RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 CDSNQ15517 529 aa11.35□□□□□ -0.59
LIMK1-208ENST00000538333 SPATA31B1PQ5VZV4 182 aa11.35□□□□□ -0.59
LIMK1-208ENST00000538333 MUC15Q8N387 334 aa11.35□□□□□ -0.59
LIMK1-208ENST00000538333 OR4A5Q8NH83 315 aa11.35□□□□□ -0.59
LIMK1-208ENST00000538333 TXNDC17Q9BRA2 123 aa11.35□□□□□ -0.59
LIMK1-208ENST00000538333 WASHC3Q9Y3C0 194 aa11.35□□□□□ -0.59
LIMK1-208ENST00000538333 CGB1A6NKQ9 187 aa11.34□□□□□ -0.59
LIMK1-208ENST00000538333 LYNX1G3V0Z9 82 aa11.34□□□□□ -0.59
LIMK1-208ENST00000538333 FSTL3O95633 263 aa11.34□□□□□ -0.59
LIMK1-208ENST00000538333 LYNX1P0DP58 116 aa11.34□□□□□ -0.59
LIMK1-208ENST00000538333 COL8A2P25067 703 aa11.34□□□□□ -0.59
LIMK1-208ENST00000538333 RHOBP62745 196 aa11.34□□□□□ -0.59
LIMK1-208ENST00000538333 ADORA2A-AS1P86434 159 aa11.34□□□□□ -0.59
LIMK1-208ENST00000538333 CST9LP1Q5W188 147 aa11.34□□□□□ -0.59
LIMK1-208ENST00000538333 ZNF841Q6ZN19 808 aa11.34□□□□□ -0.59
LIMK1-208ENST00000538333 COMMD5Q9GZQ3 224 aa11.34□□□□□ -0.59
LIMK1-208ENST00000538333 TMEM133Q9H2Q1 129 aa11.34□□□□□ -0.59
LIMK1-208ENST00000538333 F6UZH7 168 aa11.34□□□□□ -0.59
LIMK1-208ENST00000538333 TRGC2P03986 189 aa11.34□□□□□ -0.59
LIMK1-208ENST00000538333 S100A8P05109 93 aa11.34□□□□□ -0.59
LIMK1-208ENST00000538333 GCHFRP30047 84 aa11.34□□□□□ -0.59
LIMK1-208ENST00000538333 GAMTQ14353 236 aa11.34□□□□□ -0.59
LIMK1-208ENST00000538333 ZNF672Q499Z4 452 aaPredicted RBP11.34□□□□□ -0.59
LIMK1-208ENST00000538333 TGIF2LXQ8IUE1 241 aa11.34□□□□□ -0.59
LIMK1-208ENST00000538333 VSTM2AQ8TAG5 236 aa11.34□□□□□ -0.59
LIMK1-208ENST00000538333 PYGO2Q9BRQ0 406 aa11.34□□□□□ -0.59
LIMK1-208ENST00000538333 DOK5Q9P104 306 aa11.34□□□□□ -0.59
LIMK1-208ENST00000538333 SPTA1P02549 2419 aa11.33□□□□□ -0.6
LIMK1-208ENST00000538333 PHOX2AO14813 284 aa11.33□□□□□ -0.6
LIMK1-208ENST00000538333 HIST1H2BKO60814 126 aa11.33□□□□□ -0.6
LIMK1-208ENST00000538333 HIST1H2BJP06899 126 aa11.33□□□□□ -0.6
LIMK1-208ENST00000538333 HIST1H2BOP23527 126 aa11.33□□□□□ -0.6
LIMK1-208ENST00000538333 HIST1H2BBP33778 126 aa11.33□□□□□ -0.6
LIMK1-208ENST00000538333 HIST1H2BDP58876 126 aa11.33□□□□□ -0.6
LIMK1-208ENST00000538333 HIST1H2BCP62807 126 aa11.33□□□□□ -0.6
LIMK1-208ENST00000538333 CD69Q07108 199 aa11.33□□□□□ -0.6
LIMK1-208ENST00000538333 MLANAQ16655 118 aa11.33□□□□□ -0.6
LIMK1-208ENST00000538333 HIST2H2BEQ16778 126 aa11.33□□□□□ -0.6
LIMK1-208ENST00000538333 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.33□□□□□ -0.6
LIMK1-208ENST00000538333 HIST1H2BHQ93079 126 aa11.33□□□□□ -0.6
LIMK1-208ENST00000538333 HIST1H2BNQ99877 126 aa11.33□□□□□ -0.6
LIMK1-208ENST00000538333 HIST1H2BMQ99879 126 aa11.33□□□□□ -0.6
LIMK1-208ENST00000538333 DERL1Q9BUN8 251 aa11.33□□□□□ -0.6
LIMK1-208ENST00000538333 RALYQ9UKM9 306 aaKnown RBP11.33□□□□□ -0.6
LIMK1-208ENST00000538333 MALRD1Q5VYJ5 2156 aa11.33□□□□□ -0.6
LIMK1-208ENST00000538333 NDUFB4O95168 129 aa11.33□□□□□ -0.6
LIMK1-208ENST00000538333 IGHV2-70P01814 119 aa11.33□□□□□ -0.6
LIMK1-208ENST00000538333 MRGPRG-AS1Q2M3A8 158 aa11.33□□□□□ -0.6
LIMK1-208ENST00000538333 LINC01551Q86U37 167 aa11.33□□□□□ -0.6
LIMK1-208ENST00000538333 NANPQ8TBE9 248 aa11.33□□□□□ -0.6
LIMK1-208ENST00000538333 ZNF430Q9H8G1 570 aaPredicted RBP11.33□□□□□ -0.6
LIMK1-208ENST00000538333 YTHDF2Q9Y5A9 579 aaKnown RBP11.33□□□□□ -0.6
LIMK1-208ENST00000538333 ANKHD1Q8IWZ3 2542 aaKnown RBP11.33□□□□□ -0.6
LIMK1-208ENST00000538333 H7BYZ3 331 aa11.32□□□□□ -0.6
LIMK1-208ENST00000538333 TGOLN2O43493 480 aa11.32□□□□□ -0.6
LIMK1-208ENST00000538333 FOXH1O75593 365 aa11.32□□□□□ -0.6
LIMK1-208ENST00000538333 HOXA5P20719 270 aa11.32□□□□□ -0.6
LIMK1-208ENST00000538333 WT1-ASQ06250 92 aa11.32□□□□□ -0.6
LIMK1-208ENST00000538333 TNFRSF14Q92956 283 aa11.32□□□□□ -0.6
LIMK1-208ENST00000538333 ANAPC16Q96DE5 110 aa11.32□□□□□ -0.6
LIMK1-208ENST00000538333 RITA1Q96K30 269 aa11.32□□□□□ -0.6
LIMK1-208ENST00000538333 TMEM204Q9BSN7 226 aa11.32□□□□□ -0.6
LIMK1-208ENST00000538333 A0A1W2PN81 502 aa11.31□□□□□ -0.6
LIMK1-208ENST00000538333 CLN5O75503 358 aa11.31□□□□□ -0.6
LIMK1-208ENST00000538333 IGLV1-47P01700 117 aa11.31□□□□□ -0.6
LIMK1-208ENST00000538333 MC5RP33032 325 aa11.31□□□□□ -0.6
LIMK1-208ENST00000538333 CHRNA7P36544 502 aa11.31□□□□□ -0.6
LIMK1-208ENST00000538333 PPOXP50336 477 aa11.31□□□□□ -0.6
LIMK1-208ENST00000538333 ERHP84090 104 aaKnown RBP11.31□□□□□ -0.6
LIMK1-208ENST00000538333 C10orf55Q5SWW7 151 aa11.31□□□□□ -0.6
LIMK1-208ENST00000538333 CACNG8Q8WXS5 425 aa11.31□□□□□ -0.6
LIMK1-208ENST00000538333 PLXNB1O43157 2135 aa11.31□□□□□ -0.6
LIMK1-208ENST00000538333 NAV3Q8IVL0 2385 aa11.31□□□□□ -0.6
LIMK1-208ENST00000538333 TRBV20OR9-2A0A075B6H5 130 aa11.31□□□□□ -0.6
LIMK1-208ENST00000538333 IGHV2-26A0A0B4J1V2 119 aa11.31□□□□□ -0.6
LIMK1-208ENST00000538333 SMIM6P0DI80 62 aa11.31□□□□□ -0.6
LIMK1-208ENST00000538333 OR10J1P30954 320 aa11.31□□□□□ -0.6
LIMK1-208ENST00000538333 GPX4P36969 197 aaPredicted RBP11.31□□□□□ -0.6
LIMK1-208ENST00000538333 DLX1P56177 255 aa11.31□□□□□ -0.6
LIMK1-208ENST00000538333 FAM78BQ5VT40 261 aa11.31□□□□□ -0.6
LIMK1-208ENST00000538333 MIR17HGQ75NE6 70 aa11.31□□□□□ -0.6
LIMK1-208ENST00000538333 OR4P4Q8NGL7 312 aa11.31□□□□□ -0.6
LIMK1-208ENST00000538333 SLC35E1Q96K37 410 aa11.31□□□□□ -0.6
LIMK1-208ENST00000538333 ELOVL1Q9BW60 279 aa11.31□□□□□ -0.6
LIMK1-208ENST00000538333 TPSG1Q9NRR2 321 aa11.31□□□□□ -0.6
LIMK1-208ENST00000538333 ABCA4P78363 2273 aa11.3□□□□□ -0.6
LIMK1-208ENST00000538333 TPRP12270 2363 aaKnown RBP11.3□□□□□ -0.6
LIMK1-208ENST00000538333 SCO2A0A1W2PP80 73 aa11.3□□□□□ -0.6
LIMK1-208ENST00000538333 SLC25A17O43808 307 aa11.3□□□□□ -0.6
LIMK1-208ENST00000538333 GATA2P23769 480 aaPredicted RBP11.3□□□□□ -0.6
LIMK1-208ENST00000538333 IL3RAP26951 378 aa11.3□□□□□ -0.6
LIMK1-208ENST00000538333 GALR1P47211 349 aa11.3□□□□□ -0.6
LIMK1-208ENST00000538333 HLA-DRB5Q30154 266 aa11.3□□□□□ -0.6
LIMK1-208ENST00000538333 SLC16A13Q7RTY0 426 aa11.3□□□□□ -0.6
LIMK1-208ENST00000538333 PNKDQ8N490 385 aa11.3□□□□□ -0.6
LIMK1-208ENST00000538333 ZNF114Q8NC26 417 aa11.3□□□□□ -0.6
LIMK1-208ENST00000538333 NECAP1Q8NC96 275 aa11.3□□□□□ -0.6
LIMK1-208ENST00000538333 FRZBQ92765 325 aa11.3□□□□□ -0.6
LIMK1-208ENST00000538333 FUT9Q9Y231 359 aa11.3□□□□□ -0.6
LIMK1-208ENST00000538333 IFITM10A6NMD0 228 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms