RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 A0A0A6YYH2 397 aa9.55□□□□□ -0.88
TNFRSF1A-207ENST00000535958 A6NJ64 397 aa9.55□□□□□ -0.88
TNFRSF1A-207ENST00000535958 FGF9P31371 208 aaPredicted RBP9.55□□□□□ -0.88
TNFRSF1A-207ENST00000535958 ADMP35318 185 aa9.55□□□□□ -0.88
TNFRSF1A-207ENST00000535958 SCAND1P57086 179 aa9.55□□□□□ -0.88
TNFRSF1A-207ENST00000535958 CMTM1Q8IZ96 169 aa9.55□□□□□ -0.88
TNFRSF1A-207ENST00000535958 RNF2Q99496 336 aa9.55□□□□□ -0.88
TNFRSF1A-207ENST00000535958 TSC22D3Q99576 134 aa9.55□□□□□ -0.88
TNFRSF1A-207ENST00000535958 GINS3Q9BRX5 216 aa9.55□□□□□ -0.88
TNFRSF1A-207ENST00000535958 FKBP11Q9NYL4 201 aa9.55□□□□□ -0.88
TNFRSF1A-207ENST00000535958 SMPXQ9UHP9 88 aa9.55□□□□□ -0.88
TNFRSF1A-207ENST00000535958 IGHV3-49A0A0A0MS15 119 aa9.54□□□□□ -0.88
TNFRSF1A-207ENST00000535958 TRAV14DV4A0A0A6YYC5 116 aa9.54□□□□□ -0.88
TNFRSF1A-207ENST00000535958 DNASE2O00115 360 aaPredicted RBP9.54□□□□□ -0.88
TNFRSF1A-207ENST00000535958 KRASP01116 189 aa9.54□□□□□ -0.88
TNFRSF1A-207ENST00000535958 CD5P06127 495 aa9.54□□□□□ -0.88
TNFRSF1A-207ENST00000535958 F2RP25116 425 aa9.54□□□□□ -0.88
TNFRSF1A-207ENST00000535958 S100GP29377 79 aa9.54□□□□□ -0.88
TNFRSF1A-207ENST00000535958 GABARAPL2P60520 117 aa9.54□□□□□ -0.88
TNFRSF1A-207ENST00000535958 MXD1Q05195 221 aa9.54□□□□□ -0.88
TNFRSF1A-207ENST00000535958 TMEM187Q14656 261 aa9.54□□□□□ -0.88
TNFRSF1A-207ENST00000535958 ZNF124Q15973 351 aa9.54□□□□□ -0.88
TNFRSF1A-207ENST00000535958 IZUMO2Q6UXV1 221 aa9.54□□□□□ -0.88
TNFRSF1A-207ENST00000535958 GBGT1Q8N5D6 347 aa9.54□□□□□ -0.88
TNFRSF1A-207ENST00000535958 OR5AP2Q8NGF4 316 aa9.54□□□□□ -0.88
TNFRSF1A-207ENST00000535958 NRG4Q8WWG1 115 aa9.54□□□□□ -0.88
TNFRSF1A-207ENST00000535958 GIMAP1Q8WWP7 306 aa9.54□□□□□ -0.88
TNFRSF1A-207ENST00000535958 MISP3Q96FF7 219 aa9.54□□□□□ -0.88
TNFRSF1A-207ENST00000535958 NDUFA4L2Q9NRX3 87 aa9.54□□□□□ -0.88
TNFRSF1A-207ENST00000535958 EHFQ9NZC4 300 aa9.54□□□□□ -0.88
TNFRSF1A-207ENST00000535958 PRNDQ9UKY0 176 aa9.54□□□□□ -0.88
TNFRSF1A-207ENST00000535958 NSG2Q9Y328 171 aa9.54□□□□□ -0.88
TNFRSF1A-207ENST00000535958 DNAH10Q8IVF4 4471 aa9.53□□□□□ -0.88
TNFRSF1A-207ENST00000535958 MEIS3P1A6NDR6 274 aa9.53□□□□□ -0.88
TNFRSF1A-207ENST00000535958 ANKRD65E5RJM6 399 aa9.53□□□□□ -0.88
TNFRSF1A-207ENST00000535958 K7EIM0 57 aa9.53□□□□□ -0.88
TNFRSF1A-207ENST00000535958 CHEK1O14757 476 aa9.53□□□□□ -0.88
TNFRSF1A-207ENST00000535958 GNG7O60262 68 aa9.53□□□□□ -0.88
TNFRSF1A-207ENST00000535958 LPAR6P43657 344 aa9.53□□□□□ -0.88
TNFRSF1A-207ENST00000535958 MFAP4P55083 255 aa9.53□□□□□ -0.88
TNFRSF1A-207ENST00000535958 RPL11P62913 178 aaKnown RBP9.53□□□□□ -0.88
TNFRSF1A-207ENST00000535958 IDNKQ5T6J7 187 aa9.53□□□□□ -0.88
TNFRSF1A-207ENST00000535958 ZNF773Q6PK81 442 aa9.53□□□□□ -0.88
TNFRSF1A-207ENST00000535958 OR1P1Q8NH06 330 aa9.53□□□□□ -0.88
TNFRSF1A-207ENST00000535958 FCGR1BQ92637 280 aa9.53□□□□□ -0.88
TNFRSF1A-207ENST00000535958 SLC25A46Q96AG3 418 aa9.53□□□□□ -0.88
TNFRSF1A-207ENST00000535958 IGHV3OR16-13A0A075B7E8 117 aa9.52□□□□□ -0.89
TNFRSF1A-207ENST00000535958 IGHV3-74A0A0B4J1X5 117 aa9.52□□□□□ -0.89
TNFRSF1A-207ENST00000535958 IGLL5B9A064 214 aa9.52□□□□□ -0.89
TNFRSF1A-207ENST00000535958 C11orf94C9JXX5 98 aa9.52□□□□□ -0.89
TNFRSF1A-207ENST00000535958 ST8SIA3O43173 380 aa9.52□□□□□ -0.89
TNFRSF1A-207ENST00000535958 SDC2P34741 201 aa9.52□□□□□ -0.89
TNFRSF1A-207ENST00000535958 G6PCP35575 357 aa9.52□□□□□ -0.89
TNFRSF1A-207ENST00000535958 MFAP2P55001 183 aa9.52□□□□□ -0.89
TNFRSF1A-207ENST00000535958 UBE2UQ5VVX9 321 aa9.52□□□□□ -0.89
TNFRSF1A-207ENST00000535958 TCF24Q7RTU0 167 aa9.52□□□□□ -0.89
TNFRSF1A-207ENST00000535958 STHQ8IWL8 128 aa9.52□□□□□ -0.89
TNFRSF1A-207ENST00000535958 TXN2Q99757 166 aa9.52□□□□□ -0.89
TNFRSF1A-207ENST00000535958 ZNF2Q9BSG1 426 aaPredicted RBP9.52□□□□□ -0.89
TNFRSF1A-207ENST00000535958 TMEM231Q9H6L2 316 aa9.52□□□□□ -0.89
TNFRSF1A-207ENST00000535958 AUNIPQ9H7T9 357 aa9.52□□□□□ -0.89
TNFRSF1A-207ENST00000535958 HECTD4Q9Y4D8 3996 aa9.52□□□□□ -0.89
TNFRSF1A-207ENST00000535958 HERC2O95714 4834 aa9.52□□□□□ -0.89
TNFRSF1A-207ENST00000535958 LOC100506127A0A0U1RQW1 187 aa9.51□□□□□ -0.89
TNFRSF1A-207ENST00000535958 C15orf61A6NNL5 157 aa9.51□□□□□ -0.89
TNFRSF1A-207ENST00000535958 F8W735 103 aaPredicted RBP9.51□□□□□ -0.89
TNFRSF1A-207ENST00000535958 DEFB4AO15263 64 aa9.51□□□□□ -0.89
TNFRSF1A-207ENST00000535958 CTSGP08311 255 aa9.51□□□□□ -0.89
TNFRSF1A-207ENST00000535958 GNRHRP30968 328 aa9.51□□□□□ -0.89
TNFRSF1A-207ENST00000535958 OR5H6Q8NGV6 325 aa9.51□□□□□ -0.89
TNFRSF1A-207ENST00000535958 OR5H2Q8NGV7 314 aa9.51□□□□□ -0.89
TNFRSF1A-207ENST00000535958 OR4A16Q8NH70 328 aa9.51□□□□□ -0.89
TNFRSF1A-207ENST00000535958 FCAMRQ8WWV6 532 aa9.51□□□□□ -0.89
TNFRSF1A-207ENST00000535958 PINX1Q96BK5 328 aaKnown RBP9.51□□□□□ -0.89
TNFRSF1A-207ENST00000535958 DGCR14Q96DF8 476 aaKnown RBP9.51□□□□□ -0.89
TNFRSF1A-207ENST00000535958 SLC25A38Q96DW6 304 aa9.51□□□□□ -0.89
TNFRSF1A-207ENST00000535958 OR10C1Q96KK4 312 aa9.51□□□□□ -0.89
TNFRSF1A-207ENST00000535958 GPR31O00270 319 aa9.5□□□□□ -0.89
TNFRSF1A-207ENST00000535958 XRCC3O43542 346 aa9.5□□□□□ -0.89
TNFRSF1A-207ENST00000535958 PGLYRP1O75594 196 aaPredicted RBP9.5□□□□□ -0.89
TNFRSF1A-207ENST00000535958 DFFBO76075 338 aa9.5□□□□□ -0.89
TNFRSF1A-207ENST00000535958 TAS2R46P59540 309 aa9.5□□□□□ -0.89
TNFRSF1A-207ENST00000535958 MOB3AQ96BX8 217 aa9.5□□□□□ -0.89
TNFRSF1A-207ENST00000535958 NXF2Q9GZY0 626 aaKnown RBP9.5□□□□□ -0.89
TNFRSF1A-207ENST00000535958 RABAC1Q9UI14 185 aa9.5□□□□□ -0.89
TNFRSF1A-207ENST00000535958 SCGB2A1O75556 95 aa9.49□□□□□ -0.89
TNFRSF1A-207ENST00000535958 MT-CO2P00403 227 aa9.49□□□□□ -0.89
TNFRSF1A-207ENST00000535958 PMP2P02689 132 aa9.49□□□□□ -0.89
TNFRSF1A-207ENST00000535958 CLEC2LP0C7M8 214 aa9.49□□□□□ -0.89
TNFRSF1A-207ENST00000535958 NPBWR1P48145 328 aa9.49□□□□□ -0.89
TNFRSF1A-207ENST00000535958 RFX2P48378 723 aa9.49□□□□□ -0.89
TNFRSF1A-207ENST00000535958 DEFB131AP59861 70 aa9.49□□□□□ -0.89
TNFRSF1A-207ENST00000535958 ERHP84090 104 aaKnown RBP9.49□□□□□ -0.89
TNFRSF1A-207ENST00000535958 PRR20EP86478 221 aa9.49□□□□□ -0.89
TNFRSF1A-207ENST00000535958 PRR20CP86479 221 aa9.49□□□□□ -0.89
TNFRSF1A-207ENST00000535958 PRR20DP86480 221 aa9.49□□□□□ -0.89
TNFRSF1A-207ENST00000535958 PRR20BP86481 221 aa9.49□□□□□ -0.89
TNFRSF1A-207ENST00000535958 PRR20AP86496 221 aa9.49□□□□□ -0.89
TNFRSF1A-207ENST00000535958 TMEM41BQ5BJD5 291 aa9.49□□□□□ -0.89
TNFRSF1A-207ENST00000535958 LEMD1Q68G75 181 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms