RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 RPP14O95059 124 aaKnown RBP1.05□□□□□ -2.24
CHD1-207ENST00000511628 CLPSP04118 112 aa1.05□□□□□ -2.24
CHD1-207ENST00000511628 ARL14EPLP0DKL9 152 aa1.05□□□□□ -2.24
CHD1-207ENST00000511628 RPS4Y1P22090 263 aaKnown RBP1.05□□□□□ -2.24
CHD1-207ENST00000511628 HIST1H4AP62805 103 aaKnown RBP1.05□□□□□ -2.24
CHD1-207ENST00000511628 RGS21Q2M5E4 152 aa1.05□□□□□ -2.24
CHD1-207ENST00000511628 ANKRD29Q8N6D5 301 aa1.05□□□□□ -2.24
CHD1-207ENST00000511628 ZNF439Q8NDP4 499 aa1.05□□□□□ -2.24
CHD1-207ENST00000511628 ZNF563Q8TA94 476 aa1.05□□□□□ -2.24
CHD1-207ENST00000511628 MRPL30Q8TCC3 161 aaKnown RBP1.05□□□□□ -2.24
CHD1-207ENST00000511628 OR52E6Q96RD3 313 aa1.05□□□□□ -2.24
CHD1-207ENST00000511628 C8orf4Q9NR00 106 aa1.05□□□□□ -2.24
CHD1-207ENST00000511628 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.05□□□□□ -2.24
CHD1-207ENST00000511628 DOK5Q9P104 306 aa1.05□□□□□ -2.24
CHD1-207ENST00000511628 ZFHX2Q9C0A1 2572 aaPredicted RBP1.04□□□□□ -2.24
CHD1-207ENST00000511628 BAZ2BQ9UIF8 2168 aaKnown RBP1.04□□□□□ -2.24
CHD1-207ENST00000511628 PRRC2BQ5JSZ5 2229 aaKnown RBP1.04□□□□□ -2.24
CHD1-207ENST00000511628 TRBV10-2A0A0K0K1G8 114 aa1.04□□□□□ -2.24
CHD1-207ENST00000511628 OR4C46A6NHA9 309 aa1.04□□□□□ -2.24
CHD1-207ENST00000511628 SLC22A1O15245 554 aa1.04□□□□□ -2.24
CHD1-207ENST00000511628 E2F6O75461 281 aa1.04□□□□□ -2.24
CHD1-207ENST00000511628 CNIH1O95406 144 aa1.04□□□□□ -2.24
CHD1-207ENST00000511628 C1QAP02745 245 aa1.04□□□□□ -2.24
CHD1-207ENST00000511628 SHBGP04278 402 aa1.04□□□□□ -2.24
CHD1-207ENST00000511628 EIF2B2P49770 351 aaKnown RBP1.04□□□□□ -2.24
CHD1-207ENST00000511628 PSME3P61289 254 aa1.04□□□□□ -2.24
CHD1-207ENST00000511628 HBA1P69905 142 aa1.04□□□□□ -2.24
CHD1-207ENST00000511628 Q1T7F1 81 aa1.04□□□□□ -2.24
CHD1-207ENST00000511628 ARHGAP11BQ3KRB8 267 aa1.04□□□□□ -2.24
CHD1-207ENST00000511628 IBA57Q5T440 356 aaKnown RBP1.04□□□□□ -2.24
CHD1-207ENST00000511628 C20orf196Q8IYI0 205 aa1.04□□□□□ -2.24
CHD1-207ENST00000511628 LRRC25Q8N386 305 aaPredicted RBP1.04□□□□□ -2.24
CHD1-207ENST00000511628 PRAP1Q96NZ9 151 aa1.04□□□□□ -2.24
CHD1-207ENST00000511628 TSPAN32Q96QS1 320 aa1.04□□□□□ -2.24
CHD1-207ENST00000511628 NIPSNAP1Q9BPW8 284 aa1.04□□□□□ -2.24
CHD1-207ENST00000511628 MRPL32Q9BYC8 188 aaKnown RBP1.04□□□□□ -2.24
CHD1-207ENST00000511628 OR51V1Q9H2C8 321 aa1.04□□□□□ -2.24
CHD1-207ENST00000511628 BAIAP2Q9UQB8 552 aa1.04□□□□□ -2.24
CHD1-207ENST00000511628 FREM1Q5H8C1 2179 aa1.04□□□□□ -2.24
CHD1-207ENST00000511628 SMARCA4P51532 1647 aa1.04□□□□□ -2.24
CHD1-207ENST00000511628 STRCQ7RTU9 1775 aa1.03□□□□□ -2.24
CHD1-207ENST00000511628 KIF13BQ9NQT8 1826 aa1.03□□□□□ -2.24
CHD1-207ENST00000511628 TRAV26-2A0A0B4J265 109 aa1.03□□□□□ -2.24
CHD1-207ENST00000511628 CRPP02741 224 aa1.03□□□□□ -2.24
CHD1-207ENST00000511628 TTRP02766 147 aa1.03□□□□□ -2.24
CHD1-207ENST00000511628 HIST1H2BOP23527 126 aa1.03□□□□□ -2.24
CHD1-207ENST00000511628 HIST1H2BBP33778 126 aa1.03□□□□□ -2.24
CHD1-207ENST00000511628 OMPP47874 163 aa1.03□□□□□ -2.24
CHD1-207ENST00000511628 ZNF80P51504 273 aaPredicted RBP1.03□□□□□ -2.24
CHD1-207ENST00000511628 CEBPGP53567 150 aa1.03□□□□□ -2.24
CHD1-207ENST00000511628 HIST1H2BDP58876 126 aa1.03□□□□□ -2.24
CHD1-207ENST00000511628 HIST1H2BCP62807 126 aa1.03□□□□□ -2.24
CHD1-207ENST00000511628 HIST2H2BEQ16778 126 aa1.03□□□□□ -2.24
CHD1-207ENST00000511628 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.03□□□□□ -2.24
CHD1-207ENST00000511628 FP248Q71RG6 208 aaPredicted RBP1.03□□□□□ -2.24
CHD1-207ENST00000511628 TMEM86AQ8N2M4 240 aa1.03□□□□□ -2.24
CHD1-207ENST00000511628 OR52R1Q8NGF1 315 aa1.03□□□□□ -2.24
CHD1-207ENST00000511628 OR8B3Q8NGG8 313 aa1.03□□□□□ -2.24
CHD1-207ENST00000511628 HIST1H2BHQ93079 126 aa1.03□□□□□ -2.24
CHD1-207ENST00000511628 DCUN1D1Q96GG9 259 aa1.03□□□□□ -2.24
CHD1-207ENST00000511628 HIST1H2BNQ99877 126 aa1.03□□□□□ -2.24
CHD1-207ENST00000511628 HIST1H2BMQ99879 126 aa1.03□□□□□ -2.24
CHD1-207ENST00000511628 TMEM147Q9BVK8 224 aa1.03□□□□□ -2.24
CHD1-207ENST00000511628 ULBP3Q9BZM4 244 aa1.03□□□□□ -2.24
CHD1-207ENST00000511628 RNASE7Q9H1E1 156 aaKnown RBP1.03□□□□□ -2.24
CHD1-207ENST00000511628 PRTFDC1Q9NRG1 225 aa1.03□□□□□ -2.24
CHD1-207ENST00000511628 PRELID3BQ9Y3B1 194 aa1.03□□□□□ -2.24
CHD1-207ENST00000511628 LHFPL6Q9Y693 200 aa1.03□□□□□ -2.24
CHD1-207ENST00000511628 TENM1Q9UKZ4 2725 aa1.03□□□□□ -2.24
CHD1-207ENST00000511628 ROBO3Q96MS0 1386 aa1.03□□□□□ -2.24
CHD1-207ENST00000511628 GLI3P10071 1580 aa1.03□□□□□ -2.24
CHD1-207ENST00000511628 TRBV6-5A0A0K0K1A5 114 aa1.02□□□□□ -2.25
CHD1-207ENST00000511628 EXOC1LA0A1B0GW35 172 aa1.02□□□□□ -2.25
CHD1-207ENST00000511628 PQLC2LA1A4F0 135 aa1.02□□□□□ -2.25
CHD1-207ENST00000511628 IRGMA1A4Y4 181 aa1.02□□□□□ -2.25
CHD1-207ENST00000511628 CCDC144AA2RUR9 1427 aa1.02□□□□□ -2.25
CHD1-207ENST00000511628 TMEM114B3SHH9 223 aa1.02□□□□□ -2.25
CHD1-207ENST00000511628 BUB1B-PAK6H3BSN5 160 aa1.02□□□□□ -2.25
CHD1-207ENST00000511628 S100A6P06703 90 aa1.02□□□□□ -2.25
CHD1-207ENST00000511628 MAGEA12P43365 314 aa1.02□□□□□ -2.25
CHD1-207ENST00000511628 ZNF345Q14585 488 aa1.02□□□□□ -2.25
CHD1-207ENST00000511628 RPL22L1Q6P5R6 122 aaKnown RBP1.02□□□□□ -2.25
CHD1-207ENST00000511628 DHFR2Q86XF0 187 aa1.02□□□□□ -2.25
CHD1-207ENST00000511628 BPIFA4PQ86YQ2 179 aa1.02□□□□□ -2.25
CHD1-207ENST00000511628 C15orf53Q8NAA6 179 aa1.02□□□□□ -2.25
CHD1-207ENST00000511628 RASSF5Q8WWW0 418 aa1.02□□□□□ -2.25
CHD1-207ENST00000511628 H1FXQ92522 213 aaKnown RBP1.02□□□□□ -2.25
CHD1-207ENST00000511628 ITFG2Q969R8 447 aa1.02□□□□□ -2.25
CHD1-207ENST00000511628 TONSLQ96HA7 1378 aa1.02□□□□□ -2.25
CHD1-207ENST00000511628 DCSTAMPQ9H295 470 aa1.02□□□□□ -2.25
CHD1-207ENST00000511628 ZNF106Q9H2Y7 1883 aaKnown RBP1.02□□□□□ -2.25
CHD1-207ENST00000511628 CST9LQ9H4G1 147 aa1.02□□□□□ -2.25
CHD1-207ENST00000511628 C14orf105Q9NVL8 296 aa1.02□□□□□ -2.25
CHD1-207ENST00000511628 MYOFQ9NZM1 2061 aa1.02□□□□□ -2.25
CHD1-207ENST00000511628 SDK1Q7Z5N4 2213 aa1.01□□□□□ -2.25
CHD1-207ENST00000511628 RTTNQ86VV8 2226 aa1.01□□□□□ -2.25
CHD1-207ENST00000511628 NUP155O75694 1391 aa1.01□□□□□ -2.25
CHD1-207ENST00000511628 FCGBPQ9Y6R7 5405 aaPredicted RBP1.01□□□□□ -2.25
CHD1-207ENST00000511628 TTC21AQ8NDW8 1320 aa1.01□□□□□ -2.25
CHD1-207ENST00000511628 DPRXA6NFQ7 191 aa1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms