RNA–Protein interactions for RNA: ENST00000513600.5

TRAPPC11-210, Transcript of trafficking protein particle complex 11, humanhuman

TSL 3

Gene TRAPPC11, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-210ENST00000513600 ZNF345Q14585 488 aa0.64□□□□□ -2.31
TRAPPC11-210ENST00000513600 IMPG1Q17R60 797 aa0.64□□□□□ -2.31
TRAPPC11-210ENST00000513600 CCDC122Q5T0U0 273 aa0.64□□□□□ -2.31
TRAPPC11-210ENST00000513600 C1orf158Q8N1D5 194 aa0.64□□□□□ -2.31
TRAPPC11-210ENST00000513600 OR51I1Q9H343 314 aa0.64□□□□□ -2.31
TRAPPC11-210ENST00000513600 FAM96AQ9H5X1 160 aa0.64□□□□□ -2.31
TRAPPC11-210ENST00000513600 XPNPEP1Q9NQW7 623 aa0.64□□□□□ -2.31
TRAPPC11-210ENST00000513600 GUCA1BQ9UMX6 200 aa0.64□□□□□ -2.31
TRAPPC11-210ENST00000513600 LSM5Q9Y4Y9 91 aaKnown RBP0.64□□□□□ -2.31
TRAPPC11-210ENST00000513600 ADCY9O60503 1353 aa0.64□□□□□ -2.31
TRAPPC11-210ENST00000513600 LAMB4A4D0S4 1761 aa0.64□□□□□ -2.31
TRAPPC11-210ENST00000513600 EVC2Q86UK5 1308 aa0.64□□□□□ -2.31
TRAPPC11-210ENST00000513600 HEATR5BQ9P2D3 2071 aa0.63□□□□□ -2.31
TRAPPC11-210ENST00000513600 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.63□□□□□ -2.31
TRAPPC11-210ENST00000513600 I3L521 148 aa0.63□□□□□ -2.31
TRAPPC11-210ENST00000513600 C1QAP02745 245 aa0.63□□□□□ -2.31
TRAPPC11-210ENST00000513600 SRP19P09132 144 aaKnown RBP0.63□□□□□ -2.31
TRAPPC11-210ENST00000513600 METTL15P1P0C7V9 234 aa0.63□□□□□ -2.31
TRAPPC11-210ENST00000513600 HIST1H1EP10412 219 aaKnown RBP0.63□□□□□ -2.31
TRAPPC11-210ENST00000513600 FGF6P10767 208 aa0.63□□□□□ -2.31
TRAPPC11-210ENST00000513600 RNASE3P12724 160 aaKnown RBP0.63□□□□□ -2.31
TRAPPC11-210ENST00000513600 HLA-DMBP28068 263 aa0.63□□□□□ -2.31
TRAPPC11-210ENST00000513600 MAP2K4P45985 399 aa0.63□□□□□ -2.31
TRAPPC11-210ENST00000513600 EIF2B2P49770 351 aaKnown RBP0.63□□□□□ -2.31
TRAPPC11-210ENST00000513600 TCL1AP56279 114 aa0.63□□□□□ -2.31
TRAPPC11-210ENST00000513600 OR2F1Q13607 317 aa0.63□□□□□ -2.31
TRAPPC11-210ENST00000513600 PMAIP1Q13794 54 aa0.63□□□□□ -2.31
TRAPPC11-210ENST00000513600 RGS21Q2M5E4 152 aa0.63□□□□□ -2.31
TRAPPC11-210ENST00000513600 GLT8D1Q68CQ7 371 aa0.63□□□□□ -2.31
TRAPPC11-210ENST00000513600 MNS1Q8NEH6 495 aa0.63□□□□□ -2.31
TRAPPC11-210ENST00000513600 OR1M1Q8NGA1 313 aa0.63□□□□□ -2.31
TRAPPC11-210ENST00000513600 SLC35B4Q969S0 331 aa0.63□□□□□ -2.31
TRAPPC11-210ENST00000513600 IMP4Q96G21 291 aaKnown RBP0.63□□□□□ -2.31
TRAPPC11-210ENST00000513600 CNBD2Q96M20 576 aa0.63□□□□□ -2.31
TRAPPC11-210ENST00000513600 SMARCA4P51532 1647 aa0.63□□□□□ -2.31
TRAPPC11-210ENST00000513600 GLI3P10071 1580 aa0.62□□□□□ -2.31
TRAPPC11-210ENST00000513600 PTPRSQ13332 1948 aa0.62□□□□□ -2.31
TRAPPC11-210ENST00000513600 A0A087WX48 190 aa0.62□□□□□ -2.31
TRAPPC11-210ENST00000513600 INMT-MINDY4F8WBC2 141 aa0.62□□□□□ -2.31
TRAPPC11-210ENST00000513600 NOS1APO75052 506 aaPredicted RBP0.62□□□□□ -2.31
TRAPPC11-210ENST00000513600 IFNA16P05015 189 aa0.62□□□□□ -2.31
TRAPPC11-210ENST00000513600 SULT1A1P50225 295 aa0.62□□□□□ -2.31
TRAPPC11-210ENST00000513600 OR4D2P58180 307 aa0.62□□□□□ -2.31
TRAPPC11-210ENST00000513600 SYPL2Q5VXT5 272 aa0.62□□□□□ -2.31
TRAPPC11-210ENST00000513600 ALKAL1Q6UXT8 129 aa0.62□□□□□ -2.31
TRAPPC11-210ENST00000513600 TMEM86BQ8N661 226 aa0.62□□□□□ -2.31
TRAPPC11-210ENST00000513600 OR8J2Q8NGG1 315 aa0.62□□□□□ -2.31
TRAPPC11-210ENST00000513600 ANKRD7Q92527 254 aa0.62□□□□□ -2.31
TRAPPC11-210ENST00000513600 OR52E6Q96RD3 313 aa0.62□□□□□ -2.31
TRAPPC11-210ENST00000513600 PARD6GQ9BYG4 376 aaPredicted RBP0.62□□□□□ -2.31
TRAPPC11-210ENST00000513600 GREB1Q4ZG55 1949 aa0.62□□□□□ -2.31
TRAPPC11-210ENST00000513600 MYO3BQ8WXR4 1341 aa0.62□□□□□ -2.31
TRAPPC11-210ENST00000513600 SNAPC4Q5SXM2 1469 aa0.61□□□□□ -2.31
TRAPPC11-210ENST00000513600 PLB1Q6P1J6 1458 aa0.61□□□□□ -2.31
TRAPPC11-210ENST00000513600 TRBV20OR9-2A0A075B6H5 130 aa0.61□□□□□ -2.31
TRAPPC11-210ENST00000513600 GGT3PA6NGU5 568 aa0.61□□□□□ -2.31
TRAPPC11-210ENST00000513600 EEF1E1-BLOC1S5C9J1V9 151 aa0.61□□□□□ -2.31
TRAPPC11-210ENST00000513600 IGHV3-7P01780 117 aa0.61□□□□□ -2.31
TRAPPC11-210ENST00000513600 SERPINA6P08185 405 aa0.61□□□□□ -2.31
TRAPPC11-210ENST00000513600 NFYAP23511 347 aaPredicted RBP0.61□□□□□ -2.31
TRAPPC11-210ENST00000513600 CEBPGP53567 150 aa0.61□□□□□ -2.31
TRAPPC11-210ENST00000513600 FXYD2P54710 66 aa0.61□□□□□ -2.31
TRAPPC11-210ENST00000513600 SPCS3P61009 180 aa0.61□□□□□ -2.31
TRAPPC11-210ENST00000513600 PSME3P61289 254 aa0.61□□□□□ -2.31
TRAPPC11-210ENST00000513600 CCL20P78556 96 aa0.61□□□□□ -2.31
TRAPPC11-210ENST00000513600 IFITM2Q01629 132 aa0.61□□□□□ -2.31
TRAPPC11-210ENST00000513600 RPL18Q07020 188 aaKnown RBP0.61□□□□□ -2.31
TRAPPC11-210ENST00000513600 GRK1Q15835 563 aa0.61□□□□□ -2.31
TRAPPC11-210ENST00000513600 GUK1Q16774 197 aa0.61□□□□□ -2.31
TRAPPC11-210ENST00000513600 IBA57Q5T440 356 aaKnown RBP0.61□□□□□ -2.31
TRAPPC11-210ENST00000513600 HIST2H3PS2Q5TEC6 136 aa0.61□□□□□ -2.31
TRAPPC11-210ENST00000513600 C8orf74Q6P047 294 aa0.61□□□□□ -2.31
TRAPPC11-210ENST00000513600 C20orf196Q8IYI0 205 aa0.61□□□□□ -2.31
TRAPPC11-210ENST00000513600 LRRC25Q8N386 305 aaPredicted RBP0.61□□□□□ -2.31
TRAPPC11-210ENST00000513600 OR4C6Q8NH72 309 aa0.61□□□□□ -2.31
TRAPPC11-210ENST00000513600 OBSCN-AS1Q96MR7 158 aa0.61□□□□□ -2.31
TRAPPC11-210ENST00000513600 OR8D2Q9GZM6 311 aa0.61□□□□□ -2.31
TRAPPC11-210ENST00000513600 EFCAB1Q9HAE3 211 aa0.61□□□□□ -2.31
TRAPPC11-210ENST00000513600 CISHQ9NSE2 258 aa0.61□□□□□ -2.31
TRAPPC11-210ENST00000513600 PAQR5Q9NXK6 330 aaPredicted RBP0.61□□□□□ -2.31
TRAPPC11-210ENST00000513600 VPS29Q9UBQ0 182 aa0.61□□□□□ -2.31
TRAPPC11-210ENST00000513600 FUT9Q9Y231 359 aa0.61□□□□□ -2.31
TRAPPC11-210ENST00000513600 DOCK3Q8IZD9 2030 aa0.6□□□□□ -2.31
TRAPPC11-210ENST00000513600 TGIF2-C20orf24A0A0A6YYL0 155 aa0.6□□□□□ -2.31
TRAPPC11-210ENST00000513600 A0A0J9YY10 115 aa0.6□□□□□ -2.31
TRAPPC11-210ENST00000513600 A0A1B0GX78 115 aa0.6□□□□□ -2.31
TRAPPC11-210ENST00000513600 FABP5P3A8MUU1 101 aa0.6□□□□□ -2.31
TRAPPC11-210ENST00000513600 GOLGA6L19H0YKK7 550 aa0.6□□□□□ -2.31
TRAPPC11-210ENST00000513600 PSMD12O00232 456 aaPredicted RBP0.6□□□□□ -2.31
TRAPPC11-210ENST00000513600 KPNA3O00505 521 aaPredicted RBP0.6□□□□□ -2.31
TRAPPC11-210ENST00000513600 CHP2O43745 196 aa0.6□□□□□ -2.31
TRAPPC11-210ENST00000513600 E2F6O75461 281 aa0.6□□□□□ -2.31
TRAPPC11-210ENST00000513600 TNNC2P02585 160 aa0.6□□□□□ -2.31
TRAPPC11-210ENST00000513600 SHBGP04278 402 aa0.6□□□□□ -2.31
TRAPPC11-210ENST00000513600 PRM2P04554 102 aa0.6□□□□□ -2.31
TRAPPC11-210ENST00000513600 CD79AP11912 226 aa0.6□□□□□ -2.31
TRAPPC11-210ENST00000513600 HIST1H1TP22492 207 aaPredicted RBP0.6□□□□□ -2.31
TRAPPC11-210ENST00000513600 OMPP47874 163 aa0.6□□□□□ -2.31
TRAPPC11-210ENST00000513600 ZNF80P51504 273 aaPredicted RBP0.6□□□□□ -2.31
TRAPPC11-210ENST00000513600 ITGB3BPQ13352 177 aaPredicted RBP0.6□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms