RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 CASTOR1Q8WTX7 329 aa8.4□□□□□ -1.06
NEDD8-204ENST00000526430 LSM10Q969L4 123 aaKnown RBP8.4□□□□□ -1.06
NEDD8-204ENST00000526430 QTRT1Q9BXR0 403 aaKnown RBP8.4□□□□□ -1.06
NEDD8-204ENST00000526430 SHPKQ9UHJ6 478 aa8.4□□□□□ -1.06
NEDD8-204ENST00000526430 KMT2AQ03164 3969 aa8.39□□□□□ -1.07
NEDD8-204ENST00000526430 NUDT19A8MXV4 375 aa8.39□□□□□ -1.07
NEDD8-204ENST00000526430 CCL24O00175 119 aa8.39□□□□□ -1.07
NEDD8-204ENST00000526430 ADAP1O75689 374 aa8.39□□□□□ -1.07
NEDD8-204ENST00000526430 CNIH1O95406 144 aa8.39□□□□□ -1.07
NEDD8-204ENST00000526430 BRI3O95415 125 aa8.39□□□□□ -1.07
NEDD8-204ENST00000526430 IL5P05113 134 aa8.39□□□□□ -1.07
NEDD8-204ENST00000526430 CRYGCP07315 174 aa8.39□□□□□ -1.07
NEDD8-204ENST00000526430 APELAP0DMC3 54 aa8.39□□□□□ -1.07
NEDD8-204ENST00000526430 VDAC1P21796 283 aa8.39□□□□□ -1.07
NEDD8-204ENST00000526430 VAMP1P23763 118 aa8.39□□□□□ -1.07
NEDD8-204ENST00000526430 RPL27AP46776 148 aaKnown RBP8.39□□□□□ -1.07
NEDD8-204ENST00000526430 MFAP2P55001 183 aa8.39□□□□□ -1.07
NEDD8-204ENST00000526430 ERVK-16P61578 105 aa8.39□□□□□ -1.07
NEDD8-204ENST00000526430 WT1-ASQ06250 92 aa8.39□□□□□ -1.07
NEDD8-204ENST00000526430 UNQ5815/PRO19632Q6UWF5 114 aa8.39□□□□□ -1.07
NEDD8-204ENST00000526430 ZNF695Q8IW36 515 aa8.39□□□□□ -1.07
NEDD8-204ENST00000526430 OR5T1Q8NG75 326 aa8.39□□□□□ -1.07
NEDD8-204ENST00000526430 IL17DQ8TAD2 202 aa8.39□□□□□ -1.07
NEDD8-204ENST00000526430 GATAD1Q8WUU5 269 aa8.39□□□□□ -1.07
NEDD8-204ENST00000526430 MITD1Q8WV92 249 aa8.39□□□□□ -1.07
NEDD8-204ENST00000526430 RAX2Q96IS3 184 aa8.39□□□□□ -1.07
NEDD8-204ENST00000526430 FANCD2OSQ96PS1 177 aa8.39□□□□□ -1.07
NEDD8-204ENST00000526430 FOXA2Q9Y261 457 aaPredicted RBP8.39□□□□□ -1.07
NEDD8-204ENST00000526430 OR51B2Q9Y5P1 312 aa8.39□□□□□ -1.07
NEDD8-204ENST00000526430 TRBV9A0A0B4J1U6 114 aa8.38□□□□□ -1.07
NEDD8-204ENST00000526430 SEC14L6B5MCN3 397 aa8.38□□□□□ -1.07
NEDD8-204ENST00000526430 INMT-MINDY4F8WBC2 141 aa8.38□□□□□ -1.07
NEDD8-204ENST00000526430 ST8SIA3O43173 380 aa8.38□□□□□ -1.07
NEDD8-204ENST00000526430 HLA-AP01891 365 aaKnown RBP8.38□□□□□ -1.07
NEDD8-204ENST00000526430 RPLP1P05386 114 aaKnown RBP8.38□□□□□ -1.07
NEDD8-204ENST00000526430 ELANEP08246 267 aa8.38□□□□□ -1.07
NEDD8-204ENST00000526430 CTRB1P17538 263 aa8.38□□□□□ -1.07
NEDD8-204ENST00000526430 INSL3P51460 131 aa8.38□□□□□ -1.07
NEDD8-204ENST00000526430 HSPE1P61604 102 aaKnown RBP8.38□□□□□ -1.07
NEDD8-204ENST00000526430 FOXE3Q13461 319 aa8.38□□□□□ -1.07
NEDD8-204ENST00000526430 ECSCRQ19T08 205 aa8.38□□□□□ -1.07
NEDD8-204ENST00000526430 GGNBP1Q5YKI7 109 aa8.38□□□□□ -1.07
NEDD8-204ENST00000526430 CTRB2Q6GPI1 263 aa8.38□□□□□ -1.07
NEDD8-204ENST00000526430 FAM219AQ8IW50 185 aa8.38□□□□□ -1.07
NEDD8-204ENST00000526430 ZNF431Q8TF32 576 aaPredicted RBP8.38□□□□□ -1.07
NEDD8-204ENST00000526430 LINC00476Q8WZB0 136 aa8.38□□□□□ -1.07
NEDD8-204ENST00000526430 COA4Q9NYJ1 87 aa8.38□□□□□ -1.07
NEDD8-204ENST00000526430 CACNG5Q9UF02 275 aa8.38□□□□□ -1.07
NEDD8-204ENST00000526430 PRNDQ9UKY0 176 aa8.38□□□□□ -1.07
NEDD8-204ENST00000526430 ZNF257Q9Y2Q1 563 aa8.38□□□□□ -1.07
NEDD8-204ENST00000526430 A0A1W2PN81 502 aa8.37□□□□□ -1.07
NEDD8-204ENST00000526430 SNAPC5O75971 98 aa8.37□□□□□ -1.07
NEDD8-204ENST00000526430 LY86O95711 162 aa8.37□□□□□ -1.07
NEDD8-204ENST00000526430 PRH1P02810 166 aa8.37□□□□□ -1.07
NEDD8-204ENST00000526430 TRAPPC2P0DI81 140 aa8.37□□□□□ -1.07
NEDD8-204ENST00000526430 TRAPPC2BP0DI82 140 aa8.37□□□□□ -1.07
NEDD8-204ENST00000526430 ANXA3P12429 323 aa8.37□□□□□ -1.07
NEDD8-204ENST00000526430 CHRNA7P36544 502 aa8.37□□□□□ -1.07
NEDD8-204ENST00000526430 RAB9AP51151 201 aa8.37□□□□□ -1.07
NEDD8-204ENST00000526430 AKR1C2P52895 323 aa8.37□□□□□ -1.07
NEDD8-204ENST00000526430 DEFA1P59665 94 aa8.37□□□□□ -1.07
NEDD8-204ENST00000526430 DEFA3P59666 94 aa8.37□□□□□ -1.07
NEDD8-204ENST00000526430 TMEM267Q0VDI3 215 aaPredicted RBP8.37□□□□□ -1.07
NEDD8-204ENST00000526430 IL15RAQ13261 267 aa8.37□□□□□ -1.07
NEDD8-204ENST00000526430 OXA1LQ15070 435 aa8.37□□□□□ -1.07
NEDD8-204ENST00000526430 C4orf46Q504U0 113 aa8.37□□□□□ -1.07
NEDD8-204ENST00000526430 PVRIGQ6DKI7 326 aa8.37□□□□□ -1.07
NEDD8-204ENST00000526430 TEX38Q6PEX7 206 aa8.37□□□□□ -1.07
NEDD8-204ENST00000526430 ZNF491Q8N8L2 437 aa8.37□□□□□ -1.07
NEDD8-204ENST00000526430 OR1L8Q8NGR8 309 aa8.37□□□□□ -1.07
NEDD8-204ENST00000526430 OR5B3Q8NH48 314 aa8.37□□□□□ -1.07
NEDD8-204ENST00000526430 OR52E5Q8NH55 327 aa8.37□□□□□ -1.07
NEDD8-204ENST00000526430 ENKURQ8TC29 256 aa8.37□□□□□ -1.07
NEDD8-204ENST00000526430 OR10C1Q96KK4 312 aa8.37□□□□□ -1.07
NEDD8-204ENST00000526430 TMEM68Q96MH6 324 aa8.37□□□□□ -1.07
NEDD8-204ENST00000526430 FYTTD1Q96QD9 318 aaKnown RBP8.37□□□□□ -1.07
NEDD8-204ENST00000526430 SPIN2AQ99865 258 aa8.37□□□□□ -1.07
NEDD8-204ENST00000526430 SPIN2BQ9BPZ2 258 aa8.37□□□□□ -1.07
NEDD8-204ENST00000526430 COMMD5Q9GZQ3 224 aa8.37□□□□□ -1.07
NEDD8-204ENST00000526430 DNAH10Q8IVF4 4471 aa8.37□□□□□ -1.07
NEDD8-204ENST00000526430 DUXBA0A1W2PPF3 345 aa8.36□□□□□ -1.07
NEDD8-204ENST00000526430 NPIPB5A8MRT5 1133 aa8.36□□□□□ -1.07
NEDD8-204ENST00000526430 INS-IGF2F8WCM5 200 aa8.36□□□□□ -1.07
NEDD8-204ENST00000526430 CREBL2O60519 120 aaPredicted RBP8.36□□□□□ -1.07
NEDD8-204ENST00000526430 PTTG1O95997 202 aa8.36□□□□□ -1.07
NEDD8-204ENST00000526430 HOXB5P09067 269 aa8.36□□□□□ -1.07
NEDD8-204ENST00000526430 SLC25A6P12236 298 aa8.36□□□□□ -1.07
NEDD8-204ENST00000526430 PSMB6P28072 239 aa8.36□□□□□ -1.07
NEDD8-204ENST00000526430 SRPXP78539 464 aa8.36□□□□□ -1.07
NEDD8-204ENST00000526430 PRCDQ00LT1 54 aa8.36□□□□□ -1.07
NEDD8-204ENST00000526430 ID3Q02535 119 aa8.36□□□□□ -1.07
NEDD8-204ENST00000526430 SPINK9Q5DT21 86 aa8.36□□□□□ -1.07
NEDD8-204ENST00000526430 CXorf66Q5JRM2 361 aaPredicted RBP8.36□□□□□ -1.07
NEDD8-204ENST00000526430 OR2C3Q8N628 320 aa8.36□□□□□ -1.07
NEDD8-204ENST00000526430 COMMD1Q8N668 190 aa8.36□□□□□ -1.07
NEDD8-204ENST00000526430 OR4A16Q8NH70 328 aa8.36□□□□□ -1.07
NEDD8-204ENST00000526430 TMEM170AQ8WVE7 144 aa8.36□□□□□ -1.07
NEDD8-204ENST00000526430 RRNAD1Q96FB5 475 aaKnown RBP8.36□□□□□ -1.07
NEDD8-204ENST00000526430 WDR89Q96FK6 387 aaPredicted RBP8.36□□□□□ -1.07
NEDD8-204ENST00000526430 MS4A10Q96PG2 267 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms