RNA–Protein interactions for RNA: ENST00000532881.5

SSH3-210, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 1 (best)

Gene SSH3, Length 2,587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-210ENST00000532881 MRPL20Q9BYC9 149 aaKnown RBP12.14□□□□□ -0.47
SSH3-210ENST00000532881 TP53TG5Q9Y2B4 290 aa12.14□□□□□ -0.47
SSH3-210ENST00000532881 OR10J1P30954 320 aa12.14□□□□□ -0.47
SSH3-210ENST00000532881 RAB7AP51149 207 aa12.14□□□□□ -0.47
SSH3-210ENST00000532881 LYPD2Q6UXB3 125 aa12.14□□□□□ -0.47
SSH3-210ENST00000532881 ZNF788Q6ZQV5 615 aa12.14□□□□□ -0.47
SSH3-210ENST00000532881 FAM222BQ8WU58 562 aa12.14□□□□□ -0.47
SSH3-210ENST00000532881 NABP2Q9BQ15 211 aa12.14□□□□□ -0.47
SSH3-210ENST00000532881 RNASE7Q9H1E1 156 aaKnown RBP12.14□□□□□ -0.47
SSH3-210ENST00000532881 PLEKHA3Q9HB20 300 aa12.14□□□□□ -0.47
SSH3-210ENST00000532881 ZNF318Q5VUA4 2279 aa12.14□□□□□ -0.47
SSH3-210ENST00000532881 TRGV8A0A0C4DH27 118 aa12.13□□□□□ -0.47
SSH3-210ENST00000532881 FAM90A9PA6NNJ1 464 aa12.13□□□□□ -0.47
SSH3-210ENST00000532881 A8MXE2 369 aa12.13□□□□□ -0.47
SSH3-210ENST00000532881 RNF224P0DH78 156 aa12.13□□□□□ -0.47
SSH3-210ENST00000532881 SSX2Q16385 188 aa12.13□□□□□ -0.47
SSH3-210ENST00000532881 C19orf35Q6ZS72 473 aa12.13□□□□□ -0.47
SSH3-210ENST00000532881 OR10G8Q8NGN5 311 aa12.13□□□□□ -0.47
SSH3-210ENST00000532881 CCL17Q92583 94 aa12.13□□□□□ -0.47
SSH3-210ENST00000532881 LINC00479Q96M42 142 aa12.13□□□□□ -0.47
SSH3-210ENST00000532881 IL19Q9UHD0 177 aa12.13□□□□□ -0.47
SSH3-210ENST00000532881 OR7C2O60412 319 aa12.13□□□□□ -0.47
SSH3-210ENST00000532881 PKIAP61925 76 aa12.13□□□□□ -0.47
SSH3-210ENST00000532881 RHOBP62745 196 aa12.13□□□□□ -0.47
SSH3-210ENST00000532881 PRR20EP86478 221 aa12.13□□□□□ -0.47
SSH3-210ENST00000532881 PRR20CP86479 221 aa12.13□□□□□ -0.47
SSH3-210ENST00000532881 PRR20DP86480 221 aa12.13□□□□□ -0.47
SSH3-210ENST00000532881 PRR20BP86481 221 aa12.13□□□□□ -0.47
SSH3-210ENST00000532881 PRR20AP86496 221 aa12.13□□□□□ -0.47
SSH3-210ENST00000532881 RUSC1-AS1Q66K80 236 aa12.13□□□□□ -0.47
SSH3-210ENST00000532881 H1FXQ92522 213 aaKnown RBP12.13□□□□□ -0.47
SSH3-210ENST00000532881 ACY3Q96HD9 319 aa12.13□□□□□ -0.47
SSH3-210ENST00000532881 RITA1Q96K30 269 aa12.13□□□□□ -0.47
SSH3-210ENST00000532881 TYMSP04818 313 aa12.12□□□□□ -0.47
SSH3-210ENST00000532881 REG1AP05451 166 aa12.12□□□□□ -0.47
SSH3-210ENST00000532881 TCL1AP56279 114 aa12.12□□□□□ -0.47
SSH3-210ENST00000532881 ZNF90Q03938 601 aa12.12□□□□□ -0.47
SSH3-210ENST00000532881 KRTCAP3Q53RY4 240 aa12.12□□□□□ -0.47
SSH3-210ENST00000532881 Q6ZS92 163 aa12.12□□□□□ -0.47
SSH3-210ENST00000532881 NEUROG1Q92886 237 aa12.12□□□□□ -0.47
SSH3-210ENST00000532881 IGHV3-72A0A0B4J1Y9 119 aa12.12□□□□□ -0.47
SSH3-210ENST00000532881 UPK2O00526 184 aa12.12□□□□□ -0.47
SSH3-210ENST00000532881 PRB4P10163 310 aaPredicted RBP12.12□□□□□ -0.47
SSH3-210ENST00000532881 PQLC2Q6ZP29 291 aa12.12□□□□□ -0.47
SSH3-210ENST00000532881 FAM169BQ8N8A8 192 aa12.12□□□□□ -0.47
SSH3-210ENST00000532881 UHRF2Q96PU4 802 aa12.12□□□□□ -0.47
SSH3-210ENST00000532881 RPUSD1Q9UJJ7 312 aaKnown RBP12.12□□□□□ -0.47
SSH3-210ENST00000532881 TP53TG3Q9ULZ0 132 aa12.12□□□□□ -0.47
SSH3-210ENST00000532881 CUL9Q8IWT3 2517 aa12.12□□□□□ -0.47
SSH3-210ENST00000532881 A0A0G2JNJ9 132 aa12.11□□□□□ -0.47
SSH3-210ENST00000532881 DPRXA6NFQ7 191 aa12.11□□□□□ -0.47
SSH3-210ENST00000532881 TSTD3H0UI37 97 aa12.11□□□□□ -0.47
SSH3-210ENST00000532881 CA1P00915 261 aaPredicted RBP12.11□□□□□ -0.47
SSH3-210ENST00000532881 PDLIM4P50479 330 aa12.11□□□□□ -0.47
SSH3-210ENST00000532881 COA6Q5JTJ3 125 aaKnown RBP12.11□□□□□ -0.47
SSH3-210ENST00000532881 SLC25A48Q6ZT89 311 aaKnown RBP12.11□□□□□ -0.47
SSH3-210ENST00000532881 LURAP1LQ8IV03 231 aa12.11□□□□□ -0.47
SSH3-210ENST00000532881 Q9UFV3 132 aa12.11□□□□□ -0.47
SSH3-210ENST00000532881 NBASA2RRP1 2371 aa12.11□□□□□ -0.47
SSH3-210ENST00000532881 PLAUP00749 431 aa12.11□□□□□ -0.47
SSH3-210ENST00000532881 KIR2DS2P43631 304 aa12.11□□□□□ -0.47
SSH3-210ENST00000532881 GATA4P43694 442 aa12.11□□□□□ -0.47
SSH3-210ENST00000532881 RPL29P47914 159 aaKnown RBP12.11□□□□□ -0.47
SSH3-210ENST00000532881 SELENOVP59797 346 aa12.11□□□□□ -0.47
SSH3-210ENST00000532881 ERVFC1-1P60608 527 aa12.11□□□□□ -0.47
SSH3-210ENST00000532881 SUMO1P63165 101 aaKnown RBP12.11□□□□□ -0.47
SSH3-210ENST00000532881 KIAA1644Q3SXP7 199 aa12.11□□□□□ -0.47
SSH3-210ENST00000532881 GBGT1Q8N5D6 347 aa12.11□□□□□ -0.47
SSH3-210ENST00000532881 HARBI1Q96MB7 349 aa12.11□□□□□ -0.47
SSH3-210ENST00000532881 TPSG1Q9NRR2 321 aa12.11□□□□□ -0.47
SSH3-210ENST00000532881 SLC25A10Q9UBX3 287 aaPredicted RBP12.11□□□□□ -0.47
SSH3-210ENST00000532881 SLC45A2Q9UMX9 530 aa12.11□□□□□ -0.47
SSH3-210ENST00000532881 SCGB1D1O95968 90 aa12.1□□□□□ -0.47
SSH3-210ENST00000532881 IER3P46695 156 aa12.1□□□□□ -0.47
SSH3-210ENST00000532881 BSPH1Q075Z2 132 aa12.1□□□□□ -0.47
SSH3-210ENST00000532881 DMRTC2Q8IXT2 367 aaPredicted RBP12.1□□□□□ -0.47
SSH3-210ENST00000532881 OR8I2Q8N0Y5 310 aa12.1□□□□□ -0.47
SSH3-210ENST00000532881 EAF1Q96JC9 268 aaPredicted RBP12.1□□□□□ -0.47
SSH3-210ENST00000532881 IGHV3-21A0A0B4J1V1 117 aa12.1□□□□□ -0.47
SSH3-210ENST00000532881 GGTLC3B5MD39 225 aa12.1□□□□□ -0.47
SSH3-210ENST00000532881 IRF2P14316 349 aa12.1□□□□□ -0.47
SSH3-210ENST00000532881 PRCDQ00LT1 54 aa12.1□□□□□ -0.47
SSH3-210ENST00000532881 FOXL1Q12952 345 aa12.1□□□□□ -0.47
SSH3-210ENST00000532881 ADIPOQQ15848 244 aa12.1□□□□□ -0.47
SSH3-210ENST00000532881 TDRG1Q3Y452 100 aa12.1□□□□□ -0.47
SSH3-210ENST00000532881 CENPWQ5EE01 88 aa12.1□□□□□ -0.47
SSH3-210ENST00000532881 TMEM200BQ69YZ2 307 aa12.1□□□□□ -0.47
SSH3-210ENST00000532881 RNASEH2CQ8TDP1 164 aaKnown RBP12.1□□□□□ -0.47
SSH3-210ENST00000532881 MISP3Q96FF7 219 aa12.1□□□□□ -0.47
SSH3-210ENST00000532881 SGK494Q96LW2 274 aa12.1□□□□□ -0.47
SSH3-210ENST00000532881 MRPL36Q9P0J6 103 aaKnown RBP12.1□□□□□ -0.47
SSH3-210ENST00000532881 GATCO43716 136 aaKnown RBP12.09□□□□□ -0.47
SSH3-210ENST00000532881 RNASE2P10153 161 aaKnown RBP12.09□□□□□ -0.47
SSH3-210ENST00000532881 LINC00310P59036 64 aa12.09□□□□□ -0.47
SSH3-210ENST00000532881 LCN2P80188 198 aa12.09□□□□□ -0.47
SSH3-210ENST00000532881 OR5R1Q8NH85 324 aa12.09□□□□□ -0.47
SSH3-210ENST00000532881 PYYP10082 97 aa12.09□□□□□ -0.47
SSH3-210ENST00000532881 RAB31Q13636 194 aa12.09□□□□□ -0.47
SSH3-210ENST00000532881 TMEM249Q2WGJ8 235 aa12.09□□□□□ -0.47
SSH3-210ENST00000532881 PRR30Q53SZ7 412 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms