RNA–Protein interactions for RNA: ENST00000508604.5

NUP54-208, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-208ENST00000508604 H0YJW9 148 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 H3BQ15 152 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 H7C1C5 153 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 YPEL1O60688 119 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 RAMP1O60894 148 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 REM1O75628 298 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 DIRAS1O95057 198 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 OR2H2O95918 312 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 CD8AP01732 235 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 TRGC2P03986 189 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 TACSTD2P09758 323 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 CT62P0C5K7 136 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 SEC11BP0C7V7 166 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 ZNF728P0DKX0 622 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 IGLC2P0DOY2 106 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 IGLC3P0DOY3 106 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 SLC25A4P12235 298 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 TPT1P13693 172 aaKnown RBP1.26□□□□□ -2.21
NUP54-208ENST00000508604 IGFBP3P17936 291 aaPredicted RBP1.26□□□□□ -2.21
NUP54-208ENST00000508604 PGCP20142 388 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 TSPOP30536 169 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 ZNF93P35789 620 aaPredicted RBP1.26□□□□□ -2.21
NUP54-208ENST00000508604 RPL13AP40429 203 aaKnown RBP1.26□□□□□ -2.21
NUP54-208ENST00000508604 NBL1P41271 181 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 GZMMP51124 257 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 RND2P52198 227 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 EMP1P54849 157 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 TPPP2P59282 170 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 TAS2R19P59542 299 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 UBE2MP61081 183 aaKnown RBP1.26□□□□□ -2.21
NUP54-208ENST00000508604 RPS15AP62244 130 aaKnown RBP1.26□□□□□ -2.21
NUP54-208ENST00000508604 RPS23P62266 143 aaKnown RBP1.26□□□□□ -2.21
NUP54-208ENST00000508604 RPL31P62899 125 aaKnown RBP1.26□□□□□ -2.21
NUP54-208ENST00000508604 ARG2P78540 354 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 FMODQ06828 376 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 KLRD1Q13241 179 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 FAM53BQ14153 422 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 ENDOGQ14249 297 aaKnown RBP1.26□□□□□ -2.21
NUP54-208ENST00000508604 PAFAH1B3Q15102 231 aaKnown RBP1.26□□□□□ -2.21
NUP54-208ENST00000508604 ELOBQ15370 118 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 HLA-DRB5Q30154 266 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 ACOT6Q3I5F7 207 aaPredicted RBP1.26□□□□□ -2.21
NUP54-208ENST00000508604 TIGITQ495A1 244 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 GGTA1PQ4G0N0 100 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 TCEAL5Q5H9L2 206 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 SPATA31B1PQ5VZV4 182 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 TMEM215Q68D42 235 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 AMMECR1LQ6DCA0 310 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 LAIR2Q6ISS4 152 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 TNFAIP8L2Q6P589 184 aaPredicted RBP1.26□□□□□ -2.21
NUP54-208ENST00000508604 TRIM40Q6P9F5 258 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 DUX4L9Q6RFH8 374 aaPredicted RBP1.26□□□□□ -2.21
NUP54-208ENST00000508604 UNQ5815/PRO19632Q6UWF5 114 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 GLIPR1L1Q6UWM5 242 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 Q6ZS92 163 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 Q6ZT83 130 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 CLEC20AQ6ZU45 233 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 HSD11B1LQ7Z5J1 315 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 CLDN19Q8N6F1 224 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 GATD1Q8NB37 220 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 ZNF740Q8NDX6 193 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 OR52R1Q8NGF1 315 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 OR1L8Q8NGR8 309 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 OR2K2Q8NGT1 345 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 OR1F12Q8NHA8 337 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 SLC25A40Q8TBP6 338 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 C7orf33Q8WU49 177 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 OR5P2Q8WZ92 322 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 OR5P3Q8WZ94 311 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 NDRG1Q92597 394 aaKnown RBP1.26□□□□□ -2.21
NUP54-208ENST00000508604 BORCS7Q96B45 105 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 PPCDCQ96CD2 204 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 LRRC58Q96CX6 371 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 DNAJC19Q96DA6 116 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 MS4A6EQ96DS6 147 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 YPEL2Q96QA6 119 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 OR4C12Q96R67 309 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 MCHR1Q99705 422 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 GABRG3Q99928 467 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 TBL1YQ9BQ87 522 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 TMEM70Q9BUB7 260 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 MRPL32Q9BYC8 188 aaKnown RBP1.26□□□□□ -2.21
NUP54-208ENST00000508604 CHIAQ9BZP6 476 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 WDR61Q9GZS3 305 aaKnown RBP1.26□□□□□ -2.21
NUP54-208ENST00000508604 OR2D2Q9H210 308 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 NMRAL1Q9HBL8 299 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 TMEM9BQ9NQ34 198 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 PRTFDC1Q9NRG1 225 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 TMEM106BQ9NUM4 274 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 ACER3Q9NUN7 267 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 AIG1Q9NVV5 245 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 C1orf123Q9NWV4 160 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 TXNL4BQ9NX01 149 aaKnown RBP1.26□□□□□ -2.21
NUP54-208ENST00000508604 TAS2R5Q9NYW4 299 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 SLC25A37Q9NYZ2 338 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 GNG12Q9UBI6 72 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 PRNDQ9UKY0 176 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 FUT9Q9Y231 359 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 HIGD1AQ9Y241 93 aa1.26□□□□□ -2.21
NUP54-208ENST00000508604 YTHDF2Q9Y5A9 579 aaKnown RBP1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms