RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 C19orf24Q9BVV8 132 aa12.48□□□□□ -0.41
USH1C-207ENST00000527720 CTSZQ9UBR2 303 aa12.48□□□□□ -0.41
USH1C-207ENST00000527720 IGHV1-69-2A0A0G2JMI3 117 aa12.48□□□□□ -0.41
USH1C-207ENST00000527720 A0A1W2PN81 502 aa12.48□□□□□ -0.41
USH1C-207ENST00000527720 NDUFB4O95168 129 aa12.48□□□□□ -0.41
USH1C-207ENST00000527720 CHRNA7P36544 502 aa12.48□□□□□ -0.41
USH1C-207ENST00000527720 TMEM155Q4W5P6 130 aa12.48□□□□□ -0.41
USH1C-207ENST00000527720 CACNG8Q8WXS5 425 aa12.48□□□□□ -0.41
USH1C-207ENST00000527720 SEPSECSQ9HD40 501 aaKnown RBP12.48□□□□□ -0.41
USH1C-207ENST00000527720 POLEQ07864 2286 aa12.47□□□□□ -0.41
USH1C-207ENST00000527720 TRBV23-1A0A0A0MS06 115 aa12.47□□□□□ -0.41
USH1C-207ENST00000527720 GGCTO75223 188 aaKnown RBP12.47□□□□□ -0.41
USH1C-207ENST00000527720 ERHP84090 104 aaKnown RBP12.47□□□□□ -0.41
USH1C-207ENST00000527720 KCNIP4Q6PIL6 250 aa12.47□□□□□ -0.41
USH1C-207ENST00000527720 OR9G1Q8NH87 305 aa12.47□□□□□ -0.41
USH1C-207ENST00000527720 BTF3L4Q96K17 158 aa12.47□□□□□ -0.41
USH1C-207ENST00000527720 IMMP2LQ96T52 175 aa12.47□□□□□ -0.41
USH1C-207ENST00000527720 GAR1Q9NY12 217 aaKnown RBP12.47□□□□□ -0.41
USH1C-207ENST00000527720 PPP5D1E7EU14 171 aa12.46□□□□□ -0.41
USH1C-207ENST00000527720 GPX4P36969 197 aaPredicted RBP12.46□□□□□ -0.41
USH1C-207ENST00000527720 CASP6P55212 293 aa12.46□□□□□ -0.41
USH1C-207ENST00000527720 CD69Q07108 199 aa12.46□□□□□ -0.41
USH1C-207ENST00000527720 FBXL19-AS1Q494R0 122 aa12.46□□□□□ -0.41
USH1C-207ENST00000527720 FUT9Q9Y231 359 aa12.46□□□□□ -0.41
USH1C-207ENST00000527720 WASHC3Q9Y3C0 194 aa12.46□□□□□ -0.41
USH1C-207ENST00000527720 MSRB2Q9Y3D2 182 aa12.46□□□□□ -0.41
USH1C-207ENST00000527720 ROS1P08922 2347 aa12.46□□□□□ -0.41
USH1C-207ENST00000527720 DLL1O00548 723 aa12.46□□□□□ -0.42
USH1C-207ENST00000527720 FSTL3O95633 263 aa12.46□□□□□ -0.42
USH1C-207ENST00000527720 TYMSP04818 313 aa12.46□□□□□ -0.42
USH1C-207ENST00000527720 AREGP15514 252 aa12.46□□□□□ -0.42
USH1C-207ENST00000527720 S100A2P29034 98 aa12.46□□□□□ -0.42
USH1C-207ENST00000527720 MC5RP33032 325 aa12.46□□□□□ -0.42
USH1C-207ENST00000527720 FAM3BP58499 235 aaPredicted RBP12.46□□□□□ -0.42
USH1C-207ENST00000527720 GAMTQ14353 236 aa12.46□□□□□ -0.42
USH1C-207ENST00000527720 LINC00469Q8N7U9 141 aa12.46□□□□□ -0.42
USH1C-207ENST00000527720 PTPRZ1P23471 2315 aaPredicted RBP12.46□□□□□ -0.42
USH1C-207ENST00000527720 FAM87AP0C7U9 286 aa12.45□□□□□ -0.42
USH1C-207ENST00000527720 IL3RAP26951 378 aa12.45□□□□□ -0.42
USH1C-207ENST00000527720 CHRNB4P30926 498 aa12.45□□□□□ -0.42
USH1C-207ENST00000527720 LCN2P80188 198 aa12.45□□□□□ -0.42
USH1C-207ENST00000527720 NECAP1Q8NC96 275 aa12.45□□□□□ -0.42
USH1C-207ENST00000527720 OR2T10Q8NGZ9 312 aa12.45□□□□□ -0.42
USH1C-207ENST00000527720 TNFRSF14Q92956 283 aa12.45□□□□□ -0.42
USH1C-207ENST00000527720 C11orf52Q96A22 123 aa12.45□□□□□ -0.42
USH1C-207ENST00000527720 TMEM167BQ9NRX6 74 aa12.45□□□□□ -0.42
USH1C-207ENST00000527720 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.45□□□□□ -0.42
USH1C-207ENST00000527720 IFITM10A6NMD0 228 aa12.45□□□□□ -0.42
USH1C-207ENST00000527720 IGHV1-8P0DP01 117 aa12.45□□□□□ -0.42
USH1C-207ENST00000527720 UCNP55089 124 aa12.45□□□□□ -0.42
USH1C-207ENST00000527720 FAM78BQ5VT40 261 aa12.45□□□□□ -0.42
USH1C-207ENST00000527720 SPATA31B1PQ5VZV4 182 aa12.45□□□□□ -0.42
USH1C-207ENST00000527720 TGIF2LXQ8IUE1 241 aa12.45□□□□□ -0.42
USH1C-207ENST00000527720 OR4P4Q8NGL7 312 aa12.45□□□□□ -0.42
USH1C-207ENST00000527720 UHRF2Q96PU4 802 aa12.45□□□□□ -0.42
USH1C-207ENST00000527720 NIT2Q9NQR4 276 aa12.45□□□□□ -0.42
USH1C-207ENST00000527720 PITPNC1Q9UKF7 332 aa12.45□□□□□ -0.42
USH1C-207ENST00000527720 YTHDF2Q9Y5A9 579 aaKnown RBP12.45□□□□□ -0.42
USH1C-207ENST00000527720 IGKV1OR2-108A0A075B7D4 117 aa12.44□□□□□ -0.42
USH1C-207ENST00000527720 REG1BP48304 166 aa12.44□□□□□ -0.42
USH1C-207ENST00000527720 HLA-DRB5Q30154 266 aa12.44□□□□□ -0.42
USH1C-207ENST00000527720 HIST3H2BBQ8N257 126 aa12.44□□□□□ -0.42
USH1C-207ENST00000527720 OR4X1Q8NH49 305 aa12.44□□□□□ -0.42
USH1C-207ENST00000527720 DERL1Q9BUN8 251 aa12.44□□□□□ -0.42
USH1C-207ENST00000527720 PIEZO2Q9H5I5 2752 aa12.44□□□□□ -0.42
USH1C-207ENST00000527720 DMXL2Q8TDJ6 3036 aa12.44□□□□□ -0.42
USH1C-207ENST00000527720 PTPRQQ9UMZ3 2332 aa12.44□□□□□ -0.42
USH1C-207ENST00000527720 IGLV2-23P01705 113 aa12.44□□□□□ -0.42
USH1C-207ENST00000527720 VMA21Q3ZAQ7 101 aa12.44□□□□□ -0.42
USH1C-207ENST00000527720 PQLC2Q6ZP29 291 aa12.44□□□□□ -0.42
USH1C-207ENST00000527720 LURAP1LQ8IV03 231 aa12.44□□□□□ -0.42
USH1C-207ENST00000527720 OR10W1Q8NGF6 305 aa12.44□□□□□ -0.42
USH1C-207ENST00000527720 RNASEH2CQ8TDP1 164 aaKnown RBP12.44□□□□□ -0.42
USH1C-207ENST00000527720 ELOVL1Q9BW60 279 aa12.44□□□□□ -0.42
USH1C-207ENST00000527720 TECRQ9NZ01 308 aaKnown RBP12.44□□□□□ -0.42
USH1C-207ENST00000527720 LY96Q9Y6Y9 160 aa12.44□□□□□ -0.42
USH1C-207ENST00000527720 PKDREJQ9NTG1 2253 aa12.43□□□□□ -0.42
USH1C-207ENST00000527720 SCO2A0A1W2PP80 73 aa12.43□□□□□ -0.42
USH1C-207ENST00000527720 A0A1W2PPQ1 181 aa12.43□□□□□ -0.42
USH1C-207ENST00000527720 OR5G3P0C626 314 aa12.43□□□□□ -0.42
USH1C-207ENST00000527720 OR10J1P30954 320 aa12.43□□□□□ -0.42
USH1C-207ENST00000527720 CA7P43166 264 aa12.43□□□□□ -0.42
USH1C-207ENST00000527720 LGALS7P47929 136 aa12.43□□□□□ -0.42
USH1C-207ENST00000527720 SUB1P53999 127 aaKnown RBP eCLIP12.43□□□□□ -0.42
USH1C-207ENST00000527720 TAS2R45P59539 299 aa12.43□□□□□ -0.42
USH1C-207ENST00000527720 FOXL1Q12952 345 aa12.43□□□□□ -0.42
USH1C-207ENST00000527720 RNF2Q99496 336 aa12.43□□□□□ -0.42
USH1C-207ENST00000527720 TMEM133Q9H2Q1 129 aa12.43□□□□□ -0.42
USH1C-207ENST00000527720 OR51M1Q9H341 326 aa12.43□□□□□ -0.42
USH1C-207ENST00000527720 C9JCJ5 164 aa12.42□□□□□ -0.42
USH1C-207ENST00000527720 MIR17HGQ75NE6 70 aa12.42□□□□□ -0.42
USH1C-207ENST00000527720 C11orf42Q8N5U0 333 aa12.42□□□□□ -0.42
USH1C-207ENST00000527720 SFRP2Q96HF1 295 aa12.42□□□□□ -0.42
USH1C-207ENST00000527720 RALYQ9UKM9 306 aaKnown RBP12.42□□□□□ -0.42
USH1C-207ENST00000527720 TRBV20OR9-2A0A075B6H5 130 aa12.42□□□□□ -0.42
USH1C-207ENST00000527720 MDFIC2A0A1B0GVS7 189 aa12.42□□□□□ -0.42
USH1C-207ENST00000527720 FOXH1O75593 365 aa12.42□□□□□ -0.42
USH1C-207ENST00000527720 SOD3P08294 240 aa12.42□□□□□ -0.42
USH1C-207ENST00000527720 DIAPH2-AS1Q14236 149 aa12.42□□□□□ -0.42
USH1C-207ENST00000527720 C4orf17Q53FE4 359 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms