RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 PLEKHA3Q9HB20 300 aa8.22□□□□□ -1.09
TPM3-217ENST00000504663 FKBP11Q9NYL4 201 aa8.22□□□□□ -1.09
TPM3-217ENST00000504663 CACFD1Q9UGQ2 172 aa8.22□□□□□ -1.09
TPM3-217ENST00000504663 ITGB1BP2Q9UKP3 347 aa8.22□□□□□ -1.09
TPM3-217ENST00000504663 CUBNO60494 3623 aa8.22□□□□□ -1.09
TPM3-217ENST00000504663 SONP18583 2426 aaKnown RBP8.22□□□□□ -1.09
TPM3-217ENST00000504663 SH2D7A6NKC9 451 aaPredicted RBP8.21□□□□□ -1.1
TPM3-217ENST00000504663 IGHV4-59P01825 116 aa8.21□□□□□ -1.1
TPM3-217ENST00000504663 IER3P46695 156 aa8.21□□□□□ -1.1
TPM3-217ENST00000504663 CX3CL1P78423 397 aa8.21□□□□□ -1.1
TPM3-217ENST00000504663 C2orf83Q53S99 150 aa8.21□□□□□ -1.1
TPM3-217ENST00000504663 C19orf54Q5BKX5 351 aa8.21□□□□□ -1.1
TPM3-217ENST00000504663 SLC51BQ86UW2 128 aa8.21□□□□□ -1.1
TPM3-217ENST00000504663 SLC24A4Q8NFF2 622 aa8.21□□□□□ -1.1
TPM3-217ENST00000504663 OR5C1Q8NGR4 320 aa8.21□□□□□ -1.1
TPM3-217ENST00000504663 NANPQ8TBE9 248 aa8.21□□□□□ -1.1
TPM3-217ENST00000504663 P2RX4Q99571 388 aa8.21□□□□□ -1.1
TPM3-217ENST00000504663 SMR3AQ99954 134 aa8.21□□□□□ -1.1
TPM3-217ENST00000504663 COMMD5Q9GZQ3 224 aa8.21□□□□□ -1.1
TPM3-217ENST00000504663 SLC25A31Q9H0C2 315 aa8.21□□□□□ -1.1
TPM3-217ENST00000504663 STRAPQ9Y3F4 350 aaKnown RBP8.21□□□□□ -1.1
TPM3-217ENST00000504663 HIVEP1P15822 2718 aa8.21□□□□□ -1.1
TPM3-217ENST00000504663 RPS10-NUDT3A0A1W2PQS6 291 aa8.2□□□□□ -1.1
TPM3-217ENST00000504663 KANTRA0A1W2PQU2 76 aa8.2□□□□□ -1.1
TPM3-217ENST00000504663 LINC01548A6NM66 108 aa8.2□□□□□ -1.1
TPM3-217ENST00000504663 TAAR5O14804 337 aa8.2□□□□□ -1.1
TPM3-217ENST00000504663 FGF16O43320 207 aa8.2□□□□□ -1.1
TPM3-217ENST00000504663 LY86O95711 162 aa8.2□□□□□ -1.1
TPM3-217ENST00000504663 NPY1RP25929 384 aa8.2□□□□□ -1.1
TPM3-217ENST00000504663 CRIP2P52943 208 aaPredicted RBP8.2□□□□□ -1.1
TPM3-217ENST00000504663 UBA52P62987 128 aaKnown RBP8.2□□□□□ -1.1
TPM3-217ENST00000504663 SLC38A11Q08AI6 406 aa8.2□□□□□ -1.1
TPM3-217ENST00000504663 EXOSC2Q13868 293 aaKnown RBP8.2□□□□□ -1.1
TPM3-217ENST00000504663 CLINT1Q14677 625 aa8.2□□□□□ -1.1
TPM3-217ENST00000504663 LY6EQ16553 131 aa8.2□□□□□ -1.1
TPM3-217ENST00000504663 TEX261Q6UWH6 196 aa8.2□□□□□ -1.1
TPM3-217ENST00000504663 ZNF562Q6V9R5 426 aa8.2□□□□□ -1.1
TPM3-217ENST00000504663 Q6YL49 198 aa8.2□□□□□ -1.1
TPM3-217ENST00000504663 SPNS3Q6ZMD2 512 aa8.2□□□□□ -1.1
TPM3-217ENST00000504663 TMEM217Q8N7C4 229 aa8.2□□□□□ -1.1
TPM3-217ENST00000504663 UBAC2Q8NBM4 344 aa8.2□□□□□ -1.1
TPM3-217ENST00000504663 ATP5SQ99766 215 aa8.2□□□□□ -1.1
TPM3-217ENST00000504663 FAM103A1Q9BTL3 118 aaKnown RBP8.2□□□□□ -1.1
TPM3-217ENST00000504663 HINT2Q9BX68 163 aa8.2□□□□□ -1.1
TPM3-217ENST00000504663 ZNF471Q9BX82 626 aaPredicted RBP8.2□□□□□ -1.1
TPM3-217ENST00000504663 HEYLQ9NQ87 328 aaPredicted RBP8.2□□□□□ -1.1
TPM3-217ENST00000504663 KIAA1456Q9P272 454 aa8.2□□□□□ -1.1
TPM3-217ENST00000504663 MOB4Q9Y3A3 225 aa8.2□□□□□ -1.1
TPM3-217ENST00000504663 RFNGQ9Y644 331 aa8.2□□□□□ -1.1
TPM3-217ENST00000504663 U3KQ87 197 aa8.2□□□□□ -1.1
TPM3-217ENST00000504663 A0A1W2PN81 502 aa8.19□□□□□ -1.1
TPM3-217ENST00000504663 REG1AP05451 166 aa8.19□□□□□ -1.1
TPM3-217ENST00000504663 CRYGCP07315 174 aa8.19□□□□□ -1.1
TPM3-217ENST00000504663 CTRB1P17538 263 aa8.19□□□□□ -1.1
TPM3-217ENST00000504663 CHRNA7P36544 502 aa8.19□□□□□ -1.1
TPM3-217ENST00000504663 NUP62P37198 522 aaPredicted RBP8.19□□□□□ -1.1
TPM3-217ENST00000504663 GNB1P62873 340 aa8.19□□□□□ -1.1
TPM3-217ENST00000504663 FXYD3Q14802 87 aa8.19□□□□□ -1.1
TPM3-217ENST00000504663 KLK9Q2XQG4 91 aa8.19□□□□□ -1.1
TPM3-217ENST00000504663 CTRB2Q6GPI1 263 aa8.19□□□□□ -1.1
TPM3-217ENST00000504663 Q6ZS46 218 aa8.19□□□□□ -1.1
TPM3-217ENST00000504663 STX12Q86Y82 276 aa8.19□□□□□ -1.1
TPM3-217ENST00000504663 ZNF680Q8NEM1 530 aa8.19□□□□□ -1.1
TPM3-217ENST00000504663 OR1S2Q8NGQ3 325 aa8.19□□□□□ -1.1
TPM3-217ENST00000504663 ARPC1AQ92747 370 aa8.19□□□□□ -1.1
TPM3-217ENST00000504663 SRSF8Q9BRL6 282 aaKnown RBP8.19□□□□□ -1.1
TPM3-217ENST00000504663 GINS3Q9BRX5 216 aa8.19□□□□□ -1.1
TPM3-217ENST00000504663 PARD6GQ9BYG4 376 aaPredicted RBP8.19□□□□□ -1.1
TPM3-217ENST00000504663 FNDC4Q9H6D8 234 aaPredicted RBP8.19□□□□□ -1.1
TPM3-217ENST00000504663 TMEM160Q9NX00 188 aa8.19□□□□□ -1.1
TPM3-217ENST00000504663 MRPL36Q9P0J6 103 aaKnown RBP8.19□□□□□ -1.1
TPM3-217ENST00000504663 KLK9Q9UKQ9 250 aa8.19□□□□□ -1.1
TPM3-217ENST00000504663 FAM96BQ9Y3D0 163 aa8.19□□□□□ -1.1
TPM3-217ENST00000504663 SETXQ7Z333 2677 aaKnown RBP8.19□□□□□ -1.1
TPM3-217ENST00000504663 NSD1Q96L73 2696 aaPredicted RBP8.18□□□□□ -1.1
TPM3-217ENST00000504663 NCBP2LA6PVI3 153 aaKnown RBP8.18□□□□□ -1.1
TPM3-217ENST00000504663 LY6G6DO95868 133 aa8.18□□□□□ -1.1
TPM3-217ENST00000504663 IFNA10P01566 189 aa8.18□□□□□ -1.1
TPM3-217ENST00000504663 APELAP0DMC3 54 aa8.18□□□□□ -1.1
TPM3-217ENST00000504663 OR13C7P0DN81 318 aa8.18□□□□□ -1.1
TPM3-217ENST00000504663 C4BPBP20851 252 aa8.18□□□□□ -1.1
TPM3-217ENST00000504663 HTR2BP41595 481 aa8.18□□□□□ -1.1
TPM3-217ENST00000504663 PLGLAQ15195 96 aa8.18□□□□□ -1.1
TPM3-217ENST00000504663 OR8G2PQ6IF36 304 aa8.18□□□□□ -1.1
TPM3-217ENST00000504663 ETV3LQ6ZN32 361 aa8.18□□□□□ -1.1
TPM3-217ENST00000504663 SSMEM1Q8WWF3 244 aa8.18□□□□□ -1.1
TPM3-217ENST00000504663 SH3BGRL3Q9H299 93 aa8.18□□□□□ -1.1
TPM3-217ENST00000504663 HIPK2Q9H2X6 1198 aa8.18□□□□□ -1.1
TPM3-217ENST00000504663 C1RLQ9NZP8 487 aa8.18□□□□□ -1.1
TPM3-217ENST00000504663 F11RQ9Y624 299 aaKnown RBP8.18□□□□□ -1.1
TPM3-217ENST00000504663 NPIPB5A8MRT5 1133 aa8.17□□□□□ -1.1
TPM3-217ENST00000504663 ATP6V0E1O15342 81 aa8.17□□□□□ -1.1
TPM3-217ENST00000504663 OR8U8P0C7N1 319 aa8.17□□□□□ -1.1
TPM3-217ENST00000504663 TPT1P13693 172 aaKnown RBP8.17□□□□□ -1.1
TPM3-217ENST00000504663 ATP6V0CP27449 155 aa8.17□□□□□ -1.1
TPM3-217ENST00000504663 ATP5IP56385 69 aaPredicted RBP8.17□□□□□ -1.1
TPM3-217ENST00000504663 DLK1P80370 383 aa8.17□□□□□ -1.1
TPM3-217ENST00000504663 RUNX1Q01196 453 aa8.17□□□□□ -1.1
TPM3-217ENST00000504663 ALKAL2Q6UX46 152 aa8.17□□□□□ -1.1
TPM3-217ENST00000504663 C16orf82Q7Z2V1 217 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms