RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 IGHV3-35A0A0C4DH35 117 aa13.42□□□□□ -0.26
SMG1-203ENST00000532700 H0Y980 276 aa13.42□□□□□ -0.26
SMG1-203ENST00000532700 GGCTO75223 188 aaKnown RBP13.42□□□□□ -0.26
SMG1-203ENST00000532700 B3GALNT1O75752 331 aa13.42□□□□□ -0.26
SMG1-203ENST00000532700 KRASP01116 189 aa13.42□□□□□ -0.26
SMG1-203ENST00000532700 SERPINE2P07093 398 aa13.42□□□□□ -0.26
SMG1-203ENST00000532700 FOLR2P14207 255 aa13.42□□□□□ -0.26
SMG1-203ENST00000532700 CNPY1Q3B7I2 92 aa13.42□□□□□ -0.26
SMG1-203ENST00000532700 TRIQKQ629K1 86 aa13.42□□□□□ -0.26
SMG1-203ENST00000532700 LCN12Q6JVE5 192 aa13.42□□□□□ -0.26
SMG1-203ENST00000532700 LINC00299Q6ZSB3 139 aa13.42□□□□□ -0.26
SMG1-203ENST00000532700 CADM3Q8N126 398 aa13.42□□□□□ -0.26
SMG1-203ENST00000532700 ZNF502Q8TBZ5 544 aa13.42□□□□□ -0.26
SMG1-203ENST00000532700 WDR89Q96FK6 387 aaPredicted RBP13.42□□□□□ -0.26
SMG1-203ENST00000532700 GAR1Q9NY12 217 aaKnown RBP13.42□□□□□ -0.26
SMG1-203ENST00000532700 PEMTQ9UBM1 199 aa13.42□□□□□ -0.26
SMG1-203ENST00000532700 IGHV3-21A0A0B4J1V1 117 aa13.41□□□□□ -0.26
SMG1-203ENST00000532700 FGF2P09038 288 aa13.41□□□□□ -0.26
SMG1-203ENST00000532700 HAGHQ16775 308 aa13.41□□□□□ -0.26
SMG1-203ENST00000532700 TATDN3Q17R31 274 aa13.41□□□□□ -0.26
SMG1-203ENST00000532700 ZNF57Q68EA5 555 aaPredicted RBP13.41□□□□□ -0.26
SMG1-203ENST00000532700 SGPP2Q8IWX5 399 aa13.41□□□□□ -0.26
SMG1-203ENST00000532700 MRGPRFQ96AM1 343 aa13.41□□□□□ -0.26
SMG1-203ENST00000532700 QTRT1Q9BXR0 403 aaKnown RBP13.41□□□□□ -0.26
SMG1-203ENST00000532700 COMMD5Q9GZQ3 224 aa13.41□□□□□ -0.26
SMG1-203ENST00000532700 MLXQ9UH92 298 aa13.41□□□□□ -0.26
SMG1-203ENST00000532700 GPR132Q9UNW8 380 aa13.41□□□□□ -0.26
SMG1-203ENST00000532700 CSMD3Q7Z407 3707 aa13.4□□□□□ -0.26
SMG1-203ENST00000532700 C3orf85A0A1B0GTC6 90 aa13.4□□□□□ -0.26
SMG1-203ENST00000532700 LGALS9O00182 355 aa13.4□□□□□ -0.26
SMG1-203ENST00000532700 ATG12O94817 140 aa13.4□□□□□ -0.26
SMG1-203ENST00000532700 DEFA4P12838 97 aa13.4□□□□□ -0.26
SMG1-203ENST00000532700 GPR183P32249 361 aa13.4□□□□□ -0.26
SMG1-203ENST00000532700 TM4SF20Q53R12 229 aa13.4□□□□□ -0.26
SMG1-203ENST00000532700 GPHB5Q86YW7 130 aa13.4□□□□□ -0.26
SMG1-203ENST00000532700 EEF1AKMT3Q96AZ1 226 aa13.4□□□□□ -0.26
SMG1-203ENST00000532700 RTBDNQ9BSG5 229 aaPredicted RBP13.4□□□□□ -0.26
SMG1-203ENST00000532700 NDUFA4L2Q9NRX3 87 aa13.4□□□□□ -0.26
SMG1-203ENST00000532700 TEX13DA0A0J9YY54 714 aaPredicted RBP13.39□□□□□ -0.27
SMG1-203ENST00000532700 F8W735 103 aaPredicted RBP13.39□□□□□ -0.27
SMG1-203ENST00000532700 SNAPC5O75971 98 aa13.39□□□□□ -0.27
SMG1-203ENST00000532700 CLEC3BP05452 202 aa13.39□□□□□ -0.27
SMG1-203ENST00000532700 OR13C7P0DN81 318 aa13.39□□□□□ -0.27
SMG1-203ENST00000532700 CBLN1P23435 193 aa13.39□□□□□ -0.27
SMG1-203ENST00000532700 CD81P60033 236 aa13.39□□□□□ -0.27
SMG1-203ENST00000532700 IZUMO4Q1ZYL8 232 aa13.39□□□□□ -0.27
SMG1-203ENST00000532700 LINC00322Q6ZN03 302 aaPredicted RBP13.39□□□□□ -0.27
SMG1-203ENST00000532700 TMEM61Q8N0U2 210 aa13.39□□□□□ -0.27
SMG1-203ENST00000532700 DEFB125Q8N687 156 aa13.39□□□□□ -0.27
SMG1-203ENST00000532700 MUC7Q8TAX7 377 aa13.39□□□□□ -0.27
SMG1-203ENST00000532700 TSC22D3Q99576 134 aa13.39□□□□□ -0.27
SMG1-203ENST00000532700 C5orf66Q9H5L9 145 aa13.39□□□□□ -0.27
SMG1-203ENST00000532700 STARD9Q9P2P6 4700 aa13.38□□□□□ -0.27
SMG1-203ENST00000532700 A8MWP6 167 aa13.38□□□□□ -0.27
SMG1-203ENST00000532700 TRAPPC2P0DI81 140 aa13.38□□□□□ -0.27
SMG1-203ENST00000532700 TRAPPC2BP0DI82 140 aa13.38□□□□□ -0.27
SMG1-203ENST00000532700 HIST1H1BP16401 226 aaKnown RBP13.38□□□□□ -0.27
SMG1-203ENST00000532700 BAK1Q16611 211 aa13.38□□□□□ -0.27
SMG1-203ENST00000532700 CASC10Q5T4H9 136 aa13.38□□□□□ -0.27
SMG1-203ENST00000532700 GTSCR1Q86UQ5 136 aa13.38□□□□□ -0.27
SMG1-203ENST00000532700 DYNLRB2Q8TF09 96 aa13.38□□□□□ -0.27
SMG1-203ENST00000532700 SEC22AQ96IW7 307 aa13.38□□□□□ -0.27
SMG1-203ENST00000532700 TP53RKQ96S44 253 aa13.38□□□□□ -0.27
SMG1-203ENST00000532700 NEURL2Q9BR09 285 aa13.38□□□□□ -0.27
SMG1-203ENST00000532700 HINT2Q9BX68 163 aa13.38□□□□□ -0.27
SMG1-203ENST00000532700 EDA2RQ9HAV5 297 aa13.38□□□□□ -0.27
SMG1-203ENST00000532700 OR51B2Q9Y5P1 312 aa13.38□□□□□ -0.27
SMG1-203ENST00000532700 ZNF320A2RRD8 509 aa13.37□□□□□ -0.27
SMG1-203ENST00000532700 RBMY1BA6NDE4 496 aaKnown RBP13.37□□□□□ -0.27
SMG1-203ENST00000532700 RBMY1EA6NEQ0 496 aaKnown RBP13.37□□□□□ -0.27
SMG1-203ENST00000532700 NAP1L6A6NFF2 107 aa13.37□□□□□ -0.27
SMG1-203ENST00000532700 CENPXA8MT69 81 aa13.37□□□□□ -0.27
SMG1-203ENST00000532700 RBMY1DP0C7P1 496 aaKnown RBP13.37□□□□□ -0.27
SMG1-203ENST00000532700 GUCA2BQ16661 112 aa13.37□□□□□ -0.27
SMG1-203ENST00000532700 TRIM16LQ309B1 348 aa13.37□□□□□ -0.27
SMG1-203ENST00000532700 FAM209BQ5JX69 171 aa13.37□□□□□ -0.27
SMG1-203ENST00000532700 H2BFWTQ7Z2G1 175 aa13.37□□□□□ -0.27
SMG1-203ENST00000532700 OR2K2Q8NGT1 345 aa13.37□□□□□ -0.27
SMG1-203ENST00000532700 S100ZQ8WXG8 99 aa13.37□□□□□ -0.27
SMG1-203ENST00000532700 FAM110AQ9BQ89 295 aa13.37□□□□□ -0.27
SMG1-203ENST00000532700 SLC25A21Q9BQT8 299 aaPredicted RBP13.37□□□□□ -0.27
SMG1-203ENST00000532700 CHRDL1Q9BU40 450 aa13.37□□□□□ -0.27
SMG1-203ENST00000532700 NAA60Q9H7X0 242 aa13.37□□□□□ -0.27
SMG1-203ENST00000532700 FKBP11Q9NYL4 201 aa13.37□□□□□ -0.27
SMG1-203ENST00000532700 PTTG2Q9NZH5 202 aa13.37□□□□□ -0.27
SMG1-203ENST00000532700 PRNDQ9UKY0 176 aa13.37□□□□□ -0.27
SMG1-203ENST00000532700 KCNIP3Q9Y2W7 256 aa13.37□□□□□ -0.27
SMG1-203ENST00000532700 DYNC2H1Q8NCM8 4307 aaKnown RBP13.37□□□□□ -0.27
SMG1-203ENST00000532700 IGHV3OR16-8A0A075B7F1 116 aa13.36□□□□□ -0.27
SMG1-203ENST00000532700 TRBV7-1A0A0A6YYK4 115 aa13.36□□□□□ -0.27
SMG1-203ENST00000532700 CRYM-AS1A6NIL9 109 aa13.36□□□□□ -0.27
SMG1-203ENST00000532700 K7EIM0 57 aa13.36□□□□□ -0.27
SMG1-203ENST00000532700 DHFRP00374 187 aa13.36□□□□□ -0.27
SMG1-203ENST00000532700 ADMP35318 185 aa13.36□□□□□ -0.27
SMG1-203ENST00000532700 DHODHQ02127 395 aa13.36□□□□□ -0.27
SMG1-203ENST00000532700 THOC7Q6I9Y2 204 aaKnown RBP13.36□□□□□ -0.27
SMG1-203ENST00000532700 BTNL8Q6UX41 500 aa13.36□□□□□ -0.27
SMG1-203ENST00000532700 UXS1Q8NBZ7 420 aa13.36□□□□□ -0.27
SMG1-203ENST00000532700 OR1L8Q8NGR8 309 aa13.36□□□□□ -0.27
SMG1-203ENST00000532700 CITED4Q96RK1 184 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms