RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 IGKV3-7A0A075B6H7 116 aa17.6■□□□□ 0.41
USP47-205ENST00000525257 IGHV3-49A0A0A0MS15 119 aa17.6■□□□□ 0.41
USP47-205ENST00000525257 GNRHRP30968 328 aa17.6■□□□□ 0.41
USP47-205ENST00000525257 IDNKQ5T6J7 187 aa17.6■□□□□ 0.41
USP47-205ENST00000525257 GATAD1Q8WUU5 269 aa17.6■□□□□ 0.41
USP47-205ENST00000525257 RHPN1-AS1Q9BWJ2 59 aa17.6■□□□□ 0.41
USP47-205ENST00000525257 IGHV7-4-1A0A0J9YVY3 117 aa17.59■□□□□ 0.41
USP47-205ENST00000525257 CHEK1O14757 476 aa17.59■□□□□ 0.41
USP47-205ENST00000525257 KRASP01116 189 aa17.59■□□□□ 0.41
USP47-205ENST00000525257 CTSGP08311 255 aa17.59■□□□□ 0.41
USP47-205ENST00000525257 SPARTQ8N0X7 666 aa17.59■□□□□ 0.41
USP47-205ENST00000525257 C11orf45Q8TAV5 145 aa17.59■□□□□ 0.41
USP47-205ENST00000525257 ZNF414Q96IQ9 312 aa17.59■□□□□ 0.41
USP47-205ENST00000525257 RNF167Q9H6Y7 350 aa17.59■□□□□ 0.41
USP47-205ENST00000525257 A0A0A6YYH2 397 aa17.58■□□□□ 0.4
USP47-205ENST00000525257 A6NJ64 397 aa17.58■□□□□ 0.4
USP47-205ENST00000525257 F2RP25116 425 aa17.58■□□□□ 0.4
USP47-205ENST00000525257 G6PCP35575 357 aa17.58■□□□□ 0.4
USP47-205ENST00000525257 LPAR6P43657 344 aa17.58■□□□□ 0.4
USP47-205ENST00000525257 SCAND1P57086 179 aa17.58■□□□□ 0.4
USP47-205ENST00000525257 RBMS2Q15434 407 aaKnown RBP17.58■□□□□ 0.4
USP47-205ENST00000525257 TMEM116Q8NCL8 245 aa17.58■□□□□ 0.4
USP47-205ENST00000525257 OR11H2Q8NH07 326 aa17.58■□□□□ 0.4
USP47-205ENST00000525257 FCAMRQ8WWV6 532 aa17.58■□□□□ 0.4
USP47-205ENST00000525257 BORCS5Q969J3 196 aa17.58■□□□□ 0.4
USP47-205ENST00000525257 MFFQ9GZY8 342 aa17.58■□□□□ 0.4
USP47-205ENST00000525257 EHFQ9NZC4 300 aa17.58■□□□□ 0.4
USP47-205ENST00000525257 MRPS14O60783 128 aaKnown RBP17.57■□□□□ 0.4
USP47-205ENST00000525257 SNAPC5O75971 98 aa17.57■□□□□ 0.4
USP47-205ENST00000525257 YIF1AO95070 293 aa17.57■□□□□ 0.4
USP47-205ENST00000525257 IFNA4P05014 189 aa17.57■□□□□ 0.4
USP47-205ENST00000525257 CBX5P45973 191 aa17.57■□□□□ 0.4
USP47-205ENST00000525257 RELQ04864 619 aaPredicted RBP17.57■□□□□ 0.4
USP47-205ENST00000525257 GBGT1Q8N5D6 347 aa17.57■□□□□ 0.4
USP47-205ENST00000525257 C11orf68Q9H3H3 251 aaKnown RBP17.57■□□□□ 0.4
USP47-205ENST00000525257 DIABLOQ9NR28 239 aa17.57■□□□□ 0.4
USP47-205ENST00000525257 IGHV3OR16-13A0A075B7E8 117 aa17.56■□□□□ 0.4
USP47-205ENST00000525257 IGHV3-74A0A0B4J1X5 117 aa17.56■□□□□ 0.4
USP47-205ENST00000525257 NUPL2O15504 423 aaKnown RBP17.56■□□□□ 0.4
USP47-205ENST00000525257 PGLYRP1O75594 196 aaPredicted RBP17.56■□□□□ 0.4
USP47-205ENST00000525257 CMC4P56277 68 aaPredicted RBP17.56■□□□□ 0.4
USP47-205ENST00000525257 PRR20EP86478 221 aa17.56■□□□□ 0.4
USP47-205ENST00000525257 PRR20CP86479 221 aa17.56■□□□□ 0.4
USP47-205ENST00000525257 PRR20DP86480 221 aa17.56■□□□□ 0.4
USP47-205ENST00000525257 PRR20BP86481 221 aa17.56■□□□□ 0.4
USP47-205ENST00000525257 PRR20AP86496 221 aa17.56■□□□□ 0.4
USP47-205ENST00000525257 FCGR1BQ92637 280 aa17.56■□□□□ 0.4
USP47-205ENST00000525257 TMEM56Q96MV1 263 aa17.56■□□□□ 0.4
USP47-205ENST00000525257 IFT46Q9NQC8 304 aa17.56■□□□□ 0.4
USP47-205ENST00000525257 DEFB4AO15263 64 aa17.55■□□□□ 0.4
USP47-205ENST00000525257 RFX2P48378 723 aa17.55■□□□□ 0.4
USP47-205ENST00000525257 TSPAN14Q8NG11 270 aa17.55■□□□□ 0.4
USP47-205ENST00000525257 DGCR14Q96DF8 476 aaKnown RBP17.55■□□□□ 0.4
USP47-205ENST00000525257 MISP3Q96FF7 219 aa17.55■□□□□ 0.4
USP47-205ENST00000525257 ZNF2Q9BSG1 426 aaPredicted RBP17.55■□□□□ 0.4
USP47-205ENST00000525257 PRNDQ9UKY0 176 aa17.55■□□□□ 0.4
USP47-205ENST00000525257 RAB26Q9ULW5 256 aa17.55■□□□□ 0.4
USP47-205ENST00000525257 DBX1A6NMT0 343 aa17.54■□□□□ 0.4
USP47-205ENST00000525257 OR1P1Q8NH06 330 aa17.54■□□□□ 0.4
USP47-205ENST00000525257 SLC25A46Q96AG3 418 aa17.54■□□□□ 0.4
USP47-205ENST00000525257 MOB3AQ96BX8 217 aa17.54■□□□□ 0.4
USP47-205ENST00000525257 OR10C1Q96KK4 312 aa17.54■□□□□ 0.4
USP47-205ENST00000525257 CMTM3Q96MX0 182 aa17.54■□□□□ 0.4
USP47-205ENST00000525257 LOC100506127A0A0U1RQW1 187 aa17.53■□□□□ 0.4
USP47-205ENST00000525257 CA1P00915 261 aaPredicted RBP17.53■□□□□ 0.4
USP47-205ENST00000525257 C2CD4CQ8TF44 421 aa17.53■□□□□ 0.4
USP47-205ENST00000525257 FXYD6Q9H0Q3 95 aa17.53■□□□□ 0.4
USP47-205ENST00000525257 PCLOQ9Y6V0 5065 aa17.53■□□□□ 0.4
USP47-205ENST00000525257 KIAA1109Q2LD37 5005 aa17.52■□□□□ 0.4
USP47-205ENST00000525257 TRAV14DV4A0A0A6YYC5 116 aa17.52■□□□□ 0.4
USP47-205ENST00000525257 C15orf61A6NNL5 157 aa17.52■□□□□ 0.4
USP47-205ENST00000525257 I3L2K1 104 aa17.52■□□□□ 0.4
USP47-205ENST00000525257 IGHV3-48P01763 117 aa17.52■□□□□ 0.4
USP47-205ENST00000525257 PMP2P02689 132 aa17.52■□□□□ 0.4
USP47-205ENST00000525257 MFAP4P55083 255 aa17.52■□□□□ 0.4
USP47-205ENST00000525257 FAM90A2PQ658T7 463 aa17.52■□□□□ 0.4
USP47-205ENST00000525257 DHRS11Q6UWP2 260 aa17.52■□□□□ 0.4
USP47-205ENST00000525257 TCF24Q7RTU0 167 aa17.52■□□□□ 0.4
USP47-205ENST00000525257 CADM3Q8N126 398 aa17.52■□□□□ 0.4
USP47-205ENST00000525257 TMEM14BQ9NUH8 114 aa17.52■□□□□ 0.4
USP47-205ENST00000525257 FKBP11Q9NYL4 201 aa17.52■□□□□ 0.4
USP47-205ENST00000525257 CMTM1Q8IZ96 169 aa17.51■□□□□ 0.39
USP47-205ENST00000525257 NXF2Q9GZY0 626 aaKnown RBP17.51■□□□□ 0.39
USP47-205ENST00000525257 MT-CO2P00403 227 aa17.5■□□□□ 0.39
USP47-205ENST00000525257 PAFAH1B2P68402 229 aa17.5■□□□□ 0.39
USP47-205ENST00000525257 TMEM187Q14656 261 aa17.5■□□□□ 0.39
USP47-205ENST00000525257 TSC22D3Q99576 134 aa17.5■□□□□ 0.39
USP47-205ENST00000525257 TXN2Q99757 166 aa17.5■□□□□ 0.39
USP47-205ENST00000525257 GPR31O00270 319 aa17.49■□□□□ 0.39
USP47-205ENST00000525257 XRCC3O43542 346 aa17.49■□□□□ 0.39
USP47-205ENST00000525257 EIF4EP06730 217 aaKnown RBP17.49■□□□□ 0.39
USP47-205ENST00000525257 LEMD1Q68G75 181 aa17.49■□□□□ 0.39
USP47-205ENST00000525257 OR5H2Q8NGV7 314 aa17.49■□□□□ 0.39
USP47-205ENST00000525257 ST8SIA2Q92186 375 aa17.49■□□□□ 0.39
USP47-205ENST00000525257 PINX1Q96BK5 328 aaKnown RBP17.49■□□□□ 0.39
USP47-205ENST00000525257 GNG7O60262 68 aa17.48■□□□□ 0.39
USP47-205ENST00000525257 PHLDA2Q53GA4 152 aa17.48■□□□□ 0.39
USP47-205ENST00000525257 GINS3Q9BRX5 216 aa17.48■□□□□ 0.39
USP47-205ENST00000525257 ANAPC10Q9UM13 185 aa17.48■□□□□ 0.39
USP47-205ENST00000525257 IGHV3-66A0A0C4DH42 116 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms