RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 C14orf166Q9Y224 244 aaKnown RBP4.92□□□□□ -1.62
CD44-221ENST00000526000 DMRT1Q9Y5R6 373 aa4.92□□□□□ -1.62
CD44-221ENST00000526000 HYDINQ4G0P3 5121 aa4.92□□□□□ -1.62
CD44-221ENST00000526000 TRBV9A0A0B4J1U6 114 aa4.91□□□□□ -1.62
CD44-221ENST00000526000 IGKV1D-13A0A0B4J2D9 117 aa4.91□□□□□ -1.62
CD44-221ENST00000526000 FAM223BA6NKX1 122 aa4.91□□□□□ -1.62
CD44-221ENST00000526000 SPRY2O43597 315 aa4.91□□□□□ -1.62
CD44-221ENST00000526000 ATG12O94817 140 aa4.91□□□□□ -1.62
CD44-221ENST00000526000 CLEC3BP05452 202 aa4.91□□□□□ -1.62
CD44-221ENST00000526000 IL6RP08887 468 aaPredicted RBP4.91□□□□□ -1.62
CD44-221ENST00000526000 FGF2P09038 288 aa4.91□□□□□ -1.62
CD44-221ENST00000526000 SAA1P0DJI8 122 aaPredicted RBP4.91□□□□□ -1.62
CD44-221ENST00000526000 IGKV1-13P0DP09 117 aa4.91□□□□□ -1.62
CD44-221ENST00000526000 PGAM2P15259 253 aa4.91□□□□□ -1.62
CD44-221ENST00000526000 GNRHRP30968 328 aa4.91□□□□□ -1.62
CD44-221ENST00000526000 ARL3P36405 182 aa4.91□□□□□ -1.62
CD44-221ENST00000526000 FXYD4P59646 89 aa4.91□□□□□ -1.62
CD44-221ENST00000526000 UBE2KP61086 200 aa4.91□□□□□ -1.62
CD44-221ENST00000526000 RPL30P62888 115 aaKnown RBP4.91□□□□□ -1.62
CD44-221ENST00000526000 DEFB135Q30KP9 77 aa4.91□□□□□ -1.62
CD44-221ENST00000526000 SCGB2B2Q4G0G5 96 aa4.91□□□□□ -1.62
CD44-221ENST00000526000 FAM106AQ4KMX7 169 aa4.91□□□□□ -1.62
CD44-221ENST00000526000 CEMP1Q6PRD7 247 aaPredicted RBP4.91□□□□□ -1.62
CD44-221ENST00000526000 BTNL8Q6UX41 500 aa4.91□□□□□ -1.62
CD44-221ENST00000526000 LYG2Q86SG7 212 aa4.91□□□□□ -1.62
CD44-221ENST00000526000 FAM223AQ8IWN6 122 aa4.91□□□□□ -1.62
CD44-221ENST00000526000 TTC9CQ8N5M4 171 aa4.91□□□□□ -1.62
CD44-221ENST00000526000 OR51S1Q8NGJ8 323 aa4.91□□□□□ -1.62
CD44-221ENST00000526000 OR4S2Q8NH73 311 aa4.91□□□□□ -1.62
CD44-221ENST00000526000 OSR1Q8TAX0 266 aaPredicted RBP4.91□□□□□ -1.62
CD44-221ENST00000526000 FXYD6Q9H0Q3 95 aa4.91□□□□□ -1.62
CD44-221ENST00000526000 GPR132Q9UNW8 380 aa4.91□□□□□ -1.62
CD44-221ENST00000526000 CSMD3Q7Z407 3707 aa4.9□□□□□ -1.62
CD44-221ENST00000526000 PLECQ15149 4684 aaKnown RBP4.9□□□□□ -1.62
CD44-221ENST00000526000 IGHV3OR16-8A0A075B7F1 116 aa4.9□□□□□ -1.63
CD44-221ENST00000526000 IGHV3-21A0A0B4J1V1 117 aa4.9□□□□□ -1.63
CD44-221ENST00000526000 FAM240BA0A1B0GVZ2 78 aa4.9□□□□□ -1.63
CD44-221ENST00000526000 A0A1B0GW64 132 aa4.9□□□□□ -1.63
CD44-221ENST00000526000 TMEM213A2RRL7 107 aa4.9□□□□□ -1.63
CD44-221ENST00000526000 ZNF207O43670 478 aaKnown RBP4.9□□□□□ -1.63
CD44-221ENST00000526000 CREBL2O60519 120 aaPredicted RBP4.9□□□□□ -1.63
CD44-221ENST00000526000 PGLYRP1O75594 196 aaPredicted RBP4.9□□□□□ -1.63
CD44-221ENST00000526000 NDUFB6O95139 128 aa4.9□□□□□ -1.63
CD44-221ENST00000526000 IGLV2-14P01704 120 aa4.9□□□□□ -1.63
CD44-221ENST00000526000 ANXA3P12429 323 aa4.9□□□□□ -1.63
CD44-221ENST00000526000 DEFA4P12838 97 aa4.9□□□□□ -1.63
CD44-221ENST00000526000 AREGP15514 252 aa4.9□□□□□ -1.63
CD44-221ENST00000526000 F2RP25116 425 aa4.9□□□□□ -1.63
CD44-221ENST00000526000 SRPXP78539 464 aa4.9□□□□□ -1.63
CD44-221ENST00000526000 DHODHQ02127 395 aa4.9□□□□□ -1.63
CD44-221ENST00000526000 EIF4EBP1Q13541 118 aaPredicted RBP4.9□□□□□ -1.63
CD44-221ENST00000526000 TMEM128Q5BJH2 165 aa4.9□□□□□ -1.63
CD44-221ENST00000526000 UNQ9165/PRO28630Q6UXU0 137 aa4.9□□□□□ -1.63
CD44-221ENST00000526000 ZNF818PQ6ZRF7 136 aa4.9□□□□□ -1.63
CD44-221ENST00000526000 RBPMS2Q6ZRY4 209 aaKnown RBP4.9□□□□□ -1.63
CD44-221ENST00000526000 MMD2Q8IY49 270 aa4.9□□□□□ -1.63
CD44-221ENST00000526000 NECAP1Q8NC96 275 aa4.9□□□□□ -1.63
CD44-221ENST00000526000 DUSP18Q8NEJ0 188 aa4.9□□□□□ -1.63
CD44-221ENST00000526000 OR4D10Q8NGI6 311 aa4.9□□□□□ -1.63
CD44-221ENST00000526000 OR13C8Q8NGS7 320 aa4.9□□□□□ -1.63
CD44-221ENST00000526000 OR5B3Q8NH48 314 aa4.9□□□□□ -1.63
CD44-221ENST00000526000 VSTM2AQ8TAG5 236 aa4.9□□□□□ -1.63
CD44-221ENST00000526000 GALNT14Q96FL9 552 aa4.9□□□□□ -1.63
CD44-221ENST00000526000 FANCD2OSQ96PS1 177 aa4.9□□□□□ -1.63
CD44-221ENST00000526000 LYSTQ99698 3801 aa4.9□□□□□ -1.63
CD44-221ENST00000526000 SPIN2AQ99865 258 aa4.9□□□□□ -1.63
CD44-221ENST00000526000 SPIN2BQ9BPZ2 258 aa4.9□□□□□ -1.63
CD44-221ENST00000526000 CCL28Q9NRJ3 127 aa4.9□□□□□ -1.63
CD44-221ENST00000526000 SLC2A9Q9NRM0 540 aa4.9□□□□□ -1.63
CD44-221ENST00000526000 TECRQ9NZ01 308 aaKnown RBP4.9□□□□□ -1.63
CD44-221ENST00000526000 COMMD9Q9P000 198 aa4.9□□□□□ -1.63
CD44-221ENST00000526000 CACFD1Q9UGQ2 172 aa4.9□□□□□ -1.63
CD44-221ENST00000526000 KCNIP3Q9Y2W7 256 aa4.9□□□□□ -1.63
CD44-221ENST00000526000 IGKV3-7A0A075B6H7 116 aa4.89□□□□□ -1.63
CD44-221ENST00000526000 MFSD2BA6NFX1 497 aa4.89□□□□□ -1.63
CD44-221ENST00000526000 CRYM-AS1A6NIL9 109 aa4.89□□□□□ -1.63
CD44-221ENST00000526000 TEX22C9J3V5 150 aa4.89□□□□□ -1.63
CD44-221ENST00000526000 DEFB4AO15263 64 aa4.89□□□□□ -1.63
CD44-221ENST00000526000 PLA2G10O15496 165 aa4.89□□□□□ -1.63
CD44-221ENST00000526000 TNFSF12O43508 249 aa4.89□□□□□ -1.63
CD44-221ENST00000526000 PTTG1O95997 202 aa4.89□□□□□ -1.63
CD44-221ENST00000526000 HPRT1P00492 218 aa4.89□□□□□ -1.63
CD44-221ENST00000526000 HRASP01112 189 aa4.89□□□□□ -1.63
CD44-221ENST00000526000 RPL27AP46776 148 aaKnown RBP4.89□□□□□ -1.63
CD44-221ENST00000526000 TFPI2P48307 235 aa4.89□□□□□ -1.63
CD44-221ENST00000526000 PIGPP57054 158 aa4.89□□□□□ -1.63
CD44-221ENST00000526000 ZNF124Q15973 351 aa4.89□□□□□ -1.63
CD44-221ENST00000526000 POU2AF1Q16633 256 aa4.89□□□□□ -1.63
CD44-221ENST00000526000 FAAP20Q6NZ36 180 aa4.89□□□□□ -1.63
CD44-221ENST00000526000 SLC25A42Q86VD7 318 aa4.89□□□□□ -1.63
CD44-221ENST00000526000 GPHB5Q86YW7 130 aa4.89□□□□□ -1.63
CD44-221ENST00000526000 CENPSQ8N2Z9 138 aa4.89□□□□□ -1.63
CD44-221ENST00000526000 OR1L6Q8NGR2 347 aa4.89□□□□□ -1.63
CD44-221ENST00000526000 ENKURQ8TC29 256 aa4.89□□□□□ -1.63
CD44-221ENST00000526000 MARCH1Q8TCQ1 289 aa4.89□□□□□ -1.63
CD44-221ENST00000526000 PHLDA1Q8WV24 401 aaPredicted RBP4.89□□□□□ -1.63
CD44-221ENST00000526000 TCTEX1D2Q8WW35 142 aa4.89□□□□□ -1.63
CD44-221ENST00000526000 IL22RA2Q969J5 263 aa4.89□□□□□ -1.63
CD44-221ENST00000526000 CCDC140Q96MF4 163 aa4.89□□□□□ -1.63
CD44-221ENST00000526000 C5orf66Q9H5L9 145 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms