RNA–Protein interactions for RNA: ENST00000513678.5

MATR3-222, Transcript of matrin 3, human

TSL 2

Gene MATR3, Length 444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-222	ENST00000513678	TMEM229B	Q8NBD8	167 aa		12.64	□□□□□ -0.39
MATR3-222	ENST00000513678	OR1P1	Q8NH06	330 aa		12.64	□□□□□ -0.39
MATR3-222	ENST00000513678	CACNG8	Q8WXS5	425 aa		12.64	□□□□□ -0.39
MATR3-222	ENST00000513678	BSCL2	Q96G97	398 aa	Predicted RBP	12.64	□□□□□ -0.39
MATR3-222	ENST00000513678	HIPK2	Q9H2X6	1198 aa		12.64	□□□□□ -0.39
MATR3-222	ENST00000513678	PLEC	Q15149	4684 aa	Known RBP	12.63	□□□□□ -0.39
MATR3-222	ENST00000513678	TRAV25	A0A0B4J276	109 aa		12.63	□□□□□ -0.39
MATR3-222	ENST00000513678	ZNF320	A2RRD8	509 aa		12.63	□□□□□ -0.39
MATR3-222	ENST00000513678	DBX1	A6NMT0	343 aa		12.63	□□□□□ -0.39
MATR3-222	ENST00000513678	GABARAP	H6UMI1	98 aa		12.63	□□□□□ -0.39
MATR3-222	ENST00000513678	SLC25A24	Q6NUK1	477 aa		12.63	□□□□□ -0.39
MATR3-222	ENST00000513678	UNQ9165/PRO28630	Q6UXU0	137 aa		12.63	□□□□□ -0.39
MATR3-222	ENST00000513678	H2BFWT	Q7Z2G1	175 aa		12.63	□□□□□ -0.39
MATR3-222	ENST00000513678	UXS1	Q8NBZ7	420 aa		12.63	□□□□□ -0.39
MATR3-222	ENST00000513678	ZNF114	Q8NC26	417 aa		12.63	□□□□□ -0.39
MATR3-222	ENST00000513678	RAB2B	Q8WUD1	216 aa		12.63	□□□□□ -0.39
MATR3-222	ENST00000513678	WDR89	Q96FK6	387 aa	Predicted RBP	12.63	□□□□□ -0.39
MATR3-222	ENST00000513678	HINT2	Q9BX68	163 aa		12.63	□□□□□ -0.39
MATR3-222	ENST00000513678	WFDC10A	Q9H1F0	79 aa		12.63	□□□□□ -0.39
MATR3-222	ENST00000513678	MRPL27	Q9P0M9	148 aa	Known RBP	12.63	□□□□□ -0.39
MATR3-222	ENST00000513678	RABL2A	Q9UBK7	228 aa	Predicted RBP	12.63	□□□□□ -0.39
MATR3-222	ENST00000513678	RABL2B	Q9UNT1	228 aa		12.63	□□□□□ -0.39
MATR3-222	ENST00000513678	UFC1	Q9Y3C8	167 aa		12.63	□□□□□ -0.39
MATR3-222	ENST00000513678	LCE6A	A0A183	80 aa		12.62	□□□□□ -0.39
MATR3-222	ENST00000513678		K7EIM0	57 aa		12.62	□□□□□ -0.39
MATR3-222	ENST00000513678	FCGR2B	P31994	310 aa	Predicted RBP	12.62	□□□□□ -0.39
MATR3-222	ENST00000513678	TMBIM6	P55061	237 aa		12.62	□□□□□ -0.39
MATR3-222	ENST00000513678	TAS2R19	P59542	299 aa		12.62	□□□□□ -0.39
MATR3-222	ENST00000513678	PRCD	Q00LT1	54 aa		12.62	□□□□□ -0.39
MATR3-222	ENST00000513678	SPCS2	Q15005	226 aa		12.62	□□□□□ -0.39
MATR3-222	ENST00000513678	ZNF57	Q68EA5	555 aa	Predicted RBP	12.62	□□□□□ -0.39
MATR3-222	ENST00000513678	ZFAND6	Q6FIF0	208 aa		12.62	□□□□□ -0.39
MATR3-222	ENST00000513678	TMEM61	Q8N0U2	210 aa		12.62	□□□□□ -0.39
MATR3-222	ENST00000513678	OR2C3	Q8N628	320 aa		12.62	□□□□□ -0.39
MATR3-222	ENST00000513678	DEFB125	Q8N687	156 aa		12.62	□□□□□ -0.39
MATR3-222	ENST00000513678	OR4A16	Q8NH70	328 aa		12.62	□□□□□ -0.39
MATR3-222	ENST00000513678	TERB2	Q8NHR7	220 aa		12.62	□□□□□ -0.39
MATR3-222	ENST00000513678	SCARB1	Q8WTV0	552 aa		12.62	□□□□□ -0.39
MATR3-222	ENST00000513678	TMEM190	Q8WZ59	177 aa		12.62	□□□□□ -0.39
MATR3-222	ENST00000513678	RETN	Q9HD89	108 aa		12.62	□□□□□ -0.39
MATR3-222	ENST00000513678	C21orf62	Q9NYP8	219 aa		12.62	□□□□□ -0.39
MATR3-222	ENST00000513678	MLX	Q9UH92	298 aa		12.62	□□□□□ -0.39
MATR3-222	ENST00000513678	RBMY1B	A6NDE4	496 aa	Known RBP	12.61	□□□□□ -0.39
MATR3-222	ENST00000513678	RBMY1E	A6NEQ0	496 aa	Known RBP	12.61	□□□□□ -0.39
MATR3-222	ENST00000513678		F8W735	103 aa	Predicted RBP	12.61	□□□□□ -0.39
MATR3-222	ENST00000513678	INS-IGF2	F8WCM5	200 aa		12.61	□□□□□ -0.39
MATR3-222	ENST00000513678	CTDSPL	O15194	276 aa		12.61	□□□□□ -0.39
MATR3-222	ENST00000513678	B3GALNT1	O75752	331 aa		12.61	□□□□□ -0.39
MATR3-222	ENST00000513678	RBMY1D	P0C7P1	496 aa	Known RBP	12.61	□□□□□ -0.39
MATR3-222	ENST00000513678		P0C879	139 aa		12.61	□□□□□ -0.39
MATR3-222	ENST00000513678	PIGP	P57054	158 aa		12.61	□□□□□ -0.39
MATR3-222	ENST00000513678	HSPE1	P61604	102 aa	Known RBP	12.61	□□□□□ -0.39
MATR3-222	ENST00000513678	GUCA2B	Q16661	112 aa		12.61	□□□□□ -0.39
MATR3-222	ENST00000513678	ZFAND1	Q8TCF1	268 aa		12.61	□□□□□ -0.39
MATR3-222	ENST00000513678	MRGPRF	Q96AM1	343 aa		12.61	□□□□□ -0.39
MATR3-222	ENST00000513678	SRD5A3	Q9H8P0	318 aa		12.61	□□□□□ -0.39
MATR3-222	ENST00000513678	GAR1	Q9NY12	217 aa	Known RBP	12.61	□□□□□ -0.39
MATR3-222	ENST00000513678	CCDC59	Q9P031	241 aa	Known RBP	12.61	□□□□□ -0.39
MATR3-222	ENST00000513678	OR11H12	B2RN74	326 aa		12.6	□□□□□ -0.39
MATR3-222	ENST00000513678	NDUFA4	O00483	81 aa		12.6	□□□□□ -0.39
MATR3-222	ENST00000513678	CTDSP2	O14595	271 aa		12.6	□□□□□ -0.39
MATR3-222	ENST00000513678	ATG12	O94817	140 aa		12.6	□□□□□ -0.39
MATR3-222	ENST00000513678	RAB3D	O95716	219 aa		12.6	□□□□□ -0.39
MATR3-222	ENST00000513678	PGAM2	P15259	253 aa		12.6	□□□□□ -0.39
MATR3-222	ENST00000513678	MEF2D	Q14814	521 aa		12.6	□□□□□ -0.39
MATR3-222	ENST00000513678	TM4SF20	Q53R12	229 aa		12.6	□□□□□ -0.39
MATR3-222	ENST00000513678	RNASE12	Q5GAN4	147 aa	Known RBP	12.6	□□□□□ -0.39
MATR3-222	ENST00000513678	STEAP1B	Q6NZ63	245 aa		12.6	□□□□□ -0.39
MATR3-222	ENST00000513678	SLC16A13	Q7RTY0	426 aa		12.6	□□□□□ -0.39
MATR3-222	ENST00000513678	CLVS1	Q8IUQ0	354 aa	Predicted RBP	12.6	□□□□□ -0.39
MATR3-222	ENST00000513678	DYNC2LI1	Q8TCX1	351 aa		12.6	□□□□□ -0.39
MATR3-222	ENST00000513678	SMIM4	Q8WVI0	70 aa		12.6	□□□□□ -0.39
MATR3-222	ENST00000513678	DAZ1	Q9NQZ3	744 aa	Known RBP	12.6	□□□□□ -0.39
MATR3-222	ENST00000513678	C3orf85	A0A1B0GTC6	90 aa		12.59	□□□□□ -0.39
MATR3-222	ENST00000513678	OR2T8	A6NH00	312 aa		12.59	□□□□□ -0.39
MATR3-222	ENST00000513678		K7EMT4	169 aa		12.59	□□□□□ -0.39
MATR3-222	ENST00000513678	RGS5	O15539	181 aa		12.59	□□□□□ -0.39
MATR3-222	ENST00000513678	IGKV1-5	P01602	117 aa		12.59	□□□□□ -0.39
MATR3-222	ENST00000513678	ADM	P35318	185 aa		12.59	□□□□□ -0.39
MATR3-222	ENST00000513678	ANKRD55	Q3KP44	614 aa		12.59	□□□□□ -0.39
MATR3-222	ENST00000513678	CCDC71L	Q8N9Z2	235 aa		12.59	□□□□□ -0.39
MATR3-222	ENST00000513678	OR4D10	Q8NGI6	311 aa		12.59	□□□□□ -0.39
MATR3-222	ENST00000513678	TP53RK	Q96S44	253 aa		12.59	□□□□□ -0.39
MATR3-222	ENST00000513678	TXN2	Q99757	166 aa		12.59	□□□□□ -0.39
MATR3-222	ENST00000513678	C5orf66	Q9H5L9	145 aa		12.59	□□□□□ -0.39
MATR3-222	ENST00000513678		I3L2K1	104 aa		12.58	□□□□□ -0.4
MATR3-222	ENST00000513678	CTSD	P07339	412 aa	Predicted RBP	12.58	□□□□□ -0.4
MATR3-222	ENST00000513678	CTSG	P08311	255 aa		12.58	□□□□□ -0.4
MATR3-222	ENST00000513678	PI3	P19957	117 aa		12.58	□□□□□ -0.4
MATR3-222	ENST00000513678	UCP1	P25874	307 aa		12.58	□□□□□ -0.4
MATR3-222	ENST00000513678	SURF2	Q15527	256 aa	Predicted RBP	12.58	□□□□□ -0.4
MATR3-222	ENST00000513678	BTNL8	Q6UX41	500 aa		12.58	□□□□□ -0.4
MATR3-222	ENST00000513678	OR13C8	Q8NGS7	320 aa		12.58	□□□□□ -0.4
MATR3-222	ENST00000513678	FAM110A	Q9BQ89	295 aa		12.58	□□□□□ -0.4
MATR3-222	ENST00000513678	CHRDL1	Q9BU40	450 aa		12.58	□□□□□ -0.4
MATR3-222	ENST00000513678	COPZ2	Q9P299	210 aa		12.58	□□□□□ -0.4
MATR3-222	ENST00000513678	SELENOK	Q9Y6D0	94 aa		12.58	□□□□□ -0.4
MATR3-222	ENST00000513678	EPPK1	P58107	5090 aa	Known RBP	12.57	□□□□□ -0.4
MATR3-222	ENST00000513678		A0A0B4J293	547 aa		12.57	□□□□□ -0.4
MATR3-222	ENST00000513678	RPL5	P46777	297 aa	Known RBP	12.57	□□□□□ -0.4

Retrieved 100 of 20,778 RNA–protein pairs in 57 ms