RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 FUT9Q9Y231 359 aa14.01□□□□□ -0.17
BRCA2-204ENST00000530893 A0A087X0M5 115 aa14□□□□□ -0.17
BRCA2-204ENST00000530893 A0A1B0GX30 115 aa14□□□□□ -0.17
BRCA2-204ENST00000530893 ZNF137PP52743 207 aa14□□□□□ -0.17
BRCA2-204ENST00000530893 RPL8P62917 257 aaKnown RBP14□□□□□ -0.17
BRCA2-204ENST00000530893 ERHP84090 104 aaKnown RBP14□□□□□ -0.17
BRCA2-204ENST00000530893 TMEM183AQ8IXX5 376 aa14□□□□□ -0.17
BRCA2-204ENST00000530893 OR10X1Q8NGY0 326 aa14□□□□□ -0.17
BRCA2-204ENST00000530893 WFIKKN1Q96NZ8 548 aa14□□□□□ -0.17
BRCA2-204ENST00000530893 ZNRD1Q9P1U0 126 aa14□□□□□ -0.17
BRCA2-204ENST00000530893 LY96Q9Y6Y9 160 aa14□□□□□ -0.17
BRCA2-204ENST00000530893 ZFHX2Q9C0A1 2572 aaPredicted RBP14□□□□□ -0.17
BRCA2-204ENST00000530893 A0A1W2PN81 502 aa14□□□□□ -0.17
BRCA2-204ENST00000530893 FCN3O75636 299 aa14□□□□□ -0.17
BRCA2-204ENST00000530893 CHRNA7P36544 502 aa14□□□□□ -0.17
BRCA2-204ENST00000530893 GPX4P36969 197 aaPredicted RBP14□□□□□ -0.17
BRCA2-204ENST00000530893 FAM78BQ5VT40 261 aa14□□□□□ -0.17
BRCA2-204ENST00000530893 GFI1BQ5VTD9 330 aa14□□□□□ -0.17
BRCA2-204ENST00000530893 OR10D4PQ8NGN7 298 aa14□□□□□ -0.17
BRCA2-204ENST00000530893 TMEM167AQ8TBQ9 72 aa14□□□□□ -0.17
BRCA2-204ENST00000530893 H1FXQ92522 213 aaKnown RBP14□□□□□ -0.17
BRCA2-204ENST00000530893 SFRP2Q96HF1 295 aa14□□□□□ -0.17
BRCA2-204ENST00000530893 NABP2Q9BQ15 211 aa14□□□□□ -0.17
BRCA2-204ENST00000530893 DYNLRB1Q9NP97 96 aa14□□□□□ -0.17
BRCA2-204ENST00000530893 YTHDF2Q9Y5A9 579 aaKnown RBP14□□□□□ -0.17
BRCA2-204ENST00000530893 MDFIC2A0A1B0GVS7 189 aa13.99□□□□□ -0.17
BRCA2-204ENST00000530893 SHISA9B4DS77 424 aa13.99□□□□□ -0.17
BRCA2-204ENST00000530893 C9JCJ5 164 aa13.99□□□□□ -0.17
BRCA2-204ENST00000530893 K7ENP7 123 aa13.99□□□□□ -0.17
BRCA2-204ENST00000530893 CD69Q07108 199 aa13.99□□□□□ -0.17
BRCA2-204ENST00000530893 GAMTQ14353 236 aa13.99□□□□□ -0.17
BRCA2-204ENST00000530893 ACTL10Q5JWF8 245 aa13.99□□□□□ -0.17
BRCA2-204ENST00000530893 OR4P4Q8NGL7 312 aa13.99□□□□□ -0.17
BRCA2-204ENST00000530893 DMRT1Q9Y5R6 373 aa13.99□□□□□ -0.17
BRCA2-204ENST00000530893 BSNQ9UPA5 3926 aa13.99□□□□□ -0.17
BRCA2-204ENST00000530893 ANKRD11Q6UB99 2663 aaPredicted RBP13.98□□□□□ -0.17
BRCA2-204ENST00000530893 TRBV20OR9-2A0A075B6H5 130 aa13.98□□□□□ -0.17
BRCA2-204ENST00000530893 SCO2A0A1W2PP80 73 aa13.98□□□□□ -0.17
BRCA2-204ENST00000530893 IGHV2-70P01814 119 aa13.98□□□□□ -0.17
BRCA2-204ENST00000530893 SPATA31B1PQ5VZV4 182 aa13.98□□□□□ -0.17
BRCA2-204ENST00000530893 PQLC2Q6ZP29 291 aa13.98□□□□□ -0.17
BRCA2-204ENST00000530893 ST6GALNAC6Q969X2 333 aa13.98□□□□□ -0.17
BRCA2-204ENST00000530893 VKORC1Q9BQB6 163 aa13.98□□□□□ -0.17
BRCA2-204ENST00000530893 TECRQ9NZ01 308 aaKnown RBP13.98□□□□□ -0.17
BRCA2-204ENST00000530893 DVL1O14640 695 aa13.98□□□□□ -0.17
BRCA2-204ENST00000530893 MC5RP33032 325 aa13.98□□□□□ -0.17
BRCA2-204ENST00000530893 TAS2R45P59539 299 aa13.98□□□□□ -0.17
BRCA2-204ENST00000530893 SSX2Q16385 188 aa13.98□□□□□ -0.17
BRCA2-204ENST00000530893 HLA-DRB5Q30154 266 aa13.98□□□□□ -0.17
BRCA2-204ENST00000530893 OR5T1Q8NG75 326 aa13.98□□□□□ -0.17
BRCA2-204ENST00000530893 OR9G1Q8NH87 305 aa13.98□□□□□ -0.17
BRCA2-204ENST00000530893 WASHC3Q9Y3C0 194 aa13.98□□□□□ -0.17
BRCA2-204ENST00000530893 CEP250Q9BV73 2442 aa13.98□□□□□ -0.17
BRCA2-204ENST00000530893 GVINP1Q7Z2Y8 2422 aa13.97□□□□□ -0.17
BRCA2-204ENST00000530893 IGKV1OR2-108A0A075B7D4 117 aa13.97□□□□□ -0.17
BRCA2-204ENST00000530893 E7EQL1 145 aa13.97□□□□□ -0.17
BRCA2-204ENST00000530893 LOXP28300 417 aaPredicted RBP13.97□□□□□ -0.17
BRCA2-204ENST00000530893 APOBEC3AP31941 199 aaPredicted RBP13.97□□□□□ -0.17
BRCA2-204ENST00000530893 PDLIM4P50479 330 aa13.97□□□□□ -0.17
BRCA2-204ENST00000530893 DLX6P56179 175 aa13.97□□□□□ -0.17
BRCA2-204ENST00000530893 TMEM155Q4W5P6 130 aa13.97□□□□□ -0.17
BRCA2-204ENST00000530893 LYPD2Q6UXB3 125 aa13.97□□□□□ -0.17
BRCA2-204ENST00000530893 CTSZQ9UBR2 303 aa13.97□□□□□ -0.17
BRCA2-204ENST00000530893 ACACAQ13085 2346 aa13.97□□□□□ -0.17
BRCA2-204ENST00000530893 B9A039 149 aa13.97□□□□□ -0.17
BRCA2-204ENST00000530893 OR5G3P0C626 314 aa13.97□□□□□ -0.17
BRCA2-204ENST00000530893 C1QTNF9P0C862 333 aa13.97□□□□□ -0.17
BRCA2-204ENST00000530893 FABP4P15090 132 aa13.97□□□□□ -0.17
BRCA2-204ENST00000530893 CHRNB4P30926 498 aa13.97□□□□□ -0.17
BRCA2-204ENST00000530893 MIR17HGQ75NE6 70 aa13.97□□□□□ -0.17
BRCA2-204ENST00000530893 DMRTC2Q8IXT2 367 aaPredicted RBP13.97□□□□□ -0.17
BRCA2-204ENST00000530893 ZNF114Q8NC26 417 aa13.97□□□□□ -0.17
BRCA2-204ENST00000530893 OR1P1Q8NH06 330 aa13.97□□□□□ -0.17
BRCA2-204ENST00000530893 RNASEH2CQ8TDP1 164 aaKnown RBP13.97□□□□□ -0.17
BRCA2-204ENST00000530893 RNF2Q99496 336 aa13.97□□□□□ -0.17
BRCA2-204ENST00000530893 HIST1H2BLQ99880 126 aa13.97□□□□□ -0.17
BRCA2-204ENST00000530893 TNCP24821 2201 aa13.96□□□□□ -0.17
BRCA2-204ENST00000530893 TRAV9-1A0A075B6T8 112 aa13.96□□□□□ -0.17
BRCA2-204ENST00000530893 TRBV23-1A0A0A0MS06 115 aa13.96□□□□□ -0.17
BRCA2-204ENST00000530893 LINC00587B1AMM8 73 aa13.96□□□□□ -0.17
BRCA2-204ENST00000530893 FOXH1O75593 365 aa13.96□□□□□ -0.17
BRCA2-204ENST00000530893 IL3RAP26951 378 aa13.96□□□□□ -0.17
BRCA2-204ENST00000530893 OR10J1P30954 320 aa13.96□□□□□ -0.17
BRCA2-204ENST00000530893 SUB1P53999 127 aaKnown RBP eCLIP13.96□□□□□ -0.17
BRCA2-204ENST00000530893 PDZD11Q5EBL8 140 aa13.96□□□□□ -0.17
BRCA2-204ENST00000530893 OR10W1Q8NGF6 305 aa13.96□□□□□ -0.17
BRCA2-204ENST00000530893 TNFRSF14Q92956 283 aa13.96□□□□□ -0.17
BRCA2-204ENST00000530893 PACRGQ96M98 296 aaPredicted RBP13.96□□□□□ -0.17
BRCA2-204ENST00000530893 MRPL32Q9BYC8 188 aaKnown RBP13.96□□□□□ -0.17
BRCA2-204ENST00000530893 FOXC1Q12948 553 aa13.95□□□□□ -0.18
BRCA2-204ENST00000530893 PSG5Q15238 335 aa13.95□□□□□ -0.18
BRCA2-204ENST00000530893 TEX38Q6PEX7 206 aa13.95□□□□□ -0.18
BRCA2-204ENST00000530893 TGIF2LXQ8IUE1 241 aa13.95□□□□□ -0.18
BRCA2-204ENST00000530893 OCC1Q8TAD7 63 aa13.95□□□□□ -0.18
BRCA2-204ENST00000530893 IGHV1-69-2A0A0G2JMI3 117 aa13.95□□□□□ -0.18
BRCA2-204ENST00000530893 XKRY2A2RUG3 117 aa13.95□□□□□ -0.18
BRCA2-204ENST00000530893 OR10G8Q8NGN5 311 aa13.95□□□□□ -0.18
BRCA2-204ENST00000530893 SGMS2Q8NHU3 365 aa13.95□□□□□ -0.18
BRCA2-204ENST00000530893 PFDN5Q99471 154 aa13.95□□□□□ -0.18
BRCA2-204ENST00000530893 PGPEP1LA6NFU8 196 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms