RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 TMED7Q9Y3B3 224 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 FIS1Q9Y3D6 152 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 HEBP2Q9Y5Z4 205 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 MED1Q15648 1581 aaPredicted RBP1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 QSER1Q2KHR3 1735 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 PKD1L3Q7Z443 1732 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 MYO5AQ9Y4I1 1855 aaKnown RBP1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 MYH8P13535 1937 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 PLXND1Q9Y4D7 1925 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 TMED7-TICAM2A0A0A6YYA0 188 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 LOC100130705A0A1B0GUX0 176 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 A0A1W2PPK0 400 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 ARRDC5A6NEK1 342 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 TMEM235A6NFC5 223 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 SHISA9B4DS77 424 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 EEF1E1-BLOC1S5C9J1V9 151 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 NDUFC2-KCTD14E9PQ53 114 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 C17orf112F2Z3M2 114 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 F5H5P2 479 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 H0YL77 283 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 H3BRM9 83 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 M0R1B8 84 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 ISLRO14498 428 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 MRPS12O15235 138 aaKnown RBP1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 EEF1E1O43324 174 aaKnown RBP1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 XRCC3O43542 346 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 GSTZ1O43708 216 aaPredicted RBP1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 ENSAO43768 121 aaKnown RBP1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 RAMP1O60894 148 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 PITX3O75364 302 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 C1orf105O95561 183 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 SFT2D2O95562 160 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 ZNF682O95780 498 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 NAPSAO96009 420 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 CYB5AP00167 134 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 C5P01031 1676 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 HSPB1P04792 205 aaKnown RBP1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 FGF1P05230 155 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 OR9G9P0C7N8 305 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 RGPD2P0DJD1 1756 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 PGA3P0DJD8 388 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 BCL2P10415 239 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 PIPP12273 146 aaPredicted RBP1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 IFITM1P13164 125 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 CXCL3P19876 107 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 CRYGSP22914 178 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 GADD45AP24522 165 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 PSMB8P28062 276 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 CCR2P41597 374 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 FABP6P51161 128 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 FOXA1P55317 472 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 RND3P61587 244 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 RPS24P62847 133 aaKnown RBP1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 ZNF92Q03936 586 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 MEF2CQ06413 473 aaPredicted RBP1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 RAB40BQ12829 278 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 PAPPAQ13219 1627 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 PMAIP1Q13794 54 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 KLF5Q13887 457 aaPredicted RBP1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 ENDOGQ14249 297 aaKnown RBP1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 MMDQ15546 238 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 TGIF1Q15583 401 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 OR1C1Q15619 314 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 CD226Q15762 336 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 RRN3P1Q2M238 152 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 ATG2AQ2TAZ0 1938 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 TIGITQ495A1 244 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 PHLDA2Q53GA4 152 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 PYDC2Q56P42 97 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 DMRTC1Q5HYR2 192 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 TTC32Q5I0X7 151 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 PSMG4Q5JS54 123 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 MEIG1Q5JSS6 88 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 IBA57Q5T440 356 aaKnown RBP1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 DCAF12Q5T6F0 453 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 ERCC6L2Q5T890 1561 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 Q6AWC8 147 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 OR4C11Q6IEV9 310 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 OR2T5Q6IEZ7 315 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 RASL11AQ6T310 242 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 EPGNQ6UW88 154 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 LCN15Q6UWW0 184 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 TMEM64Q6YI46 380 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 ZNF730Q6ZMV8 503 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 CLEC20AQ6ZU45 233 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 Q6ZUT4 128 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 H2AFVQ71UI9 128 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 TCF23Q7RTU1 214 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 STRCQ7RTU9 1775 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 ZNF429Q86V71 674 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 C1orf174Q8IYL3 243 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 PRR22Q8IZ63 422 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 SLC22A18ASQ8N1D0 253 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 THAP8Q8NA92 274 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 ZFP62Q8NB50 900 aaPredicted RBP1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 MDS2Q8NDY4 140 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 OR8B12Q8NGG6 310 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 OR2AJ1Q8NGZ0 328 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 OR2T29Q8NH02 315 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 OR10AC1Q8NH08 325 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms