RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 TMEM14BQ9NUH8 114 aa5.51□□□□□ -1.53
TOPBP1-207ENST00000509162 COA4Q9NYJ1 87 aa5.51□□□□□ -1.53
TOPBP1-207ENST00000509162 GPR132Q9UNW8 380 aa5.51□□□□□ -1.53
TOPBP1-207ENST00000509162 TENM3Q9P273 2699 aa5.5□□□□□ -1.53
TOPBP1-207ENST00000509162 A0A0B4J293 547 aa5.5□□□□□ -1.53
TOPBP1-207ENST00000509162 TEX50A0A1B0GTY4 177 aa5.5□□□□□ -1.53
TOPBP1-207ENST00000509162 PPP5D1E7EU14 171 aa5.5□□□□□ -1.53
TOPBP1-207ENST00000509162 H3BUA1 57 aa5.5□□□□□ -1.53
TOPBP1-207ENST00000509162 OR2J3O76001 311 aa5.5□□□□□ -1.53
TOPBP1-207ENST00000509162 PSMB6P28072 239 aa5.5□□□□□ -1.53
TOPBP1-207ENST00000509162 RHOGP84095 191 aa5.5□□□□□ -1.53
TOPBP1-207ENST00000509162 ZNF616Q08AN1 781 aa5.5□□□□□ -1.53
TOPBP1-207ENST00000509162 CBX3Q13185 183 aa5.5□□□□□ -1.53
TOPBP1-207ENST00000509162 EXOSC2Q13868 293 aaKnown RBP5.5□□□□□ -1.53
TOPBP1-207ENST00000509162 TMEM187Q14656 261 aa5.5□□□□□ -1.53
TOPBP1-207ENST00000509162 MEF2DQ14814 521 aa5.5□□□□□ -1.53
TOPBP1-207ENST00000509162 PDLIM3Q53GG5 364 aaPredicted RBP5.5□□□□□ -1.53
TOPBP1-207ENST00000509162 ZNF343Q6P1L6 599 aa5.5□□□□□ -1.53
TOPBP1-207ENST00000509162 Q8N402 240 aa5.5□□□□□ -1.53
TOPBP1-207ENST00000509162 GDPD1Q8N9F7 314 aa5.5□□□□□ -1.53
TOPBP1-207ENST00000509162 OR1N2Q8NGR9 330 aa5.5□□□□□ -1.53
TOPBP1-207ENST00000509162 OR4A5Q8NH83 315 aa5.5□□□□□ -1.53
TOPBP1-207ENST00000509162 GLYATL2Q8WU03 294 aa5.5□□□□□ -1.53
TOPBP1-207ENST00000509162 ZNF486Q96H40 463 aaPredicted RBP5.5□□□□□ -1.53
TOPBP1-207ENST00000509162 FYTTD1Q96QD9 318 aaKnown RBP5.5□□□□□ -1.53
TOPBP1-207ENST00000509162 C1orf43Q9BWL3 253 aa5.5□□□□□ -1.53
TOPBP1-207ENST00000509162 GON7Q9BXV9 100 aa5.5□□□□□ -1.53
TOPBP1-207ENST00000509162 NAA60Q9H7X0 242 aa5.5□□□□□ -1.53
TOPBP1-207ENST00000509162 FAM212BQ9NTI7 297 aaPredicted RBP5.5□□□□□ -1.53
TOPBP1-207ENST00000509162 MRPL36Q9P0J6 103 aaKnown RBP5.5□□□□□ -1.53
TOPBP1-207ENST00000509162 C3orf85A0A1B0GTC6 90 aa5.49□□□□□ -1.53
TOPBP1-207ENST00000509162 LINC01619G3V211 115 aa5.49□□□□□ -1.53
TOPBP1-207ENST00000509162 K7EIM0 57 aa5.49□□□□□ -1.53
TOPBP1-207ENST00000509162 PLA2G10O15496 165 aa5.49□□□□□ -1.53
TOPBP1-207ENST00000509162 HRASP01112 189 aa5.49□□□□□ -1.53
TOPBP1-207ENST00000509162 HLA-AP01891 365 aaKnown RBP5.49□□□□□ -1.53
TOPBP1-207ENST00000509162 FGF2P09038 288 aa5.49□□□□□ -1.53
TOPBP1-207ENST00000509162 IL7P13232 177 aa5.49□□□□□ -1.53
TOPBP1-207ENST00000509162 SLC6A1P30531 599 aa5.49□□□□□ -1.53
TOPBP1-207ENST00000509162 CCR6P51684 374 aa5.49□□□□□ -1.53
TOPBP1-207ENST00000509162 RAB25P57735 213 aa5.49□□□□□ -1.53
TOPBP1-207ENST00000509162 IFITM3Q01628 133 aa5.49□□□□□ -1.53
TOPBP1-207ENST00000509162 AARDQ4LEZ3 155 aa5.49□□□□□ -1.53
TOPBP1-207ENST00000509162 PYDC2Q56P42 97 aa5.49□□□□□ -1.53
TOPBP1-207ENST00000509162 FAM219AQ8IW50 185 aa5.49□□□□□ -1.53
TOPBP1-207ENST00000509162 SELENOHQ8IZQ5 122 aaKnown RBP5.49□□□□□ -1.53
TOPBP1-207ENST00000509162 CADM3Q8N126 398 aa5.49□□□□□ -1.53
TOPBP1-207ENST00000509162 DMBX1Q8NFW5 382 aa5.49□□□□□ -1.53
TOPBP1-207ENST00000509162 VSTM2AQ8TAG5 236 aa5.49□□□□□ -1.53
TOPBP1-207ENST00000509162 PHB2Q99623 299 aa5.49□□□□□ -1.53
TOPBP1-207ENST00000509162 TMEM222Q9H0R3 208 aa5.49□□□□□ -1.53
TOPBP1-207ENST00000509162 FLVCR2Q9UPI3 526 aa5.49□□□□□ -1.53
TOPBP1-207ENST00000509162 ZNF257Q9Y2Q1 563 aa5.49□□□□□ -1.53
TOPBP1-207ENST00000509162 HYDINQ4G0P3 5121 aa5.49□□□□□ -1.53
TOPBP1-207ENST00000509162 ALMS1Q8TCU4 4167 aa5.48□□□□□ -1.53
TOPBP1-207ENST00000509162 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.48□□□□□ -1.53
TOPBP1-207ENST00000509162 IGHV3-21A0A0B4J1V1 117 aa5.48□□□□□ -1.53
TOPBP1-207ENST00000509162 DISC1C4P0D8 188 aa5.48□□□□□ -1.53
TOPBP1-207ENST00000509162 ST8SIA3O43173 380 aa5.48□□□□□ -1.53
TOPBP1-207ENST00000509162 IFNA6P05013 189 aa5.48□□□□□ -1.53
TOPBP1-207ENST00000509162 MAS1LP35410 378 aa5.48□□□□□ -1.53
TOPBP1-207ENST00000509162 PRCDQ00LT1 54 aa5.48□□□□□ -1.53
TOPBP1-207ENST00000509162 SURF2Q15527 256 aaPredicted RBP5.48□□□□□ -1.53
TOPBP1-207ENST00000509162 C15orf32Q32M92 178 aa5.48□□□□□ -1.53
TOPBP1-207ENST00000509162 ANKRD55Q3KP44 614 aa5.48□□□□□ -1.53
TOPBP1-207ENST00000509162 NMSQ5H8A3 153 aa5.48□□□□□ -1.53
TOPBP1-207ENST00000509162 PVRIGQ6DKI7 326 aa5.48□□□□□ -1.53
TOPBP1-207ENST00000509162 TMEM65Q6PI78 240 aa5.48□□□□□ -1.53
TOPBP1-207ENST00000509162 CMTM1Q8IZ96 169 aa5.48□□□□□ -1.53
TOPBP1-207ENST00000509162 SLC35G3Q8N808 338 aa5.48□□□□□ -1.53
TOPBP1-207ENST00000509162 ZNF502Q8TBZ5 544 aa5.48□□□□□ -1.53
TOPBP1-207ENST00000509162 CD300LFQ8TDQ1 290 aa5.48□□□□□ -1.53
TOPBP1-207ENST00000509162 C15orf40Q8WUR7 153 aa5.48□□□□□ -1.53
TOPBP1-207ENST00000509162 GPR146Q96CH1 333 aa5.48□□□□□ -1.53
TOPBP1-207ENST00000509162 PRR25Q96S07 402 aa5.48□□□□□ -1.53
TOPBP1-207ENST00000509162 SPIN2AQ99865 258 aa5.48□□□□□ -1.53
TOPBP1-207ENST00000509162 PRRT1Q99946 306 aa5.48□□□□□ -1.53
TOPBP1-207ENST00000509162 SPIN2BQ9BPZ2 258 aa5.48□□□□□ -1.53
TOPBP1-207ENST00000509162 SLA2Q9H6Q3 261 aa5.48□□□□□ -1.53
TOPBP1-207ENST00000509162 RABL2AQ9UBK7 228 aaPredicted RBP5.48□□□□□ -1.53
TOPBP1-207ENST00000509162 TBC1D24Q9ULP9 559 aa5.48□□□□□ -1.53
TOPBP1-207ENST00000509162 RABL2BQ9UNT1 228 aa5.48□□□□□ -1.53
TOPBP1-207ENST00000509162 OR51B2Q9Y5P1 312 aa5.48□□□□□ -1.53
TOPBP1-207ENST00000509162 F11RQ9Y624 299 aaKnown RBP5.48□□□□□ -1.53
TOPBP1-207ENST00000509162 SELENOKQ9Y6D0 94 aa5.48□□□□□ -1.53
TOPBP1-207ENST00000509162 IZUMO1RA6ND01 250 aa5.47□□□□□ -1.53
TOPBP1-207ENST00000509162 FAM223BA6NKX1 122 aa5.47□□□□□ -1.53
TOPBP1-207ENST00000509162 SEC14L6B5MCN3 397 aa5.47□□□□□ -1.53
TOPBP1-207ENST00000509162 I3L2K1 104 aa5.47□□□□□ -1.53
TOPBP1-207ENST00000509162 CREBL2O60519 120 aaPredicted RBP5.47□□□□□ -1.53
TOPBP1-207ENST00000509162 NXPH3O95157 252 aa5.47□□□□□ -1.53
TOPBP1-207ENST00000509162 CDS2O95674 445 aa5.47□□□□□ -1.53
TOPBP1-207ENST00000509162 HSPB1P04792 205 aaKnown RBP5.47□□□□□ -1.53
TOPBP1-207ENST00000509162 OR8U8P0C7N1 319 aa5.47□□□□□ -1.53
TOPBP1-207ENST00000509162 OR13C7P0DN81 318 aa5.47□□□□□ -1.53
TOPBP1-207ENST00000509162 GYPEP15421 78 aa5.47□□□□□ -1.53
TOPBP1-207ENST00000509162 CD40LGP29965 261 aa5.47□□□□□ -1.53
TOPBP1-207ENST00000509162 DHODHQ02127 395 aa5.47□□□□□ -1.53
TOPBP1-207ENST00000509162 TMEM267Q0VDI3 215 aaPredicted RBP5.47□□□□□ -1.53
TOPBP1-207ENST00000509162 PPP1R1AQ13522 171 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms