RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 K7EMT4 169 aa16.63■□□□□ 0.25
TRAPPC4-208ENST00000527680 UBE2CO00762 179 aa16.63■□□□□ 0.25
TRAPPC4-208ENST00000527680 RPL35AP18077 110 aaKnown RBP16.63■□□□□ 0.25
TRAPPC4-208ENST00000527680 NAT1P18440 290 aa16.63■□□□□ 0.25
TRAPPC4-208ENST00000527680 HRH1P35367 487 aa16.63■□□□□ 0.25
TRAPPC4-208ENST00000527680 LPCAT3Q6P1A2 487 aa16.63■□□□□ 0.25
TRAPPC4-208ENST00000527680 OR5B3Q8NH48 314 aa16.63■□□□□ 0.25
TRAPPC4-208ENST00000527680 ATP6V0BQ99437 205 aa16.63■□□□□ 0.25
TRAPPC4-208ENST00000527680 TSC22D3Q99576 134 aa16.63■□□□□ 0.25
TRAPPC4-208ENST00000527680 ANAPC10Q9UM13 185 aa16.63■□□□□ 0.25
TRAPPC4-208ENST00000527680 SMIM31A0A1B0GVY4 71 aa16.62■□□□□ 0.25
TRAPPC4-208ENST00000527680 NUPL2O15504 423 aaKnown RBP16.62■□□□□ 0.25
TRAPPC4-208ENST00000527680 YIF1AO95070 293 aa16.62■□□□□ 0.25
TRAPPC4-208ENST00000527680 LY6G6CO95867 125 aa16.62■□□□□ 0.25
TRAPPC4-208ENST00000527680 LYG2Q86SG7 212 aa16.62■□□□□ 0.25
TRAPPC4-208ENST00000527680 LYSMD2Q8IV50 215 aa16.62■□□□□ 0.25
TRAPPC4-208ENST00000527680 CADM3Q8N126 398 aa16.62■□□□□ 0.25
TRAPPC4-208ENST00000527680 MISP3Q96FF7 219 aa16.62■□□□□ 0.25
TRAPPC4-208ENST00000527680 FXYD6Q9H0Q3 95 aa16.62■□□□□ 0.25
TRAPPC4-208ENST00000527680 VCX3AQ9NNX9 186 aa16.62■□□□□ 0.25
TRAPPC4-208ENST00000527680 TP53TG1Q9Y2A0 90 aa16.62■□□□□ 0.25
TRAPPC4-208ENST00000527680 EPPK1P58107 5090 aaKnown RBP16.62■□□□□ 0.25
TRAPPC4-208ENST00000527680 K7EIM0 57 aa16.61■□□□□ 0.25
TRAPPC4-208ENST00000527680 CTSDP07339 412 aaPredicted RBP16.61■□□□□ 0.25
TRAPPC4-208ENST00000527680 ADMP35318 185 aa16.61■□□□□ 0.25
TRAPPC4-208ENST00000527680 WFDC3Q8IUB2 231 aa16.61■□□□□ 0.25
TRAPPC4-208ENST00000527680 OR4A16Q8NH70 328 aa16.61■□□□□ 0.25
TRAPPC4-208ENST00000527680 SLC25A46Q96AG3 418 aa16.61■□□□□ 0.25
TRAPPC4-208ENST00000527680 C15orf62A8K5M9 175 aa16.6■□□□□ 0.25
TRAPPC4-208ENST00000527680 CTSGP08311 255 aa16.6■□□□□ 0.25
TRAPPC4-208ENST00000527680 MFAP4P55083 255 aa16.6■□□□□ 0.25
TRAPPC4-208ENST00000527680 RELQ04864 619 aaPredicted RBP16.6■□□□□ 0.25
TRAPPC4-208ENST00000527680 ODF3L2Q3SX64 289 aa16.6■□□□□ 0.25
TRAPPC4-208ENST00000527680 H2BFWTQ7Z2G1 175 aa16.6■□□□□ 0.25
TRAPPC4-208ENST00000527680 OR1P1Q8NH06 330 aa16.6■□□□□ 0.25
TRAPPC4-208ENST00000527680 COMMD3Q9UBI1 195 aa16.6■□□□□ 0.25
TRAPPC4-208ENST00000527680 SMPXQ9UHP9 88 aa16.6■□□□□ 0.25
TRAPPC4-208ENST00000527680 HYDINQ4G0P3 5121 aa16.6■□□□□ 0.25
TRAPPC4-208ENST00000527680 KIR2DL5BA0A0G2JN68 375 aa16.59■□□□□ 0.25
TRAPPC4-208ENST00000527680 KIR2DL5BA0A0G2JPC4 375 aa16.59■□□□□ 0.25
TRAPPC4-208ENST00000527680 NUPR2A6NF83 97 aa16.59■□□□□ 0.25
TRAPPC4-208ENST00000527680 DBX1A6NMT0 343 aa16.59■□□□□ 0.25
TRAPPC4-208ENST00000527680 C15orf61A6NNL5 157 aa16.59■□□□□ 0.25
TRAPPC4-208ENST00000527680 F8W735 103 aaPredicted RBP16.59■□□□□ 0.25
TRAPPC4-208ENST00000527680 TNFRSF9Q07011 255 aa16.59■□□□□ 0.25
TRAPPC4-208ENST00000527680 TBC1D26Q86UD7 250 aa16.59■□□□□ 0.25
TRAPPC4-208ENST00000527680 KIR2DL5AQ8N109 375 aa16.59■□□□□ 0.25
TRAPPC4-208ENST00000527680 TMEM116Q8NCL8 245 aa16.59■□□□□ 0.25
TRAPPC4-208ENST00000527680 KIR2DL5BQ8NHK3 375 aa16.59■□□□□ 0.25
TRAPPC4-208ENST00000527680 GALNT14Q96FL9 552 aa16.59■□□□□ 0.25
TRAPPC4-208ENST00000527680 C6orf62Q9GZU0 229 aaPredicted RBP16.59■□□□□ 0.25
TRAPPC4-208ENST00000527680 TMEM14BQ9NUH8 114 aa16.59■□□□□ 0.25
TRAPPC4-208ENST00000527680 IGKV3-7A0A075B6H7 116 aa16.58■□□□□ 0.24
TRAPPC4-208ENST00000527680 IGHV3-49A0A0A0MS15 119 aa16.58■□□□□ 0.24
TRAPPC4-208ENST00000527680 EIF4EP06730 217 aaKnown RBP16.58■□□□□ 0.24
TRAPPC4-208ENST00000527680 TFPI2P48307 235 aa16.58■□□□□ 0.24
TRAPPC4-208ENST00000527680 SNX29P2Q8IUI4 249 aa16.58■□□□□ 0.24
TRAPPC4-208ENST00000527680 APRG1Q8IVJ8 170 aa16.58■□□□□ 0.24
TRAPPC4-208ENST00000527680 LINC00476Q8WZB0 136 aa16.58■□□□□ 0.24
TRAPPC4-208ENST00000527680 RNF183Q96D59 192 aa16.58■□□□□ 0.24
TRAPPC4-208ENST00000527680 YIPF6Q96EC8 236 aa16.58■□□□□ 0.24
TRAPPC4-208ENST00000527680 RNF2Q99496 336 aa16.58■□□□□ 0.24
TRAPPC4-208ENST00000527680 RHPN1-AS1Q9BWJ2 59 aa16.58■□□□□ 0.24
TRAPPC4-208ENST00000527680 IGHV3-48P01763 117 aa16.57■□□□□ 0.24
TRAPPC4-208ENST00000527680 EWSR1Q01844 656 aaKnown RBP eCLIP16.57■□□□□ 0.24
TRAPPC4-208ENST00000527680 GPX8Q8TED1 209 aa16.57■□□□□ 0.24
TRAPPC4-208ENST00000527680 PINX1Q96BK5 328 aaKnown RBP16.57■□□□□ 0.24
TRAPPC4-208ENST00000527680 CMTM3Q96MX0 182 aa16.57■□□□□ 0.24
TRAPPC4-208ENST00000527680 A0A087WXM4 84 aa16.56■□□□□ 0.24
TRAPPC4-208ENST00000527680 TRAV14DV4A0A0A6YYC5 116 aa16.56■□□□□ 0.24
TRAPPC4-208ENST00000527680 IGHV7-4-1A0A0J9YVY3 117 aa16.56■□□□□ 0.24
TRAPPC4-208ENST00000527680 CHEK1O14757 476 aa16.56■□□□□ 0.24
TRAPPC4-208ENST00000527680 CMC4P56277 68 aaPredicted RBP16.56■□□□□ 0.24
TRAPPC4-208ENST00000527680 ERHP84090 104 aaKnown RBP16.56■□□□□ 0.24
TRAPPC4-208ENST00000527680 CEMP1Q6PRD7 247 aaPredicted RBP16.56■□□□□ 0.24
TRAPPC4-208ENST00000527680 TMEM217Q8N7C4 229 aa16.56■□□□□ 0.24
TRAPPC4-208ENST00000527680 SEC22AQ96IW7 307 aa16.56■□□□□ 0.24
TRAPPC4-208ENST00000527680 TXN2Q99757 166 aa16.56■□□□□ 0.24
TRAPPC4-208ENST00000527680 MAP6D1Q9H9H5 199 aa16.56■□□□□ 0.24
TRAPPC4-208ENST00000527680 FAM212BQ9NTI7 297 aaPredicted RBP16.56■□□□□ 0.24
TRAPPC4-208ENST00000527680 KLK5Q9Y337 293 aaPredicted RBP16.56■□□□□ 0.24
TRAPPC4-208ENST00000527680 I3L2K1 104 aa16.55■□□□□ 0.24
TRAPPC4-208ENST00000527680 GNG7O60262 68 aa16.55■□□□□ 0.24
TRAPPC4-208ENST00000527680 MT-CO2P00403 227 aa16.55■□□□□ 0.24
TRAPPC4-208ENST00000527680 SCPEP1Q9HB40 452 aa16.55■□□□□ 0.24
TRAPPC4-208ENST00000527680 IGHV3OR16-13A0A075B7E8 117 aa16.54■□□□□ 0.24
TRAPPC4-208ENST00000527680 IGHV3-74A0A0B4J1X5 117 aa16.54■□□□□ 0.24
TRAPPC4-208ENST00000527680 APOA1P02647 267 aa16.54■□□□□ 0.24
TRAPPC4-208ENST00000527680 HSPE1P61604 102 aaKnown RBP16.54■□□□□ 0.24
TRAPPC4-208ENST00000527680 GBGT1Q8N5D6 347 aa16.54■□□□□ 0.24
TRAPPC4-208ENST00000527680 MRGPRFQ96AM1 343 aa16.54■□□□□ 0.24
TRAPPC4-208ENST00000527680 CSTL1Q9H114 145 aa16.54■□□□□ 0.24
TRAPPC4-208ENST00000527680 PGAM2P15259 253 aa16.53■□□□□ 0.24
TRAPPC4-208ENST00000527680 RCVRNP35243 200 aa16.53■□□□□ 0.24
TRAPPC4-208ENST00000527680 UCP3P55916 312 aa16.53■□□□□ 0.24
TRAPPC4-208ENST00000527680 PAFAH1B2P68402 229 aa16.53■□□□□ 0.24
TRAPPC4-208ENST00000527680 PRCDQ00LT1 54 aa16.53■□□□□ 0.24
TRAPPC4-208ENST00000527680 ZNF124Q15973 351 aa16.53■□□□□ 0.24
TRAPPC4-208ENST00000527680 NXF2Q9GZY0 626 aaKnown RBP16.53■□□□□ 0.24
TRAPPC4-208ENST00000527680 MPTX1A8MV57 137 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms