RNA–Protein interactions for RNA: ENST00000518371.2

MRPS28-203, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-203ENST00000518371 FKBP11Q9NYL4 201 aa4.71□□□□□ -1.66
MRPS28-203ENST00000518371 PEF1Q9UBV8 284 aaKnown RBP4.71□□□□□ -1.66
MRPS28-203ENST00000518371 PRNDQ9UKY0 176 aa4.71□□□□□ -1.66
MRPS28-203ENST00000518371 ZNF257Q9Y2Q1 563 aa4.71□□□□□ -1.66
MRPS28-203ENST00000518371 NSG2Q9Y328 171 aa4.71□□□□□ -1.66
MRPS28-203ENST00000518371 OR51B2Q9Y5P1 312 aa4.71□□□□□ -1.66
MRPS28-203ENST00000518371 IGHV4OR15-8A0A075B7B6 117 aa4.7□□□□□ -1.66
MRPS28-203ENST00000518371 A0A087WW49 117 aa4.7□□□□□ -1.66
MRPS28-203ENST00000518371 FAM223BA6NKX1 122 aa4.7□□□□□ -1.66
MRPS28-203ENST00000518371 NPIPB5A8MRT5 1133 aa4.7□□□□□ -1.66
MRPS28-203ENST00000518371 SEC14L6B5MCN3 397 aa4.7□□□□□ -1.66
MRPS28-203ENST00000518371 TEX22C9J3V5 150 aa4.7□□□□□ -1.66
MRPS28-203ENST00000518371 H0Y980 276 aa4.7□□□□□ -1.66
MRPS28-203ENST00000518371 OVOL1O14753 267 aa4.7□□□□□ -1.66
MRPS28-203ENST00000518371 CYB5BO43169 146 aa4.7□□□□□ -1.66
MRPS28-203ENST00000518371 B3GALNT1O75752 331 aa4.7□□□□□ -1.66
MRPS28-203ENST00000518371 PRB2P02812 416 aaPredicted RBP4.7□□□□□ -1.66
MRPS28-203ENST00000518371 REG1AP05451 166 aa4.7□□□□□ -1.66
MRPS28-203ENST00000518371 OR13C7P0DN81 318 aa4.7□□□□□ -1.66
MRPS28-203ENST00000518371 HIST1H1BP16401 226 aaKnown RBP4.7□□□□□ -1.66
MRPS28-203ENST00000518371 AKR1C4P17516 323 aa4.7□□□□□ -1.66
MRPS28-203ENST00000518371 ZP3P21754 424 aa4.7□□□□□ -1.66
MRPS28-203ENST00000518371 HOXD3P31249 432 aaPredicted RBP4.7□□□□□ -1.66
MRPS28-203ENST00000518371 ETV6P41212 452 aa4.7□□□□□ -1.66
MRPS28-203ENST00000518371 AKR1C2P52895 323 aa4.7□□□□□ -1.66
MRPS28-203ENST00000518371 OR2B8PP59922 312 aa4.7□□□□□ -1.66
MRPS28-203ENST00000518371 DEFA5Q01523 94 aa4.7□□□□□ -1.66
MRPS28-203ENST00000518371 DHODHQ02127 395 aa4.7□□□□□ -1.66
MRPS28-203ENST00000518371 FHL3Q13643 280 aa4.7□□□□□ -1.66
MRPS28-203ENST00000518371 TATDN3Q17R31 274 aa4.7□□□□□ -1.66
MRPS28-203ENST00000518371 C9orf66Q5T8R8 295 aa4.7□□□□□ -1.66
MRPS28-203ENST00000518371 TRIQKQ629K1 86 aa4.7□□□□□ -1.66
MRPS28-203ENST00000518371 SLC25A24Q6NUK1 477 aa4.7□□□□□ -1.66
MRPS28-203ENST00000518371 HSD17B13Q7Z5P4 300 aaPredicted RBP4.7□□□□□ -1.66
MRPS28-203ENST00000518371 FAM223AQ8IWN6 122 aa4.7□□□□□ -1.66
MRPS28-203ENST00000518371 CADM3Q8N126 398 aa4.7□□□□□ -1.66
MRPS28-203ENST00000518371 NECAP1Q8NC96 275 aa4.7□□□□□ -1.66
MRPS28-203ENST00000518371 RNASE11Q8TAA1 199 aaKnown RBP4.7□□□□□ -1.66
MRPS28-203ENST00000518371 DLX4Q92988 240 aaPredicted RBP4.7□□□□□ -1.66
MRPS28-203ENST00000518371 MRGPRFQ96AM1 343 aa4.7□□□□□ -1.66
MRPS28-203ENST00000518371 RRNAD1Q96FB5 475 aaKnown RBP4.7□□□□□ -1.66
MRPS28-203ENST00000518371 SEC22AQ96IW7 307 aa4.7□□□□□ -1.66
MRPS28-203ENST00000518371 C16orf92Q96LL3 132 aa4.7□□□□□ -1.66
MRPS28-203ENST00000518371 TMEM56Q96MV1 263 aa4.7□□□□□ -1.66
MRPS28-203ENST00000518371 TP53RKQ96S44 253 aa4.7□□□□□ -1.66
MRPS28-203ENST00000518371 SRSF8Q9BRL6 282 aaKnown RBP4.7□□□□□ -1.66
MRPS28-203ENST00000518371 RTBDNQ9BSG5 229 aaPredicted RBP4.7□□□□□ -1.66
MRPS28-203ENST00000518371 QTRT1Q9BXR0 403 aaKnown RBP4.7□□□□□ -1.66
MRPS28-203ENST00000518371 AKIP1Q9NQ31 210 aa4.7□□□□□ -1.66
MRPS28-203ENST00000518371 ZMAT5Q9UDW3 170 aaKnown RBP4.7□□□□□ -1.66
MRPS28-203ENST00000518371 GPR132Q9UNW8 380 aa4.7□□□□□ -1.66
MRPS28-203ENST00000518371 KCNIP3Q9Y2W7 256 aa4.7□□□□□ -1.66
MRPS28-203ENST00000518371 V9GYH0 126 aa4.7□□□□□ -1.66
MRPS28-203ENST00000518371 TRRAPQ9Y4A5 3859 aa4.69□□□□□ -1.66
MRPS28-203ENST00000518371 TRBV9A0A0B4J1U6 114 aa4.69□□□□□ -1.66
MRPS28-203ENST00000518371 LINC00854A0A1B0GVQ3 168 aa4.69□□□□□ -1.66
MRPS28-203ENST00000518371 A0A1B0GW64 132 aa4.69□□□□□ -1.66
MRPS28-203ENST00000518371 CGB1A6NKQ9 187 aa4.69□□□□□ -1.66
MRPS28-203ENST00000518371 NDUFB8O95169 186 aa4.69□□□□□ -1.66
MRPS28-203ENST00000518371 IGKV1-39P01597 117 aa4.69□□□□□ -1.66
MRPS28-203ENST00000518371 IGKV1D-39P04432 117 aa4.69□□□□□ -1.66
MRPS28-203ENST00000518371 CRYGCP07315 174 aa4.69□□□□□ -1.66
MRPS28-203ENST00000518371 FGF2P09038 288 aa4.69□□□□□ -1.66
MRPS28-203ENST00000518371 CTRB1P17538 263 aa4.69□□□□□ -1.66
MRPS28-203ENST00000518371 UCP1P25874 307 aa4.69□□□□□ -1.66
MRPS28-203ENST00000518371 HSPE1P61604 102 aaKnown RBP4.69□□□□□ -1.66
MRPS28-203ENST00000518371 ZNF45Q02386 682 aa4.69□□□□□ -1.66
MRPS28-203ENST00000518371 EXOSC2Q13868 293 aaKnown RBP4.69□□□□□ -1.66
MRPS28-203ENST00000518371 KLF9Q13886 244 aaPredicted RBP4.69□□□□□ -1.66
MRPS28-203ENST00000518371 ZNF79Q15937 498 aa4.69□□□□□ -1.66
MRPS28-203ENST00000518371 RPEL1Q2QD12 228 aa4.69□□□□□ -1.66
MRPS28-203ENST00000518371 C15orf32Q32M92 178 aa4.69□□□□□ -1.66
MRPS28-203ENST00000518371 DEFB121Q5J5C9 76 aa4.69□□□□□ -1.66
MRPS28-203ENST00000518371 KPRPQ5T749 579 aaPredicted RBP4.69□□□□□ -1.66
MRPS28-203ENST00000518371 CTRB2Q6GPI1 263 aa4.69□□□□□ -1.66
MRPS28-203ENST00000518371 THOC7Q6I9Y2 204 aaKnown RBP4.69□□□□□ -1.66
MRPS28-203ENST00000518371 ZNF343Q6P1L6 599 aa4.69□□□□□ -1.66
MRPS28-203ENST00000518371 C19orf35Q6ZS72 473 aa4.69□□□□□ -1.66
MRPS28-203ENST00000518371 SGPP2Q8IWX5 399 aa4.69□□□□□ -1.66
MRPS28-203ENST00000518371 GDPD1Q8N9F7 314 aa4.69□□□□□ -1.66
MRPS28-203ENST00000518371 OR10W1Q8NGF6 305 aa4.69□□□□□ -1.66
MRPS28-203ENST00000518371 OR5B3Q8NH48 314 aa4.69□□□□□ -1.66
MRPS28-203ENST00000518371 LSM10Q969L4 123 aaKnown RBP4.69□□□□□ -1.66
MRPS28-203ENST00000518371 OR4C12Q96R67 309 aa4.69□□□□□ -1.66
MRPS28-203ENST00000518371 PDCD10Q9BUL8 212 aa4.69□□□□□ -1.66
MRPS28-203ENST00000518371 ELOVL1Q9BW60 279 aa4.69□□□□□ -1.66
MRPS28-203ENST00000518371 SRRQ9GZT4 340 aa4.69□□□□□ -1.66
MRPS28-203ENST00000518371 TMEM222Q9H0R3 208 aa4.69□□□□□ -1.66
MRPS28-203ENST00000518371 C5orf66Q9H5L9 145 aa4.69□□□□□ -1.66
MRPS28-203ENST00000518371 NAA60Q9H7X0 242 aa4.69□□□□□ -1.66
MRPS28-203ENST00000518371 NDUFA4L2Q9NRX3 87 aa4.69□□□□□ -1.66
MRPS28-203ENST00000518371 SLC2A8Q9NY64 477 aa4.69□□□□□ -1.66
MRPS28-203ENST00000518371 THYN1Q9P016 225 aa4.69□□□□□ -1.66
MRPS28-203ENST00000518371 TNCP24821 2201 aa4.69□□□□□ -1.66
MRPS28-203ENST00000518371 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.68□□□□□ -1.66
MRPS28-203ENST00000518371 IGLC7A0M8Q6 106 aa4.68□□□□□ -1.66
MRPS28-203ENST00000518371 CRYM-AS1A6NIL9 109 aa4.68□□□□□ -1.66
MRPS28-203ENST00000518371 C15orf61A6NNL5 157 aa4.68□□□□□ -1.66
MRPS28-203ENST00000518371 CENPXA8MT69 81 aa4.68□□□□□ -1.66
MRPS28-203ENST00000518371 SAP30O75446 220 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms