RNA–Protein interactions for RNA: ENST00000511116.5

SMAD5-207, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-207ENST00000511116 IGHV3-21A0A0B4J1V1 117 aa16.77■□□□□ 0.28
SMAD5-207ENST00000511116 IGHV7-4-1A0A0J9YVY3 117 aa16.77■□□□□ 0.28
SMAD5-207ENST00000511116 CHEK1O14757 476 aa16.77■□□□□ 0.28
SMAD5-207ENST00000511116 ZNF207O43670 478 aaKnown RBP16.77■□□□□ 0.28
SMAD5-207ENST00000511116 CMC4P56277 68 aaPredicted RBP16.77■□□□□ 0.28
SMAD5-207ENST00000511116 FAM90A2PQ658T7 463 aa16.77■□□□□ 0.28
SMAD5-207ENST00000511116 APRG1Q8IVJ8 170 aa16.77■□□□□ 0.28
SMAD5-207ENST00000511116 MOB3AQ96BX8 217 aa16.77■□□□□ 0.28
SMAD5-207ENST00000511116 OR51B2Q9Y5P1 312 aa16.77■□□□□ 0.28
SMAD5-207ENST00000511116 PGLYRP1O75594 196 aaPredicted RBP16.76■□□□□ 0.27
SMAD5-207ENST00000511116 MXD1Q05195 221 aa16.76■□□□□ 0.27
SMAD5-207ENST00000511116 OR1P1Q8NH06 330 aa16.76■□□□□ 0.27
SMAD5-207ENST00000511116 FCAMRQ8WWV6 532 aa16.76■□□□□ 0.27
SMAD5-207ENST00000511116 RHPN1-AS1Q9BWJ2 59 aa16.76■□□□□ 0.27
SMAD5-207ENST00000511116 DIABLOQ9NR28 239 aa16.76■□□□□ 0.27
SMAD5-207ENST00000511116 TMEM14BQ9NUH8 114 aa16.76■□□□□ 0.27
SMAD5-207ENST00000511116 MPTX1A8MV57 137 aa16.75■□□□□ 0.27
SMAD5-207ENST00000511116 TMEM127O75204 238 aa16.75■□□□□ 0.27
SMAD5-207ENST00000511116 RLN1P04808 185 aa16.75■□□□□ 0.27
SMAD5-207ENST00000511116 FCER2P06734 321 aa16.75■□□□□ 0.27
SMAD5-207ENST00000511116 HERV-K104P61576 105 aa16.75■□□□□ 0.27
SMAD5-207ENST00000511116 ZNF124Q15973 351 aa16.75■□□□□ 0.27
SMAD5-207ENST00000511116 DGCR14Q96DF8 476 aaKnown RBP16.75■□□□□ 0.27
SMAD5-207ENST00000511116 MFFQ9GZY8 342 aa16.75■□□□□ 0.27
SMAD5-207ENST00000511116 RNF167Q9H6Y7 350 aa16.75■□□□□ 0.27
SMAD5-207ENST00000511116 NSG2Q9Y328 171 aa16.75■□□□□ 0.27
SMAD5-207ENST00000511116 KRASP01116 189 aa16.74■□□□□ 0.27
SMAD5-207ENST00000511116 LPAR6P43657 344 aa16.74■□□□□ 0.27
SMAD5-207ENST00000511116 RELQ04864 619 aaPredicted RBP16.74■□□□□ 0.27
SMAD5-207ENST00000511116 Q56UQ5 140 aa16.74■□□□□ 0.27
SMAD5-207ENST00000511116 IDNKQ5T6J7 187 aa16.74■□□□□ 0.27
SMAD5-207ENST00000511116 UBAC2Q8NBM4 344 aa16.74■□□□□ 0.27
SMAD5-207ENST00000511116 TMEM116Q8NCL8 245 aa16.74■□□□□ 0.27
SMAD5-207ENST00000511116 TMEM56Q96MV1 263 aa16.74■□□□□ 0.27
SMAD5-207ENST00000511116 TXN2Q99757 166 aa16.74■□□□□ 0.27
SMAD5-207ENST00000511116 RARRES2Q99969 163 aa16.74■□□□□ 0.27
SMAD5-207ENST00000511116 HINT2Q9BX68 163 aa16.74■□□□□ 0.27
SMAD5-207ENST00000511116 EHFQ9NZC4 300 aa16.74■□□□□ 0.27
SMAD5-207ENST00000511116 PRNDQ9UKY0 176 aa16.74■□□□□ 0.27
SMAD5-207ENST00000511116 KIAA1109Q2LD37 5005 aa16.73■□□□□ 0.27
SMAD5-207ENST00000511116 DBX1A6NMT0 343 aa16.73■□□□□ 0.27
SMAD5-207ENST00000511116 I3L2K1 104 aa16.73■□□□□ 0.27
SMAD5-207ENST00000511116 SNAPC5O75971 98 aa16.73■□□□□ 0.27
SMAD5-207ENST00000511116 G6PCP35575 357 aa16.73■□□□□ 0.27
SMAD5-207ENST00000511116 FKBP11Q9NYL4 201 aa16.73■□□□□ 0.27
SMAD5-207ENST00000511116 C15orf61A6NNL5 157 aa16.72■□□□□ 0.27
SMAD5-207ENST00000511116 NUPL2O15504 423 aaKnown RBP16.72■□□□□ 0.27
SMAD5-207ENST00000511116 XRCC3O43542 346 aa16.72■□□□□ 0.27
SMAD5-207ENST00000511116 NAT1P18440 290 aa16.72■□□□□ 0.27
SMAD5-207ENST00000511116 RFX2P48378 723 aa16.72■□□□□ 0.27
SMAD5-207ENST00000511116 TCTAP57738 103 aa16.72■□□□□ 0.27
SMAD5-207ENST00000511116 NANOS2P60321 138 aaKnown RBP16.72■□□□□ 0.27
SMAD5-207ENST00000511116 ZNF114Q8NC26 417 aa16.72■□□□□ 0.27
SMAD5-207ENST00000511116 C11orf45Q8TAV5 145 aa16.72■□□□□ 0.27
SMAD5-207ENST00000511116 ZNF2Q9BSG1 426 aaPredicted RBP16.72■□□□□ 0.27
SMAD5-207ENST00000511116 NXF2Q9GZY0 626 aaKnown RBP16.72■□□□□ 0.27
SMAD5-207ENST00000511116 FAM212BQ9NTI7 297 aaPredicted RBP16.72■□□□□ 0.27
SMAD5-207ENST00000511116 PCLOQ9Y6V0 5065 aa16.71■□□□□ 0.27
SMAD5-207ENST00000511116 MEIS3P1A6NDR6 274 aa16.71■□□□□ 0.27
SMAD5-207ENST00000511116 OR11H2Q8NH07 326 aa16.71■□□□□ 0.27
SMAD5-207ENST00000511116 TSC22D3Q99576 134 aa16.71■□□□□ 0.27
SMAD5-207ENST00000511116 YTHDF1Q9BYJ9 559 aaKnown RBP16.71■□□□□ 0.27
SMAD5-207ENST00000511116 FXYD6Q9H0Q3 95 aa16.71■□□□□ 0.27
SMAD5-207ENST00000511116 CD5P06127 495 aa16.7■□□□□ 0.26
SMAD5-207ENST00000511116 MFAP4P55083 255 aa16.7■□□□□ 0.26
SMAD5-207ENST00000511116 PRR20EP86478 221 aa16.7■□□□□ 0.26
SMAD5-207ENST00000511116 PRR20CP86479 221 aa16.7■□□□□ 0.26
SMAD5-207ENST00000511116 PRR20DP86480 221 aa16.7■□□□□ 0.26
SMAD5-207ENST00000511116 PRR20BP86481 221 aa16.7■□□□□ 0.26
SMAD5-207ENST00000511116 PRR20AP86496 221 aa16.7■□□□□ 0.26
SMAD5-207ENST00000511116 RBMS2Q15434 407 aaKnown RBP16.7■□□□□ 0.26
SMAD5-207ENST00000511116 CMTM1Q8IZ96 169 aa16.7■□□□□ 0.26
SMAD5-207ENST00000511116 IFT46Q9NQC8 304 aa16.7■□□□□ 0.26
SMAD5-207ENST00000511116 TRAV14DV4A0A0A6YYC5 116 aa16.69■□□□□ 0.26
SMAD5-207ENST00000511116 GPR31O00270 319 aa16.69■□□□□ 0.26
SMAD5-207ENST00000511116 VSIRQ9H7M9 311 aa16.69■□□□□ 0.26
SMAD5-207ENST00000511116 IGHV3-49A0A0A0MS15 119 aa16.68■□□□□ 0.26
SMAD5-207ENST00000511116 IFNA4P05014 189 aa16.68■□□□□ 0.26
SMAD5-207ENST00000511116 TFPI2P48307 235 aa16.68■□□□□ 0.26
SMAD5-207ENST00000511116 TAS2R46P59540 309 aa16.68■□□□□ 0.26
SMAD5-207ENST00000511116 SLC25A46Q96AG3 418 aa16.68■□□□□ 0.26
SMAD5-207ENST00000511116 SEC22AQ96IW7 307 aa16.68■□□□□ 0.26
SMAD5-207ENST00000511116 FAT2Q9NYQ8 4349 aa16.67■□□□□ 0.26
SMAD5-207ENST00000511116 TRAV2A0A0B4J234 112 aa16.67■□□□□ 0.26
SMAD5-207ENST00000511116 LOC100506127A0A0U1RQW1 187 aa16.67■□□□□ 0.26
SMAD5-207ENST00000511116 C2CD4CQ8TF44 421 aa16.67■□□□□ 0.26
SMAD5-207ENST00000511116 CMTM3Q96MX0 182 aa16.67■□□□□ 0.26
SMAD5-207ENST00000511116 FBXL17Q9UF56 701 aa16.67■□□□□ 0.26
SMAD5-207ENST00000511116 DFFBO76075 338 aa16.66■□□□□ 0.26
SMAD5-207ENST00000511116 YIF1AO95070 293 aa16.66■□□□□ 0.26
SMAD5-207ENST00000511116 MT-CO2P00403 227 aa16.66■□□□□ 0.26
SMAD5-207ENST00000511116 PMP2P02689 132 aa16.66■□□□□ 0.26
SMAD5-207ENST00000511116 PRCDQ00LT1 54 aa16.66■□□□□ 0.26
SMAD5-207ENST00000511116 TCF24Q7RTU0 167 aa16.66■□□□□ 0.26
SMAD5-207ENST00000511116 TSPAN14Q8NG11 270 aa16.66■□□□□ 0.26
SMAD5-207ENST00000511116 OR5H2Q8NGV7 314 aa16.66■□□□□ 0.26
SMAD5-207ENST00000511116 MISP3Q96FF7 219 aa16.66■□□□□ 0.26
SMAD5-207ENST00000511116 S100A16Q96FQ6 103 aaKnown RBP16.66■□□□□ 0.26
SMAD5-207ENST00000511116 HRH4Q9H3N8 390 aa16.66■□□□□ 0.26
SMAD5-207ENST00000511116 IGKV3-7A0A075B6H7 116 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms