RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 CGAP01215 116 aa10.32□□□□□ -0.76
CAPN1-208ENST00000527323 PRDX2P32119 198 aa10.32□□□□□ -0.76
CAPN1-208ENST00000527323 VDAC2P45880 294 aaPredicted RBP10.32□□□□□ -0.76
CAPN1-208ENST00000527323 ZNF718Q3SXZ3 478 aa10.32□□□□□ -0.76
CAPN1-208ENST00000527323 TEPPQ6URK8 271 aa10.32□□□□□ -0.76
CAPN1-208ENST00000527323 GMPPAQ96IJ6 420 aaPredicted RBP10.32□□□□□ -0.76
CAPN1-208ENST00000527323 TMEM140Q9NV12 185 aa10.32□□□□□ -0.76
CAPN1-208ENST00000527323 EAF1Q96JC9 268 aaPredicted RBP10.32□□□□□ -0.76
CAPN1-208ENST00000527323 CLUHP3Q96NS8 147 aa10.32□□□□□ -0.76
CAPN1-208ENST00000527323 C20orf144Q9BQM9 153 aa10.32□□□□□ -0.76
CAPN1-208ENST00000527323 GCM1Q9NP62 436 aa10.32□□□□□ -0.76
CAPN1-208ENST00000527323 HELTA6NFD8 242 aa10.31□□□□□ -0.76
CAPN1-208ENST00000527323 DLEU1O43261 78 aa10.31□□□□□ -0.76
CAPN1-208ENST00000527323 GNG4P50150 75 aa10.31□□□□□ -0.76
CAPN1-208ENST00000527323 TCL1AP56279 114 aa10.31□□□□□ -0.76
CAPN1-208ENST00000527323 LGALS4P56470 323 aa10.31□□□□□ -0.76
CAPN1-208ENST00000527323 LINC00310P59036 64 aa10.31□□□□□ -0.76
CAPN1-208ENST00000527323 RPL19P84098 196 aaKnown RBP10.31□□□□□ -0.76
CAPN1-208ENST00000527323 TEX43Q6ZNM6 134 aa10.31□□□□□ -0.76
CAPN1-208ENST00000527323 TMEM178AQ8NBL3 297 aa10.31□□□□□ -0.76
CAPN1-208ENST00000527323 FAM208BQ5VWN6 2430 aa10.31□□□□□ -0.76
CAPN1-208ENST00000527323 A0A1B0GWJ7 208 aa10.31□□□□□ -0.76
CAPN1-208ENST00000527323 CRYBB3P26998 211 aa10.31□□□□□ -0.76
CAPN1-208ENST00000527323 RELBQ01201 579 aa10.31□□□□□ -0.76
CAPN1-208ENST00000527323 PSG5Q15238 335 aa10.31□□□□□ -0.76
CAPN1-208ENST00000527323 MORN2Q502X0 79 aa10.31□□□□□ -0.76
CAPN1-208ENST00000527323 CD177Q8N6Q3 437 aa10.31□□□□□ -0.76
CAPN1-208ENST00000527323 Q8TCH9 128 aa10.31□□□□□ -0.76
CAPN1-208ENST00000527323 SERTAD4Q9NUC0 356 aa10.31□□□□□ -0.76
CAPN1-208ENST00000527323 ZNF586Q9NXT0 402 aa10.31□□□□□ -0.76
CAPN1-208ENST00000527323 C15orf65H3BRN8 121 aa10.3□□□□□ -0.76
CAPN1-208ENST00000527323 YPEL1O60688 119 aa10.3□□□□□ -0.76
CAPN1-208ENST00000527323 NPY1RP25929 384 aa10.3□□□□□ -0.76
CAPN1-208ENST00000527323 INO80CQ6PI98 192 aaPredicted RBP10.3□□□□□ -0.76
CAPN1-208ENST00000527323 PQLC2Q6ZP29 291 aa10.3□□□□□ -0.76
CAPN1-208ENST00000527323 DOLPP1Q86YN1 238 aa10.3□□□□□ -0.76
CAPN1-208ENST00000527323 LEAP2Q969E1 77 aa10.3□□□□□ -0.76
CAPN1-208ENST00000527323 YPEL2Q96QA6 119 aa10.3□□□□□ -0.76
CAPN1-208ENST00000527323 TRAV9-1A0A075B6T8 112 aa10.3□□□□□ -0.76
CAPN1-208ENST00000527323 DIRC3C9JPN6 131 aa10.3□□□□□ -0.76
CAPN1-208ENST00000527323 NPSP0C0P6 89 aa10.3□□□□□ -0.76
CAPN1-208ENST00000527323 PMCHP20382 165 aa10.3□□□□□ -0.76
CAPN1-208ENST00000527323 AMTP48728 403 aa10.3□□□□□ -0.76
CAPN1-208ENST00000527323 FXYD3Q14802 87 aa10.3□□□□□ -0.76
CAPN1-208ENST00000527323 ARSJQ5FYB0 599 aaPredicted RBP10.3□□□□□ -0.76
CAPN1-208ENST00000527323 ZADH2Q8N4Q0 377 aa10.3□□□□□ -0.76
CAPN1-208ENST00000527323 RBMXL3Q8N7X1 1067 aaKnown RBP10.3□□□□□ -0.76
CAPN1-208ENST00000527323 ST6GALNAC3Q8NDV1 305 aa10.3□□□□□ -0.76
CAPN1-208ENST00000527323 CHODLQ9H9P2 273 aa10.3□□□□□ -0.76
CAPN1-208ENST00000527323 GNB4Q9HAV0 340 aa10.3□□□□□ -0.76
CAPN1-208ENST00000527323 DUSP13Q9UII6 198 aa10.3□□□□□ -0.76
CAPN1-208ENST00000527323 IGFBP2P18065 325 aa10.3□□□□□ -0.76
CAPN1-208ENST00000527323 BRS3P32247 399 aa10.3□□□□□ -0.76
CAPN1-208ENST00000527323 LY6DQ14210 128 aa10.3□□□□□ -0.76
CAPN1-208ENST00000527323 CENPWQ5EE01 88 aa10.3□□□□□ -0.76
CAPN1-208ENST00000527323 TRAT1Q6PIZ9 186 aa10.3□□□□□ -0.76
CAPN1-208ENST00000527323 MIR17HGQ75NE6 70 aa10.3□□□□□ -0.76
CAPN1-208ENST00000527323 OR52E5Q8NH55 327 aa10.3□□□□□ -0.76
CAPN1-208ENST00000527323 PPP1R35Q8TAP8 253 aa10.3□□□□□ -0.76
CAPN1-208ENST00000527323 TRGV10A0A0A0MS01 117 aa10.29□□□□□ -0.76
CAPN1-208ENST00000527323 MGST1P10620 155 aaKnown RBP10.29□□□□□ -0.76
CAPN1-208ENST00000527323 TIGITQ495A1 244 aa10.29□□□□□ -0.76
CAPN1-208ENST00000527323 VWA1Q6PCB0 445 aa10.29□□□□□ -0.76
CAPN1-208ENST00000527323 SLC24A4Q8NFF2 622 aa10.29□□□□□ -0.76
CAPN1-208ENST00000527323 OR2Z1Q8NG97 314 aa10.29□□□□□ -0.76
CAPN1-208ENST00000527323 RNASE7Q9H1E1 156 aaKnown RBP10.29□□□□□ -0.76
CAPN1-208ENST00000527323 OPN3Q9H1Y3 402 aaPredicted RBP10.29□□□□□ -0.76
CAPN1-208ENST00000527323 PLEKHA3Q9HB20 300 aa10.29□□□□□ -0.76
CAPN1-208ENST00000527323 IGHV3OR15-7A0A075B7D8 119 aa10.29□□□□□ -0.76
CAPN1-208ENST00000527323 FAM90A9PA6NNJ1 464 aa10.29□□□□□ -0.76
CAPN1-208ENST00000527323 PRSS46E5RG02 174 aa10.29□□□□□ -0.76
CAPN1-208ENST00000527323 OR7C2O60412 319 aa10.29□□□□□ -0.76
CAPN1-208ENST00000527323 ZNF253O75346 499 aa10.29□□□□□ -0.76
CAPN1-208ENST00000527323 CA2P00918 260 aa10.29□□□□□ -0.76
CAPN1-208ENST00000527323 TFPI2P48307 235 aa10.29□□□□□ -0.76
CAPN1-208ENST00000527323 TMPRSS3P57727 454 aa10.29□□□□□ -0.76
CAPN1-208ENST00000527323 FAM216AQ8WUB2 273 aa10.29□□□□□ -0.76
CAPN1-208ENST00000527323 FBXL7Q9UJT9 491 aa10.29□□□□□ -0.76
CAPN1-208ENST00000527323 TBL2Q9Y4P3 447 aaKnown RBP10.29□□□□□ -0.76
CAPN1-208ENST00000527323 GPX1P07203 203 aa10.28□□□□□ -0.76
CAPN1-208ENST00000527323 ZNF134P52741 427 aa10.28□□□□□ -0.76
CAPN1-208ENST00000527323 SUMO1P63165 101 aaKnown RBP10.28□□□□□ -0.76
CAPN1-208ENST00000527323 Q0VG73 95 aa10.28□□□□□ -0.76
CAPN1-208ENST00000527323 MRPL54Q6P161 138 aaKnown RBP10.28□□□□□ -0.76
CAPN1-208ENST00000527323 FAM122AQ96E09 287 aa10.28□□□□□ -0.76
CAPN1-208ENST00000527323 C1orf159Q96HA4 380 aa10.28□□□□□ -0.76
CAPN1-208ENST00000527323 LPAR2Q9HBW0 351 aa10.28□□□□□ -0.76
CAPN1-208ENST00000527323 MSRB2Q9Y3D2 182 aa10.28□□□□□ -0.76
CAPN1-208ENST00000527323 LSM4Q9Y4Z0 139 aaKnown RBP10.28□□□□□ -0.76
CAPN1-208ENST00000527323 V9GYV3 84 aa10.28□□□□□ -0.76
CAPN1-208ENST00000527323 TRAV17A0A0B4J275 112 aa10.28□□□□□ -0.76
CAPN1-208ENST00000527323 C9JCJ5 164 aa10.28□□□□□ -0.76
CAPN1-208ENST00000527323 ESDP10768 282 aa10.28□□□□□ -0.76
CAPN1-208ENST00000527323 MYOD1P15172 320 aa10.28□□□□□ -0.76
CAPN1-208ENST00000527323 ZNRF1Q8ND25 227 aa10.28□□□□□ -0.76
CAPN1-208ENST00000527323 OR4S2Q8NH73 311 aa10.28□□□□□ -0.76
CAPN1-208ENST00000527323 GNB1LQ9BYB4 327 aa10.28□□□□□ -0.76
CAPN1-208ENST00000527323 IL19Q9UHD0 177 aa10.28□□□□□ -0.76
CAPN1-208ENST00000527323 JPT1Q9UK76 154 aa10.28□□□□□ -0.76
CAPN1-208ENST00000527323 CSMD2Q7Z408 3487 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms