RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 SNAPC5O75971 98 aa8.8□□□□□ -1
TRAPPC4-213ENST00000533149 NXPH3O95157 252 aa8.8□□□□□ -1
TRAPPC4-213ENST00000533149 MOSP00540 346 aa8.8□□□□□ -1
TRAPPC4-213ENST00000533149 IGKV1D-33P01593 117 aa8.8□□□□□ -1
TRAPPC4-213ENST00000533149 IGKV1-33P01594 117 aa8.8□□□□□ -1
TRAPPC4-213ENST00000533149 RLN2P04090 185 aa8.8□□□□□ -1
TRAPPC4-213ENST00000533149 AMY1AP04745 511 aa8.8□□□□□ -1
TRAPPC4-213ENST00000533149 SNRNP70P08621 437 aaKnown RBP8.8□□□□□ -1
TRAPPC4-213ENST00000533149 SAA1P0DJI8 122 aaPredicted RBP8.8□□□□□ -1
TRAPPC4-213ENST00000533149 INSL3P51460 131 aa8.8□□□□□ -1
TRAPPC4-213ENST00000533149 NKX2-5P52952 324 aaPredicted RBP8.8□□□□□ -1
TRAPPC4-213ENST00000533149 S100A10P60903 97 aa8.8□□□□□ -1
TRAPPC4-213ENST00000533149 UBE2KP61086 200 aa8.8□□□□□ -1
TRAPPC4-213ENST00000533149 SLC35B1P78383 322 aa8.8□□□□□ -1
TRAPPC4-213ENST00000533149 EBI3Q14213 229 aa8.8□□□□□ -1
TRAPPC4-213ENST00000533149 PSG5Q15238 335 aa8.8□□□□□ -1
TRAPPC4-213ENST00000533149 VMA21Q3ZAQ7 101 aa8.8□□□□□ -1
TRAPPC4-213ENST00000533149 THNSL2Q86YJ6 484 aa8.8□□□□□ -1
TRAPPC4-213ENST00000533149 FAM71E2Q8N5Q1 922 aa8.8□□□□□ -1
TRAPPC4-213ENST00000533149 OR2T10Q8NGZ9 312 aa8.8□□□□□ -1
TRAPPC4-213ENST00000533149 THAP6Q8TBB0 222 aa8.8□□□□□ -1
TRAPPC4-213ENST00000533149 EAF1Q96JC9 268 aaPredicted RBP8.8□□□□□ -1
TRAPPC4-213ENST00000533149 HYLS1Q96M11 299 aa8.8□□□□□ -1
TRAPPC4-213ENST00000533149 TSNAXQ99598 290 aaKnown RBP8.8□□□□□ -1
TRAPPC4-213ENST00000533149 TM2D3Q9BRN9 247 aa8.8□□□□□ -1
TRAPPC4-213ENST00000533149 QTRT1Q9BXR0 403 aaKnown RBP8.8□□□□□ -1
TRAPPC4-213ENST00000533149 MAGT1Q9H0U3 335 aa8.8□□□□□ -1
TRAPPC4-213ENST00000533149 COA4Q9NYJ1 87 aa8.8□□□□□ -1
TRAPPC4-213ENST00000533149 HUWE1Q7Z6Z7 4374 aaKnown RBP8.79□□□□□ -1
TRAPPC4-213ENST00000533149 FXYD6-FXYD2A0A087WZ82 144 aa8.79□□□□□ -1
TRAPPC4-213ENST00000533149 SH2D7A6NKC9 451 aaPredicted RBP8.79□□□□□ -1
TRAPPC4-213ENST00000533149 SLC25A17O43808 307 aa8.79□□□□□ -1
TRAPPC4-213ENST00000533149 RBMXL2O75526 392 aaKnown RBP8.79□□□□□ -1
TRAPPC4-213ENST00000533149 KBTBD11O94819 623 aa8.79□□□□□ -1
TRAPPC4-213ENST00000533149 CRYGBP07316 175 aa8.79□□□□□ -1
TRAPPC4-213ENST00000533149 FAM106CPP0CH98 169 aa8.79□□□□□ -1
TRAPPC4-213ENST00000533149 CNTFRP26992 372 aa8.79□□□□□ -1
TRAPPC4-213ENST00000533149 F2RL1P55085 397 aa8.79□□□□□ -1
TRAPPC4-213ENST00000533149 POLR2GP62487 172 aaKnown RBP eCLIP8.79□□□□□ -1
TRAPPC4-213ENST00000533149 HES1Q14469 280 aa8.79□□□□□ -1
TRAPPC4-213ENST00000533149 PRSS54Q6PEW0 395 aa8.79□□□□□ -1
TRAPPC4-213ENST00000533149 ZNF546Q86UE3 836 aa8.79□□□□□ -1
TRAPPC4-213ENST00000533149 TEX45Q8NA69 505 aa8.79□□□□□ -1
TRAPPC4-213ENST00000533149 OR4A5Q8NH83 315 aa8.79□□□□□ -1
TRAPPC4-213ENST00000533149 GRPEL2Q8TAA5 225 aa8.79□□□□□ -1
TRAPPC4-213ENST00000533149 IL17DQ8TAD2 202 aa8.79□□□□□ -1
TRAPPC4-213ENST00000533149 TMEM167AQ8TBQ9 72 aa8.79□□□□□ -1
TRAPPC4-213ENST00000533149 BET1LQ9NYM9 111 aa8.79□□□□□ -1
TRAPPC4-213ENST00000533149 OR5AC2Q9NZP5 309 aa8.79□□□□□ -1
TRAPPC4-213ENST00000533149 MBD2Q9UBB5 411 aa8.79□□□□□ -1
TRAPPC4-213ENST00000533149 RCL1Q9Y2P8 373 aaKnown RBP8.79□□□□□ -1
TRAPPC4-213ENST00000533149 FAM90A26D6RGX4 464 aa8.78□□□□□ -1
TRAPPC4-213ENST00000533149 WRBO00258 174 aa8.78□□□□□ -1
TRAPPC4-213ENST00000533149 DEDDO75618 318 aa8.78□□□□□ -1
TRAPPC4-213ENST00000533149 OR2B8PP59922 312 aa8.78□□□□□ -1
TRAPPC4-213ENST00000533149 TMEM65Q6PI78 240 aa8.78□□□□□ -1
TRAPPC4-213ENST00000533149 VSTM2AQ8TAG5 236 aa8.78□□□□□ -1
TRAPPC4-213ENST00000533149 RBKSQ9H477 322 aa8.78□□□□□ -1
TRAPPC4-213ENST00000533149 PRNDQ9UKY0 176 aa8.78□□□□□ -1
TRAPPC4-213ENST00000533149 PCLOQ9Y6V0 5065 aa8.77□□□□□ -1.01
TRAPPC4-213ENST00000533149 HMSDA8MTL9 139 aa8.77□□□□□ -1.01
TRAPPC4-213ENST00000533149 SYNGR2O43760 224 aa8.77□□□□□ -1.01
TRAPPC4-213ENST00000533149 SSSCA1O60232 199 aa8.77□□□□□ -1.01
TRAPPC4-213ENST00000533149 IFNA17P01571 189 aa8.77□□□□□ -1.01
TRAPPC4-213ENST00000533149 PET100P0DJ07 73 aa8.77□□□□□ -1.01
TRAPPC4-213ENST00000533149 MYOD1P15172 320 aa8.77□□□□□ -1.01
TRAPPC4-213ENST00000533149 TMEM11P17152 192 aa8.77□□□□□ -1.01
TRAPPC4-213ENST00000533149 SPCS3P61009 180 aa8.77□□□□□ -1.01
TRAPPC4-213ENST00000533149 HSPE1P61604 102 aaKnown RBP8.77□□□□□ -1.01
TRAPPC4-213ENST00000533149 TNFRSF9Q07011 255 aa8.77□□□□□ -1.01
TRAPPC4-213ENST00000533149 MRGPRG-AS1Q2M3A8 158 aa8.77□□□□□ -1.01
TRAPPC4-213ENST00000533149 AARDQ4LEZ3 155 aa8.77□□□□□ -1.01
TRAPPC4-213ENST00000533149 Q8N6K4 173 aa8.77□□□□□ -1.01
TRAPPC4-213ENST00000533149 NPBQ8NG41 125 aa8.77□□□□□ -1.01
TRAPPC4-213ENST00000533149 OR52E5Q8NH55 327 aa8.77□□□□□ -1.01
TRAPPC4-213ENST00000533149 DCUN1D4Q92564 292 aa8.77□□□□□ -1.01
TRAPPC4-213ENST00000533149 CLCC1Q96S66 551 aa8.77□□□□□ -1.01
TRAPPC4-213ENST00000533149 FBXL15Q9H469 300 aa8.77□□□□□ -1.01
TRAPPC4-213ENST00000533149 C11orf1Q9H5F2 150 aa8.77□□□□□ -1.01
TRAPPC4-213ENST00000533149 PLSCR3Q9NRY6 295 aa8.77□□□□□ -1.01
TRAPPC4-213ENST00000533149 TMEM14BQ9NUH8 114 aa8.77□□□□□ -1.01
TRAPPC4-213ENST00000533149 FKBP11Q9NYL4 201 aa8.77□□□□□ -1.01
TRAPPC4-213ENST00000533149 METTL1Q9UBP6 276 aaKnown RBP8.77□□□□□ -1.01
TRAPPC4-213ENST00000533149 HSPB7Q9UBY9 170 aa8.77□□□□□ -1.01
TRAPPC4-213ENST00000533149 CACFD1Q9UGQ2 172 aa8.77□□□□□ -1.01
TRAPPC4-213ENST00000533149 FOXA2Q9Y261 457 aaPredicted RBP8.77□□□□□ -1.01
TRAPPC4-213ENST00000533149 OR51B2Q9Y5P1 312 aa8.77□□□□□ -1.01
TRAPPC4-213ENST00000533149 CSMD3Q7Z407 3707 aa8.76□□□□□ -1.01
TRAPPC4-213ENST00000533149 TEX50A0A1B0GTY4 177 aa8.76□□□□□ -1.01
TRAPPC4-213ENST00000533149 C15orf61A6NNL5 157 aa8.76□□□□□ -1.01
TRAPPC4-213ENST00000533149 NCBP2LA6PVI3 153 aaKnown RBP8.76□□□□□ -1.01
TRAPPC4-213ENST00000533149 CEBPZOSA8MTT3 80 aa8.76□□□□□ -1.01
TRAPPC4-213ENST00000533149 E5RGE8 158 aa8.76□□□□□ -1.01
TRAPPC4-213ENST00000533149 L7N2F9 121 aa8.76□□□□□ -1.01
TRAPPC4-213ENST00000533149 FCN1O00602 326 aa8.76□□□□□ -1.01
TRAPPC4-213ENST00000533149 RRHO14718 337 aa8.76□□□□□ -1.01
TRAPPC4-213ENST00000533149 NBR2O15453 112 aa8.76□□□□□ -1.01
TRAPPC4-213ENST00000533149 ARPC5O15511 151 aa8.76□□□□□ -1.01
TRAPPC4-213ENST00000533149 MED6O75586 246 aa8.76□□□□□ -1.01
TRAPPC4-213ENST00000533149 SPDEFO95238 335 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms