RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 APCSP02743 223 aa5.44□□□□□ -1.54
USP28-202ENST00000535607 PMCHP20382 165 aa5.44□□□□□ -1.54
USP28-202ENST00000535607 BCL3P20749 454 aa5.44□□□□□ -1.54
USP28-202ENST00000535607 CBLN1P23435 193 aa5.44□□□□□ -1.54
USP28-202ENST00000535607 NPY1RP25929 384 aa5.44□□□□□ -1.54
USP28-202ENST00000535607 CDKN1AP38936 164 aa5.44□□□□□ -1.54
USP28-202ENST00000535607 REG1BP48304 166 aa5.44□□□□□ -1.54
USP28-202ENST00000535607 GNG4P50150 75 aa5.44□□□□□ -1.54
USP28-202ENST00000535607 SELENOVP59797 346 aa5.44□□□□□ -1.54
USP28-202ENST00000535607 CX3CL1P78423 397 aa5.44□□□□□ -1.54
USP28-202ENST00000535607 RHOGP84095 191 aa5.44□□□□□ -1.54
USP28-202ENST00000535607 PMP22Q01453 160 aa5.44□□□□□ -1.54
USP28-202ENST00000535607 RSPO1Q2MKA7 263 aaPredicted RBP5.44□□□□□ -1.54
USP28-202ENST00000535607 KRTAP15-1Q3LI76 137 aa5.44□□□□□ -1.54
USP28-202ENST00000535607 AAED1Q7RTV5 226 aa5.44□□□□□ -1.54
USP28-202ENST00000535607 HAPLN4Q86UW8 402 aa5.44□□□□□ -1.54
USP28-202ENST00000535607 RPS19BP1Q86WX3 136 aaKnown RBP5.44□□□□□ -1.54
USP28-202ENST00000535607 NIT1Q86X76 327 aa5.44□□□□□ -1.54
USP28-202ENST00000535607 FGFRL1Q8N441 504 aa5.44□□□□□ -1.54
USP28-202ENST00000535607 FAM110DQ8TAY7 271 aaPredicted RBP5.44□□□□□ -1.54
USP28-202ENST00000535607 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.44□□□□□ -1.54
USP28-202ENST00000535607 RDH5Q92781 318 aa5.44□□□□□ -1.54
USP28-202ENST00000535607 C11orf52Q96A22 123 aa5.44□□□□□ -1.54
USP28-202ENST00000535607 C19orf24Q9BVV8 132 aa5.44□□□□□ -1.54
USP28-202ENST00000535607 C1QTNF5Q9BXJ0 243 aa5.44□□□□□ -1.54
USP28-202ENST00000535607 PKIBQ9C010 78 aa5.44□□□□□ -1.54
USP28-202ENST00000535607 OR2H1Q9GZK4 316 aa5.44□□□□□ -1.54
USP28-202ENST00000535607 COMMD5Q9GZQ3 224 aa5.44□□□□□ -1.54
USP28-202ENST00000535607 PCNX3Q9H6A9 2034 aa5.44□□□□□ -1.54
USP28-202ENST00000535607 TRAPPC2LQ9UL33 140 aa5.44□□□□□ -1.54
USP28-202ENST00000535607 PPP1R3CQ9UQK1 317 aa5.44□□□□□ -1.54
USP28-202ENST00000535607 WDR83OSQ9Y284 106 aa5.44□□□□□ -1.54
USP28-202ENST00000535607 MPC1Q9Y5U8 109 aa5.44□□□□□ -1.54
USP28-202ENST00000535607 WDFY3Q8IZQ1 3526 aa5.44□□□□□ -1.54
USP28-202ENST00000535607 A0A1W2PRS3 328 aa5.43□□□□□ -1.54
USP28-202ENST00000535607 A0A1W2PS18 150 aa5.43□□□□□ -1.54
USP28-202ENST00000535607 IGLC7A0M8Q6 106 aa5.43□□□□□ -1.54
USP28-202ENST00000535607 EFNA2O43921 213 aa5.43□□□□□ -1.54
USP28-202ENST00000535607 NUPR1O60356 82 aa5.43□□□□□ -1.54
USP28-202ENST00000535607 RAMP3O60896 148 aa5.43□□□□□ -1.54
USP28-202ENST00000535607 NDUFB8O95169 186 aa5.43□□□□□ -1.54
USP28-202ENST00000535607 IGKV1D-33P01593 117 aa5.43□□□□□ -1.54
USP28-202ENST00000535607 IGKV1-33P01594 117 aa5.43□□□□□ -1.54
USP28-202ENST00000535607 IGKV1-5P01602 117 aa5.43□□□□□ -1.54
USP28-202ENST00000535607 STAG3L2P0CL84 134 aa5.43□□□□□ -1.54
USP28-202ENST00000535607 STAG3L3P0CL85 134 aa5.43□□□□□ -1.54
USP28-202ENST00000535607 CCL4P13236 92 aa5.43□□□□□ -1.54
USP28-202ENST00000535607 ZNF32P17041 273 aa5.43□□□□□ -1.54
USP28-202ENST00000535607 SRD5A2P31213 254 aa5.43□□□□□ -1.54
USP28-202ENST00000535607 HINT1P49773 126 aaPredicted RBP5.43□□□□□ -1.54
USP28-202ENST00000535607 TAS2R45P59539 299 aa5.43□□□□□ -1.54
USP28-202ENST00000535607 UBE2G1P62253 170 aa5.43□□□□□ -1.54
USP28-202ENST00000535607 OCIAD2Q56VL3 154 aa5.43□□□□□ -1.54
USP28-202ENST00000535607 DMRTC1Q5HYR2 192 aa5.43□□□□□ -1.54
USP28-202ENST00000535607 MRPL54Q6P161 138 aaKnown RBP5.43□□□□□ -1.54
USP28-202ENST00000535607 MUC15Q8N387 334 aa5.43□□□□□ -1.54
USP28-202ENST00000535607 ZNF645Q8N7E2 425 aa5.43□□□□□ -1.54
USP28-202ENST00000535607 ZNF439Q8NDP4 499 aa5.43□□□□□ -1.54
USP28-202ENST00000535607 NFAM1Q8NET5 270 aaPredicted RBP5.43□□□□□ -1.54
USP28-202ENST00000535607 OR2Y1Q8NGV0 311 aa5.43□□□□□ -1.54
USP28-202ENST00000535607 OCC1Q8TAD7 63 aa5.43□□□□□ -1.54
USP28-202ENST00000535607 ZNF596Q8TC21 504 aa5.43□□□□□ -1.54
USP28-202ENST00000535607 IL1F10Q8WWZ1 152 aa5.43□□□□□ -1.54
USP28-202ENST00000535607 TMEM45BQ96B21 275 aa5.43□□□□□ -1.54
USP28-202ENST00000535607 RNF125Q96EQ8 232 aa5.43□□□□□ -1.54
USP28-202ENST00000535607 SPRY4Q9C004 299 aa5.43□□□□□ -1.54
USP28-202ENST00000535607 TMEM191AQ9H0A3 160 aa5.43□□□□□ -1.54
USP28-202ENST00000535607 CSTL1Q9H114 145 aa5.43□□□□□ -1.54
USP28-202ENST00000535607 GNB4Q9HAV0 340 aa5.43□□□□□ -1.54
USP28-202ENST00000535607 SH2D2AQ9NP31 389 aa5.43□□□□□ -1.54
USP28-202ENST00000535607 C1RLQ9NZP8 487 aa5.43□□□□□ -1.54
USP28-202ENST00000535607 PEF1Q9UBV8 284 aaKnown RBP5.43□□□□□ -1.54
USP28-202ENST00000535607 SLC25A10Q9UBX3 287 aaPredicted RBP5.43□□□□□ -1.54
USP28-202ENST00000535607 CLN8Q9UBY8 286 aa5.43□□□□□ -1.54
USP28-202ENST00000535607 IL19Q9UHD0 177 aa5.43□□□□□ -1.54
USP28-202ENST00000535607 POLDIP2Q9Y2S7 368 aa5.43□□□□□ -1.54
USP28-202ENST00000535607 CEP250Q9BV73 2442 aa5.43□□□□□ -1.54
USP28-202ENST00000535607 PCNX2A6NKB5 2137 aa5.42□□□□□ -1.54
USP28-202ENST00000535607 A0A0G2JRQ6 117 aa5.42□□□□□ -1.54
USP28-202ENST00000535607 C5orf63A6NC05 138 aa5.42□□□□□ -1.54
USP28-202ENST00000535607 IZUMO1RA6ND01 250 aa5.42□□□□□ -1.54
USP28-202ENST00000535607 HELTA6NFD8 242 aa5.42□□□□□ -1.54
USP28-202ENST00000535607 FNDC10F2Z333 226 aa5.42□□□□□ -1.54
USP28-202ENST00000535607 M0R2Z0 102 aa5.42□□□□□ -1.54
USP28-202ENST00000535607 ISLRO14498 428 aa5.42□□□□□ -1.54
USP28-202ENST00000535607 SH2D1BO14796 132 aa5.42□□□□□ -1.54
USP28-202ENST00000535607 CD5LO43866 347 aa5.42□□□□□ -1.54
USP28-202ENST00000535607 CRYAAP02489 173 aa5.42□□□□□ -1.54
USP28-202ENST00000535607 OR5AL1P0C617 328 aa5.42□□□□□ -1.54
USP28-202ENST00000535607 C3orf79P0CE67 100 aa5.42□□□□□ -1.54
USP28-202ENST00000535607 TMEM11P17152 192 aa5.42□□□□□ -1.54
USP28-202ENST00000535607 ATP5G3P48201 142 aa5.42□□□□□ -1.54
USP28-202ENST00000535607 COMPP49747 757 aaPredicted RBP5.42□□□□□ -1.54
USP28-202ENST00000535607 ATP5IP56385 69 aaPredicted RBP5.42□□□□□ -1.54
USP28-202ENST00000535607 CLDN18P56856 261 aa5.42□□□□□ -1.54
USP28-202ENST00000535607 ERVK-16P61578 105 aa5.42□□□□□ -1.54
USP28-202ENST00000535607 GNG3P63215 75 aa5.42□□□□□ -1.54
USP28-202ENST00000535607 ARF1P84077 181 aaKnown RBP5.42□□□□□ -1.54
USP28-202ENST00000535607 PSG4Q00888 419 aa5.42□□□□□ -1.54
USP28-202ENST00000535607 OR4A47Q6IF82 309 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms