□□□ -0.76
SFSWAP-208ENST00000539506 GPR6P46095 362 aaPredicted RBP10.31□□□□□ -0.76
SFSWAP-208ENST00000539506 GPR12P47775 334 aa10.31□□□□□ -0.76
SFSWAP-208ENST00000539506 MRPS11P82912 194 aaKnown RBP10.31□□□□□ -0.76
SFSWAP-208ENST00000539506 VHLLQ6RSH7 139 aa10.31□□□□□ -0.76
SFSWAP-208ENST00000539506 UNQ5815/PRO19632Q6UWF5 114 aa10.31□□□□□ -0.76
SFSWAP-208ENST00000539506 MOGAT3Q86VF5 341 aa10.31□□□□□ -0.76
SFSWAP-208ENST00000539506 GGTLC1Q9BX51 225 aa10.31□□□□□ -0.76
SFSWAP-208ENST00000539506 IFI27L2Q9H2X8 130 aa10.31□□□□□ -0.76
SFSWAP-208ENST00000539506 NRN1Q9NPD7 142 aa10.31□□□□□ -0.76
SFSWAP-208ENST00000539506 KCNIP2Q9NS61 270 aa10.31□□□□□ -0.76
SFSWAP-208ENST00000539506 ZNRD1Q9P1U0 126 aa10.31□□□□□ -0.76
SFSWAP-208ENST00000539506 CBY1Q9Y3M2 126 aa10.31□□□□□ -0.76
SFSWAP-208ENST00000539506 FAM215AQ9Y5M1 114 aa10.31□□□□□ -0.76
SFSWAP-208ENST00000539506 TET2Q6N021 2002 aaPredicted RBP10.31□□□□□ -0.76
SFSWAP-208ENST00000539506 K7EM74 188 aa10.31□□□□□ -0.76
SFSWAP-208ENST00000539506 ADH4P08319 380 aa10.31□□□□□ -0.76
SFSWAP-208ENST00000539506 IGFBP2P18065 325 aa10.31□□□□□ -0.76
SFSWAP-208ENST00000539506 GNG10P50151 68 aa10.31□□□□□ -0.76
SFSWAP-208ENST00000539506 PSG5Q15238 335 aa10.31□□□□□ -0.76
SFSWAP-208ENST00000539506 DSCAMO60469 2012 aa10.31□□□□□ -0.76
SFSWAP-208ENST00000539506 MBD3L4A6NDZ8 208 aaPredicted RBP10.31□□□□□ -0.76
SFSWAP-208ENST00000539506 MBD3L3A6NE82 208 aaPredicted RBP10.31□□□□□ -0.76
SFSWAP-208ENST00000539506 MBD3L5A6NJ08 208 aaPredicted RBP10.31□□□□□ -0.76
SFSWAP-208ENST00000539506 M0R1B8 84 aa10.31□□□□□ -0.76
SFSWAP-208ENST00000539506 GCHFRP30047 84 aa10.31□□□□□ -0.76
SFSWAP-208ENST00000539506 CR1LQ2VPA4 569 aa10.31□□□□□ -0.76
SFSWAP-208ENST00000539506 MBD3L2Q8NHZ7 208 aaPredicted RBP10.31□□□□□ -0.76
SFSWAP-208ENST00000539506 FAM168AQ92567 244 aa10.31□□□□□ -0.76
SFSWAP-208ENST00000539506 C1orf159Q96HA4 380 aa10.31□□□□□ -0.76
SFSWAP-208ENST00000539506 PKDREJQ9NTG1 2253 aa10.31□□□□□ -0.76
SFSWAP-208ENST00000539506 YLPM1P49750 1951 aaKnown RBP10.3□□□□□ -0.76
SFSWAP-208ENST00000539506 SPRY3O43610 288 aa10.3□□□□□ -0.76
SFSWAP-208ENST00000539506 LHBP01229 141 aa10.3□□□□□ -0.76
SFSWAP-208ENST00000539506 IL6RP08887 468 aaPredicted RBP10.3□□□□□ -0.76
SFSWAP-208ENST00000539506 SUMO1P63165 101 aaKnown RBP10.3□□□□□ -0.76
SFSWAP-208ENST00000539506 TCTEX1D1Q8N7M0 179 aa10.3□□□□□ -0.76
SFSWAP-208ENST00000539506 MCRIP2Q9BUT9 160 aaKnown RBP10.3□□□□□ -0.76
SFSWAP-208ENST00000539506 CEACAM4O75871 244 aa10.3□□□□□ -0.76
SFSWAP-208ENST00000539506 EFNB3Q15768 340 aa10.3□□□□□ -0.76
SFSWAP-208ENST00000539506 CENPWQ5EE01 88 aa10.3□□□□□ -0.76
SFSWAP-208ENST00000539506 PRR27Q6MZM9 219 aa10.3□□□□□ -0.76
SFSWAP-208ENST00000539506 TEX43Q6ZNM6 134 aa10.3□□□□□ -0.76
SFSWAP-208ENST00000539506 STPG3Q8N7X2 389 aa10.3□□□□□ -0.76
SFSWAP-208ENST00000539506 IL36BQ9NZH7 164 aa10.3□□□□□ -0.76
SFSWAP-208ENST00000539506 A0A1W2PN81 502 aa10.29□□□□□ -0.76
SFSWAP-208ENST00000539506 PRSS46E5RG02 174 aa10.29□□□□□ -0.76
SFSWAP-208ENST00000539506 OR7C2O60412 319 aa10.29□□□□□ -0.76
SFSWAP-208ENST00000539506 CGB3P0DN86 165 aa10.29□□□□□ -0.76
SFSWAP-208ENST00000539506 CGB7P0DN87 165 aa10.29□□□□□ -0.76
SFSWAP-208ENST00000539506 VDAC2P45880 294 aaPredicted RBP10.29□□□□□ -0.76
SFSWAP-208ENST00000539506 PMCHL1Q16048 86 aa10.29□□□□□ -0.76
SFSWAP-208ENST00000539506 RNF151Q2KHN1 245 aa10.29□□□□□ -0.76
SFSWAP-208ENST00000539506 C17orf58Q2M2W7 97 aa10.29□□□□□ -0.76
SFSWAP-208ENST00000539506 SSBP4Q9BWG4 385 aaPredicted RBP10.29□□□□□ -0.76
SFSWAP-208ENST00000539506 RNF24Q9Y225 148 aa10.29□□□□□ -0.76
SFSWAP-208ENST00000539506 TANC2Q9HCD6 1990 aa10.29□□□□□ -0.76
SFSWAP-208ENST00000539506 PLCE1Q9P212 2302 aa10.29□□□□□ -0.76
SFSWAP-208ENST00000539506 LOC102724200A0A096LPH7 203 aaPredicted RBP10.29□□□□□ -0.76
SFSWAP-208ENST00000539506 MGST3O14880 152 aa10.29□□□□□ -0.76
SFSWAP-208ENST00000539506 TMPRSS2O15393 492 aa10.29□□□□□ -0.76
SFSWAP-208ENST00000539506 GPX1P07203 203 aa10.29□□□□□ -0.76
SFSWAP-208ENST00000539506 STAG3L2P0CL84 134 aa10.29□□□□□ -0.76
SFSWAP-208ENST00000539506 STAG3L3P0CL85 134 aa10.29□□□□□ -0.76
SFSWAP-208ENST00000539506 CFHR2P36980 270 aa10.29□□□□□ -0.76
SFSWAP-208ENST00000539506 RELBQ01201 579 aa10.29□□□□□ -0.76
SFSWAP-208ENST00000539506 RPEL1Q2QD12 228 aa10.29□□□□□ -0.76
SFSWAP-208ENST00000539506 RNASE8Q8TDE3 154 aaKnown RBP10.29□□□□□ -0.76
SFSWAP-208ENST00000539506 ITLN1Q8WWA0 313 aa10.29□□□□□ -0.76
SFSWAP-208ENST00000539506 EAF1Q96JC9 268 aaPredicted RBP10.29□□□□□ -0.76
SFSWAP-208ENST00000539506 SVEP1Q4LDE5 3571 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms