RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 CHRNB4P30926 498 aa12.46□□□□□ -0.41
CACNA1E-208ENST00000533229 CHRNA7P36544 502 aa12.46□□□□□ -0.41
CACNA1E-208ENST00000533229 ANAPC16Q96DE5 110 aa12.46□□□□□ -0.41
CACNA1E-208ENST00000533229 HARBI1Q96MB7 349 aa12.46□□□□□ -0.41
CACNA1E-208ENST00000533229 SCO2A0A1W2PP80 73 aa12.46□□□□□ -0.42
CACNA1E-208ENST00000533229 A0A1W2PPQ1 181 aa12.46□□□□□ -0.42
CACNA1E-208ENST00000533229 C1QTNF9P0C862 333 aa12.46□□□□□ -0.42
CACNA1E-208ENST00000533229 GATA2P23769 480 aaPredicted RBP12.46□□□□□ -0.42
CACNA1E-208ENST00000533229 OR5B12Q96R08 314 aa12.46□□□□□ -0.42
CACNA1E-208ENST00000533229 TLN1Q9Y490 2541 aaKnown RBP12.45□□□□□ -0.42
CACNA1E-208ENST00000533229 TGOLN2O43493 480 aa12.45□□□□□ -0.42
CACNA1E-208ENST00000533229 NDUFB3O43676 98 aa12.45□□□□□ -0.42
CACNA1E-208ENST00000533229 RNASE2P10153 161 aaKnown RBP12.45□□□□□ -0.42
CACNA1E-208ENST00000533229 LOXP28300 417 aaPredicted RBP12.45□□□□□ -0.42
CACNA1E-208ENST00000533229 GCHFRP30047 84 aa12.45□□□□□ -0.42
CACNA1E-208ENST00000533229 GAMTQ14353 236 aa12.45□□□□□ -0.42
CACNA1E-208ENST00000533229 OR5B3Q8NH48 314 aa12.45□□□□□ -0.42
CACNA1E-208ENST00000533229 OSR1Q8TAX0 266 aaPredicted RBP12.45□□□□□ -0.42
CACNA1E-208ENST00000533229 SLC45A2Q9UMX9 530 aa12.45□□□□□ -0.42
CACNA1E-208ENST00000533229 PPP1R2P9O14990 202 aa12.44□□□□□ -0.42
CACNA1E-208ENST00000533229 ACTL6BO94805 426 aa12.44□□□□□ -0.42
CACNA1E-208ENST00000533229 FAM3BP58499 235 aaPredicted RBP12.44□□□□□ -0.42
CACNA1E-208ENST00000533229 RHOBP62745 196 aa12.44□□□□□ -0.42
CACNA1E-208ENST00000533229 RAB31Q13636 194 aa12.44□□□□□ -0.42
CACNA1E-208ENST00000533229 C2orf83Q53S99 150 aa12.44□□□□□ -0.42
CACNA1E-208ENST00000533229 LRRC10Q5BKY1 277 aa12.44□□□□□ -0.42
CACNA1E-208ENST00000533229 MIR17HGQ75NE6 70 aa12.44□□□□□ -0.42
CACNA1E-208ENST00000533229 TMEM144Q7Z5S9 345 aa12.44□□□□□ -0.42
CACNA1E-208ENST00000533229 OR4P4Q8NGL7 312 aa12.44□□□□□ -0.42
CACNA1E-208ENST00000533229 PRDM13Q9H4Q3 707 aa12.44□□□□□ -0.42
CACNA1E-208ENST00000533229 NDUFA4L2Q9NRX3 87 aa12.44□□□□□ -0.42
CACNA1E-208ENST00000533229 FNDC10F2Z333 226 aa12.44□□□□□ -0.42
CACNA1E-208ENST00000533229 F6UZH7 168 aa12.44□□□□□ -0.42
CACNA1E-208ENST00000533229 DLX6P56179 175 aa12.44□□□□□ -0.42
CACNA1E-208ENST00000533229 TMEM177Q53S58 311 aa12.44□□□□□ -0.42
CACNA1E-208ENST00000533229 FAM78BQ5VT40 261 aa12.44□□□□□ -0.42
CACNA1E-208ENST00000533229 OR10X1Q8NGY0 326 aa12.44□□□□□ -0.42
CACNA1E-208ENST00000533229 ST6GALNAC6Q969X2 333 aa12.44□□□□□ -0.42
CACNA1E-208ENST00000533229 FLYWCH2Q96CP2 140 aaKnown RBP12.44□□□□□ -0.42
CACNA1E-208ENST00000533229 PFDN5Q99471 154 aa12.44□□□□□ -0.42
CACNA1E-208ENST00000533229 DYNLRB1Q9NP97 96 aa12.44□□□□□ -0.42
CACNA1E-208ENST00000533229 PPP5D1E7EU14 171 aa12.43□□□□□ -0.42
CACNA1E-208ENST00000533229 PLAUP00749 431 aa12.43□□□□□ -0.42
CACNA1E-208ENST00000533229 APOA2P02652 100 aa12.43□□□□□ -0.42
CACNA1E-208ENST00000533229 C11orf42Q8N5U0 333 aa12.43□□□□□ -0.42
CACNA1E-208ENST00000533229 NABP2Q9BQ15 211 aa12.43□□□□□ -0.42
CACNA1E-208ENST00000533229 FKBP11Q9NYL4 201 aa12.43□□□□□ -0.42
CACNA1E-208ENST00000533229 CGB1A6NKQ9 187 aa12.43□□□□□ -0.42
CACNA1E-208ENST00000533229 GGCTO75223 188 aaKnown RBP12.43□□□□□ -0.42
CACNA1E-208ENST00000533229 FABP4P15090 132 aa12.43□□□□□ -0.42
CACNA1E-208ENST00000533229 RPL8P62917 257 aaKnown RBP12.43□□□□□ -0.42
CACNA1E-208ENST00000533229 OR1L8Q8NGR8 309 aa12.43□□□□□ -0.42
CACNA1E-208ENST00000533229 OR9G1Q8NH87 305 aa12.43□□□□□ -0.42
CACNA1E-208ENST00000533229 RITA1Q96K30 269 aa12.43□□□□□ -0.42
CACNA1E-208ENST00000533229 TXNDC17Q9BRA2 123 aa12.43□□□□□ -0.42
CACNA1E-208ENST00000533229 VSTM5A8MXK1 200 aa12.42□□□□□ -0.42
CACNA1E-208ENST00000533229 OR10J1P30954 320 aa12.42□□□□□ -0.42
CACNA1E-208ENST00000533229 DLX1P56177 255 aa12.42□□□□□ -0.42
CACNA1E-208ENST00000533229 PRSS8Q16651 343 aa12.42□□□□□ -0.42
CACNA1E-208ENST00000533229 C10orf55Q5SWW7 151 aa12.42□□□□□ -0.42
CACNA1E-208ENST00000533229 SSX8Q7RTT4 187 aa12.42□□□□□ -0.42
CACNA1E-208ENST00000533229 OR2T10Q8NGZ9 312 aa12.42□□□□□ -0.42
CACNA1E-208ENST00000533229 ZNF596Q8TC21 504 aa12.42□□□□□ -0.42
CACNA1E-208ENST00000533229 ZNF503Q96F45 646 aa12.42□□□□□ -0.42
CACNA1E-208ENST00000533229 COMMD5Q9GZQ3 224 aa12.42□□□□□ -0.42
CACNA1E-208ENST00000533229 KAAG1Q9UBP8 84 aa12.42□□□□□ -0.42
CACNA1E-208ENST00000533229 ELOA3CA0A087WX78 387 aaPredicted RBP12.41□□□□□ -0.42
CACNA1E-208ENST00000533229 GATCO43716 136 aaKnown RBP12.41□□□□□ -0.42
CACNA1E-208ENST00000533229 IGLV2-23P01705 113 aa12.41□□□□□ -0.42
CACNA1E-208ENST00000533229 HNF1AP20823 631 aa12.41□□□□□ -0.42
CACNA1E-208ENST00000533229 OR4C13Q8NGP0 309 aa12.41□□□□□ -0.42
CACNA1E-208ENST00000533229 OR2T6Q8NHC8 308 aa12.41□□□□□ -0.42
CACNA1E-208ENST00000533229 OCC1Q8TAD7 63 aa12.41□□□□□ -0.42
CACNA1E-208ENST00000533229 VKORC1Q9BQB6 163 aa12.41□□□□□ -0.42
CACNA1E-208ENST00000533229 NGBQ9NPG2 151 aa12.41□□□□□ -0.42
CACNA1E-208ENST00000533229 IGHV1-69-2A0A0G2JMI3 117 aa12.41□□□□□ -0.42
CACNA1E-208ENST00000533229 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.41□□□□□ -0.42
CACNA1E-208ENST00000533229 LYNX1G3V0Z9 82 aa12.41□□□□□ -0.42
CACNA1E-208ENST00000533229 LYNX1P0DP58 116 aa12.41□□□□□ -0.42
CACNA1E-208ENST00000533229 GPX4P36969 197 aaPredicted RBP12.41□□□□□ -0.42
CACNA1E-208ENST00000533229 SRP14P37108 136 aaKnown RBP12.41□□□□□ -0.42
CACNA1E-208ENST00000533229 WT1-ASQ06250 92 aa12.41□□□□□ -0.42
CACNA1E-208ENST00000533229 CD69Q07108 199 aa12.41□□□□□ -0.42
CACNA1E-208ENST00000533229 TMEM155Q4W5P6 130 aa12.41□□□□□ -0.42
CACNA1E-208ENST00000533229 LINC00311Q8N616 119 aa12.41□□□□□ -0.42
CACNA1E-208ENST00000533229 LINC01560Q8TB33 94 aa12.41□□□□□ -0.42
CACNA1E-208ENST00000533229 TMEM186Q96B77 213 aa12.41□□□□□ -0.42
CACNA1E-208ENST00000533229 FUT9Q9Y231 359 aa12.41□□□□□ -0.42
CACNA1E-208ENST00000533229 IGHV1-8P0DP01 117 aa12.4□□□□□ -0.42
CACNA1E-208ENST00000533229 CD99P14209 185 aa12.4□□□□□ -0.42
CACNA1E-208ENST00000533229 APOBEC3AP31941 199 aaPredicted RBP12.4□□□□□ -0.42
CACNA1E-208ENST00000533229 PRB3Q04118 309 aaPredicted RBP12.4□□□□□ -0.42
CACNA1E-208ENST00000533229 UNQ6494/PRO21346Q6UXR6 183 aa12.4□□□□□ -0.42
CACNA1E-208ENST00000533229 TMEM167AQ8TBQ9 72 aa12.4□□□□□ -0.42
CACNA1E-208ENST00000533229 SFRP2Q96HF1 295 aa12.4□□□□□ -0.42
CACNA1E-208ENST00000533229 TPSG1Q9NRR2 321 aa12.4□□□□□ -0.42
CACNA1E-208ENST00000533229 PTPRQQ9UMZ3 2332 aa12.4□□□□□ -0.42
CACNA1E-208ENST00000533229 A0A087X0M5 115 aa12.4□□□□□ -0.43
CACNA1E-208ENST00000533229 A0A1B0GX30 115 aa12.4□□□□□ -0.43
CACNA1E-208ENST00000533229 HIST1H1BP16401 226 aaKnown RBP12.4□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms