RNA–Protein interactions for RNA: ENST00000510187.5

SQSTM1-213, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-213ENST00000510187 HSPE1P61604 102 aaKnown RBP13.09□□□□□ -0.31
SQSTM1-213ENST00000510187 CT45A1Q5HYN5 189 aa13.09□□□□□ -0.31
SQSTM1-213ENST00000510187 GCSAMLQ5JQS6 135 aa13.09□□□□□ -0.31
SQSTM1-213ENST00000510187 ACTL10Q5JWF8 245 aa13.09□□□□□ -0.31
SQSTM1-213ENST00000510187 STUMQ69YW2 141 aa13.09□□□□□ -0.31
SQSTM1-213ENST00000510187 NECAP1Q8NC96 275 aa13.09□□□□□ -0.31
SQSTM1-213ENST00000510187 OR1P1Q8NH06 330 aa13.09□□□□□ -0.31
SQSTM1-213ENST00000510187 CT45A3Q8NHU0 189 aa13.09□□□□□ -0.31
SQSTM1-213ENST00000510187 RNASEH2CQ8TDP1 164 aaKnown RBP13.09□□□□□ -0.31
SQSTM1-213ENST00000510187 PACRGQ96M98 296 aaPredicted RBP13.09□□□□□ -0.31
SQSTM1-213ENST00000510187 DYSFO75923 2080 aa13.09□□□□□ -0.31
SQSTM1-213ENST00000510187 SAA2-SAA4A0A096LPE2 208 aa13.08□□□□□ -0.32
SQSTM1-213ENST00000510187 TRAV3A0A0B4J244 114 aa13.08□□□□□ -0.32
SQSTM1-213ENST00000510187 LYNX1G3V0Z9 82 aa13.08□□□□□ -0.32
SQSTM1-213ENST00000510187 GATCO43716 136 aaKnown RBP13.08□□□□□ -0.32
SQSTM1-213ENST00000510187 LY6HO94772 140 aa13.08□□□□□ -0.32
SQSTM1-213ENST00000510187 SAA2P0DJI9 122 aaPredicted RBP13.08□□□□□ -0.32
SQSTM1-213ENST00000510187 LYNX1P0DP58 116 aa13.08□□□□□ -0.32
SQSTM1-213ENST00000510187 COL8A2P25067 703 aa13.08□□□□□ -0.32
SQSTM1-213ENST00000510187 PDLIM4P50479 330 aa13.08□□□□□ -0.32
SQSTM1-213ENST00000510187 FAM209BQ5JX69 171 aa13.08□□□□□ -0.32
SQSTM1-213ENST00000510187 ZNF439Q8NDP4 499 aa13.08□□□□□ -0.32
SQSTM1-213ENST00000510187 DEFB108BQ8NET1 73 aa13.08□□□□□ -0.32
SQSTM1-213ENST00000510187 OR5R1Q8NH85 324 aa13.08□□□□□ -0.32
SQSTM1-213ENST00000510187 CCL19Q99731 98 aa13.08□□□□□ -0.32
SQSTM1-213ENST00000510187 PCGF1Q9BSM1 259 aa13.08□□□□□ -0.32
SQSTM1-213ENST00000510187 ELOVL1Q9BW60 279 aa13.08□□□□□ -0.32
SQSTM1-213ENST00000510187 ENY2Q9NPA8 101 aa13.08□□□□□ -0.32
SQSTM1-213ENST00000510187 DSCAMO60469 2012 aa13.08□□□□□ -0.32
SQSTM1-213ENST00000510187 DVL1O14640 695 aa13.08□□□□□ -0.32
SQSTM1-213ENST00000510187 ARL14EPLP0DKL9 152 aa13.08□□□□□ -0.32
SQSTM1-213ENST00000510187 DEFA4P12838 97 aa13.08□□□□□ -0.32
SQSTM1-213ENST00000510187 NPY1RP25929 384 aa13.08□□□□□ -0.32
SQSTM1-213ENST00000510187 ATP5G3P48201 142 aa13.08□□□□□ -0.32
SQSTM1-213ENST00000510187 ATP5IP56385 69 aaPredicted RBP13.08□□□□□ -0.32
SQSTM1-213ENST00000510187 RAB31Q13636 194 aa13.08□□□□□ -0.32
SQSTM1-213ENST00000510187 PDZD11Q5EBL8 140 aa13.08□□□□□ -0.32
SQSTM1-213ENST00000510187 CST9LP1Q5W188 147 aa13.08□□□□□ -0.32
SQSTM1-213ENST00000510187 VKORC1L1Q8N0U8 176 aa13.08□□□□□ -0.32
SQSTM1-213ENST00000510187 SLC24A4Q8NFF2 622 aa13.08□□□□□ -0.32
SQSTM1-213ENST00000510187 CORO2AQ92828 525 aa13.08□□□□□ -0.32
SQSTM1-213ENST00000510187 RHOVQ96L33 236 aa13.08□□□□□ -0.32
SQSTM1-213ENST00000510187 IDI2-AS1Q9NZ38 188 aa13.08□□□□□ -0.32
SQSTM1-213ENST00000510187 PRNDQ9UKY0 176 aa13.08□□□□□ -0.32
SQSTM1-213ENST00000510187 DOPEY2Q9Y3R5 2298 aa13.07□□□□□ -0.32
SQSTM1-213ENST00000510187 PPIAL4EA0A075B759 164 aa13.07□□□□□ -0.32
SQSTM1-213ENST00000510187 A0A1W2PPQ1 181 aa13.07□□□□□ -0.32
SQSTM1-213ENST00000510187 PPIAL4DF5H284 164 aa13.07□□□□□ -0.32
SQSTM1-213ENST00000510187 OVOL3O00110 214 aa13.07□□□□□ -0.32
SQSTM1-213ENST00000510187 PPIAL4FP0DN26 164 aa13.07□□□□□ -0.32
SQSTM1-213ENST00000510187 RPL29P47914 159 aaKnown RBP13.07□□□□□ -0.32
SQSTM1-213ENST00000510187 MRPS11P82912 194 aaKnown RBP13.07□□□□□ -0.32
SQSTM1-213ENST00000510187 TEX36Q5VZQ5 186 aa13.07□□□□□ -0.32
SQSTM1-213ENST00000510187 MIC13Q5XKP0 118 aa13.07□□□□□ -0.32
SQSTM1-213ENST00000510187 OR4A47Q6IF82 309 aa13.07□□□□□ -0.32
SQSTM1-213ENST00000510187 TEPPQ6URK8 271 aa13.07□□□□□ -0.32
SQSTM1-213ENST00000510187 ABHD12Q8N2K0 398 aa13.07□□□□□ -0.32
SQSTM1-213ENST00000510187 PRDM13Q9H4Q3 707 aa13.07□□□□□ -0.32
SQSTM1-213ENST00000510187 PATZ1Q9HBE1 687 aaKnown RBP13.07□□□□□ -0.32
SQSTM1-213ENST00000510187 ZNF257Q9Y2Q1 563 aa13.07□□□□□ -0.32
SQSTM1-213ENST00000510187 PPIAL4AQ9Y536 164 aa13.07□□□□□ -0.32
SQSTM1-213ENST00000510187 ARL2-SNX15V9GYD0 113 aa13.07□□□□□ -0.32
SQSTM1-213ENST00000510187 NDUFB4O95168 129 aa13.06□□□□□ -0.32
SQSTM1-213ENST00000510187 MT-CO2P00403 227 aa13.06□□□□□ -0.32
SQSTM1-213ENST00000510187 IL6RP08887 468 aaPredicted RBP13.06□□□□□ -0.32
SQSTM1-213ENST00000510187 UBE2G2P60604 165 aa13.06□□□□□ -0.32
SQSTM1-213ENST00000510187 RHOBP62745 196 aa13.06□□□□□ -0.32
SQSTM1-213ENST00000510187 FOXL1Q12952 345 aa13.06□□□□□ -0.32
SQSTM1-213ENST00000510187 C1orf229Q6ZS94 237 aaPredicted RBP13.06□□□□□ -0.32
SQSTM1-213ENST00000510187 TMEM144Q7Z5S9 345 aa13.06□□□□□ -0.32
SQSTM1-213ENST00000510187 IGFBPL1Q8WX77 278 aa13.06□□□□□ -0.32
SQSTM1-213ENST00000510187 GAFA1Q96PS6 74 aa13.06□□□□□ -0.32
SQSTM1-213ENST00000510187 AKAP6Q13023 2319 aa13.06□□□□□ -0.32
SQSTM1-213ENST00000510187 DOCK11Q5JSL3 2073 aa13.06□□□□□ -0.32
SQSTM1-213ENST00000510187 XKRY2A2RUG3 117 aa13.05□□□□□ -0.32
SQSTM1-213ENST00000510187 NDUFS7O75251 213 aa13.05□□□□□ -0.32
SQSTM1-213ENST00000510187 ARSJQ5FYB0 599 aaPredicted RBP13.05□□□□□ -0.32
SQSTM1-213ENST00000510187 C1orf159Q96HA4 380 aa13.05□□□□□ -0.32
SQSTM1-213ENST00000510187 GCHFRP30047 84 aa13.05□□□□□ -0.32
SQSTM1-213ENST00000510187 EFNA4P52798 201 aa13.05□□□□□ -0.32
SQSTM1-213ENST00000510187 ZNF788Q6ZQV5 615 aa13.05□□□□□ -0.32
SQSTM1-213ENST00000510187 TCF23Q7RTU1 214 aa13.05□□□□□ -0.32
SQSTM1-213ENST00000510187 C11orf52Q96A22 123 aa13.05□□□□□ -0.32
SQSTM1-213ENST00000510187 TRAV9-1A0A075B6T8 112 aa13.04□□□□□ -0.32
SQSTM1-213ENST00000510187 MDFIC2A0A1B0GVS7 189 aa13.04□□□□□ -0.32
SQSTM1-213ENST00000510187 IGHV3-7P01780 117 aa13.04□□□□□ -0.32
SQSTM1-213ENST00000510187 AMBPP02760 352 aa13.04□□□□□ -0.32
SQSTM1-213ENST00000510187 SELLP14151 372 aa13.04□□□□□ -0.32
SQSTM1-213ENST00000510187 PKIAP61925 76 aa13.04□□□□□ -0.32
SQSTM1-213ENST00000510187 JOSD1Q15040 202 aaPredicted RBP13.04□□□□□ -0.32
SQSTM1-213ENST00000510187 CDPF1Q6NVV7 123 aa13.04□□□□□ -0.32
SQSTM1-213ENST00000510187 SLC25A48Q6ZT89 311 aaKnown RBP13.04□□□□□ -0.32
SQSTM1-213ENST00000510187 LYG1Q8N1E2 194 aa13.04□□□□□ -0.32
SQSTM1-213ENST00000510187 STPG3Q8N7X2 389 aa13.04□□□□□ -0.32
SQSTM1-213ENST00000510187 NRGNQ92686 78 aa13.04□□□□□ -0.32
SQSTM1-213ENST00000510187 SFRP2Q96HF1 295 aa13.04□□□□□ -0.32
SQSTM1-213ENST00000510187 SLC25A10Q9UBX3 287 aaPredicted RBP13.04□□□□□ -0.32
SQSTM1-213ENST00000510187 OR51B2Q9Y5P1 312 aa13.04□□□□□ -0.32
SQSTM1-213ENST00000510187 LY96Q9Y6Y9 160 aa13.04□□□□□ -0.32
SQSTM1-213ENST00000510187 TANC2Q9HCD6 1990 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms