RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 LHFPL5Q8TAF8 219 aa7.38□□□□□ -1.23
RNF4-221ENST00000513643 CXorf58Q96LI9 332 aa7.38□□□□□ -1.23
RNF4-221ENST00000513643 TMEM56Q96MV1 263 aa7.38□□□□□ -1.23
RNF4-221ENST00000513643 B9D2Q9BPU9 175 aa7.38□□□□□ -1.23
RNF4-221ENST00000513643 SRRQ9GZT4 340 aa7.38□□□□□ -1.23
RNF4-221ENST00000513643 NAA60Q9H7X0 242 aa7.38□□□□□ -1.23
RNF4-221ENST00000513643 NDUFA13Q9P0J0 144 aa7.38□□□□□ -1.23
RNF4-221ENST00000513643 COPZ2Q9P299 210 aa7.38□□□□□ -1.23
RNF4-221ENST00000513643 TMEM56-RWDD3S4R434 201 aa7.38□□□□□ -1.23
RNF4-221ENST00000513643 GGCTO75223 188 aaKnown RBP7.37□□□□□ -1.23
RNF4-221ENST00000513643 OR2C1O95371 312 aa7.37□□□□□ -1.23
RNF4-221ENST00000513643 HLA-AP01891 365 aaKnown RBP7.37□□□□□ -1.23
RNF4-221ENST00000513643 CLEC3BP05452 202 aa7.37□□□□□ -1.23
RNF4-221ENST00000513643 OR5AC1P0C628 307 aa7.37□□□□□ -1.23
RNF4-221ENST00000513643 FCGR2BP31994 310 aaPredicted RBP7.37□□□□□ -1.23
RNF4-221ENST00000513643 SUPT4H1P63272 117 aaKnown RBP7.37□□□□□ -1.23
RNF4-221ENST00000513643 DCTN2Q13561 401 aaKnown RBP7.37□□□□□ -1.23
RNF4-221ENST00000513643 IZUMO4Q1ZYL8 232 aa7.37□□□□□ -1.23
RNF4-221ENST00000513643 RPEL1Q2QD12 228 aa7.37□□□□□ -1.23
RNF4-221ENST00000513643 BSXQ3C1V8 233 aa7.37□□□□□ -1.23
RNF4-221ENST00000513643 SELENOHQ8IZQ5 122 aaKnown RBP7.37□□□□□ -1.23
RNF4-221ENST00000513643 Q8N402 240 aa7.37□□□□□ -1.23
RNF4-221ENST00000513643 OR1L6Q8NGR2 347 aa7.37□□□□□ -1.23
RNF4-221ENST00000513643 EEF1AKMT3Q96AZ1 226 aa7.37□□□□□ -1.23
RNF4-221ENST00000513643 OR4C12Q96R67 309 aa7.37□□□□□ -1.23
RNF4-221ENST00000513643 PRR25Q96S07 402 aa7.37□□□□□ -1.23
RNF4-221ENST00000513643 SDHCQ99643 169 aaPredicted RBP7.37□□□□□ -1.23
RNF4-221ENST00000513643 ELOVL1Q9BW60 279 aa7.37□□□□□ -1.23
RNF4-221ENST00000513643 THYN1Q9P016 225 aa7.37□□□□□ -1.23
RNF4-221ENST00000513643 NBEAL2Q6ZNJ1 2754 aa7.36□□□□□ -1.23
RNF4-221ENST00000513643 CCDC160A6NGH7 325 aa7.36□□□□□ -1.23
RNF4-221ENST00000513643 A8MWP6 167 aa7.36□□□□□ -1.23
RNF4-221ENST00000513643 A8MZ25 164 aa7.36□□□□□ -1.23
RNF4-221ENST00000513643 PPP5D1E7EU14 171 aa7.36□□□□□ -1.23
RNF4-221ENST00000513643 I3L2K1 104 aa7.36□□□□□ -1.23
RNF4-221ENST00000513643 ATG12O94817 140 aa7.36□□□□□ -1.23
RNF4-221ENST00000513643 C8orf88P0DMB2 117 aa7.36□□□□□ -1.23
RNF4-221ENST00000513643 DEFA4P12838 97 aa7.36□□□□□ -1.23
RNF4-221ENST00000513643 GP9P14770 177 aa7.36□□□□□ -1.23
RNF4-221ENST00000513643 DHODHQ02127 395 aa7.36□□□□□ -1.23
RNF4-221ENST00000513643 TMEM187Q14656 261 aa7.36□□□□□ -1.23
RNF4-221ENST00000513643 TATDN3Q17R31 274 aa7.36□□□□□ -1.23
RNF4-221ENST00000513643 CLEC19AQ6UXS0 136 aa7.36□□□□□ -1.23
RNF4-221ENST00000513643 FAM219AQ8IW50 185 aa7.36□□□□□ -1.23
RNF4-221ENST00000513643 OR52E5Q8NH55 327 aa7.36□□□□□ -1.23
RNF4-221ENST00000513643 OR4A16Q8NH70 328 aa7.36□□□□□ -1.23
RNF4-221ENST00000513643 SCARB1Q8WTV0 552 aa7.36□□□□□ -1.23
RNF4-221ENST00000513643 IL22RA2Q969J5 263 aa7.36□□□□□ -1.23
RNF4-221ENST00000513643 ZNF436Q9C0F3 470 aaPredicted RBP7.36□□□□□ -1.23
RNF4-221ENST00000513643 SCP2D1Q9UJQ7 156 aa7.36□□□□□ -1.23
RNF4-221ENST00000513643 KMT2CQ8NEZ4 4911 aaKnown RBP7.36□□□□□ -1.23
RNF4-221ENST00000513643 TMEM213A2RRL7 107 aa7.35□□□□□ -1.23
RNF4-221ENST00000513643 C2orf70A6NJV1 201 aa7.35□□□□□ -1.23
RNF4-221ENST00000513643 ST8SIA3O43173 380 aa7.35□□□□□ -1.23
RNF4-221ENST00000513643 IGHV3-23P01764 117 aa7.35□□□□□ -1.23
RNF4-221ENST00000513643 S100A5P33763 92 aa7.35□□□□□ -1.23
RNF4-221ENST00000513643 ADMP35318 185 aa7.35□□□□□ -1.23
RNF4-221ENST00000513643 ARL3P36405 182 aa7.35□□□□□ -1.23
RNF4-221ENST00000513643 BAK1Q16611 211 aa7.35□□□□□ -1.23
RNF4-221ENST00000513643 PYDC2Q56P42 97 aa7.35□□□□□ -1.23
RNF4-221ENST00000513643 DEFB121Q5J5C9 76 aa7.35□□□□□ -1.23
RNF4-221ENST00000513643 HAPLN4Q86UW8 402 aa7.35□□□□□ -1.23
RNF4-221ENST00000513643 OR2K2Q8NGT1 345 aa7.35□□□□□ -1.23
RNF4-221ENST00000513643 RBPMSQ93062 196 aaKnown RBP7.35□□□□□ -1.23
RNF4-221ENST00000513643 SCGB3A2Q96PL1 93 aa7.35□□□□□ -1.23
RNF4-221ENST00000513643 ZC4H2Q9NQZ6 224 aa7.35□□□□□ -1.23
RNF4-221ENST00000513643 PEMTQ9UBM1 199 aa7.35□□□□□ -1.23
RNF4-221ENST00000513643 C14orf166Q9Y224 244 aaKnown RBP7.35□□□□□ -1.23
RNF4-221ENST00000513643 S4R3C0 116 aa7.35□□□□□ -1.23
RNF4-221ENST00000513643 IZUMO1RA6ND01 250 aa7.34□□□□□ -1.23
RNF4-221ENST00000513643 ZNF785A8K8V0 405 aa7.34□□□□□ -1.23
RNF4-221ENST00000513643 CTSGP08311 255 aa7.34□□□□□ -1.23
RNF4-221ENST00000513643 EDN2P20800 178 aa7.34□□□□□ -1.23
RNF4-221ENST00000513643 CBLN1P23435 193 aa7.34□□□□□ -1.23
RNF4-221ENST00000513643 ELLP55199 621 aaPredicted RBP7.34□□□□□ -1.23
RNF4-221ENST00000513643 AP3S2P59780 193 aa7.34□□□□□ -1.23
RNF4-221ENST00000513643 TRIM16LQ309B1 348 aa7.34□□□□□ -1.23
RNF4-221ENST00000513643 DEFB114Q30KQ6 69 aa7.34□□□□□ -1.23
RNF4-221ENST00000513643 NMSQ5H8A3 153 aa7.34□□□□□ -1.23
RNF4-221ENST00000513643 SLC25A24Q6NUK1 477 aa7.34□□□□□ -1.23
RNF4-221ENST00000513643 UNQ9165/PRO28630Q6UXU0 137 aa7.34□□□□□ -1.23
RNF4-221ENST00000513643 TOMM5Q8N4H5 51 aa7.34□□□□□ -1.23
RNF4-221ENST00000513643 GPR146Q96CH1 333 aa7.34□□□□□ -1.23
RNF4-221ENST00000513643 BSCL2Q96G97 398 aaPredicted RBP7.34□□□□□ -1.23
RNF4-221ENST00000513643 SLC25A21Q9BQT8 299 aaPredicted RBP7.34□□□□□ -1.23
RNF4-221ENST00000513643 HINT2Q9BX68 163 aa7.34□□□□□ -1.23
RNF4-221ENST00000513643 C19orf73Q9NVV2 129 aa7.34□□□□□ -1.23
RNF4-221ENST00000513643 C21orf62Q9NYP8 219 aa7.34□□□□□ -1.23
RNF4-221ENST00000513643 A0A0B4J2A0 478 aa7.33□□□□□ -1.24
RNF4-221ENST00000513643 CYB5BO43169 146 aa7.33□□□□□ -1.24
RNF4-221ENST00000513643 TGOLN2O43493 480 aa7.33□□□□□ -1.24
RNF4-221ENST00000513643 NHLRC4P0CG21 123 aaPredicted RBP7.33□□□□□ -1.24
RNF4-221ENST00000513643 RNASE2P10153 161 aaKnown RBP7.33□□□□□ -1.24
RNF4-221ENST00000513643 FOLR2P14207 255 aa7.33□□□□□ -1.24
RNF4-221ENST00000513643 GPR183P32249 361 aa7.33□□□□□ -1.24
RNF4-221ENST00000513643 FAUP35544 74 aaKnown RBP7.33□□□□□ -1.24
RNF4-221ENST00000513643 SPCS3P61009 180 aa7.33□□□□□ -1.24
RNF4-221ENST00000513643 FAM106AQ4KMX7 169 aa7.33□□□□□ -1.24
RNF4-221ENST00000513643 SPANXN2Q5MJ10 180 aa7.33□□□□□ -1.24
RNF4-221ENST00000513643 SPSB3Q6PJ21 355 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms