RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 XKRY2A2RUG3 117 aa13.48□□□□□ -0.25
VCAN-204ENST00000502527 PGPEP1LA6NFU8 196 aa13.48□□□□□ -0.25
VCAN-204ENST00000502527 RNASE2P10153 161 aaKnown RBP13.48□□□□□ -0.25
VCAN-204ENST00000502527 GAMTQ14353 236 aa13.48□□□□□ -0.25
VCAN-204ENST00000502527 FAM71F2Q6NXP2 309 aa13.48□□□□□ -0.25
VCAN-204ENST00000502527 C8orf31Q8N9H6 132 aa13.48□□□□□ -0.25
VCAN-204ENST00000502527 OR10X1Q8NGY0 326 aa13.48□□□□□ -0.25
VCAN-204ENST00000502527 C11orf52Q96A22 123 aa13.48□□□□□ -0.25
VCAN-204ENST00000502527 NABP2Q9BQ15 211 aa13.48□□□□□ -0.25
VCAN-204ENST00000502527 C19orf24Q9BVV8 132 aa13.48□□□□□ -0.25
VCAN-204ENST00000502527 TNFRSF13BO14836 293 aaPredicted RBP13.48□□□□□ -0.25
VCAN-204ENST00000502527 FCN3O75636 299 aa13.48□□□□□ -0.25
VCAN-204ENST00000502527 AREGP15514 252 aa13.48□□□□□ -0.25
VCAN-204ENST00000502527 RPL8P62917 257 aaKnown RBP13.48□□□□□ -0.25
VCAN-204ENST00000502527 ERHP84090 104 aaKnown RBP13.48□□□□□ -0.25
VCAN-204ENST00000502527 MIR17HGQ75NE6 70 aa13.48□□□□□ -0.25
VCAN-204ENST00000502527 OR4A5Q8NH83 315 aa13.48□□□□□ -0.25
VCAN-204ENST00000502527 RNASE6Q93091 150 aaKnown RBP13.48□□□□□ -0.25
VCAN-204ENST00000502527 FAM122AQ96E09 287 aa13.48□□□□□ -0.25
VCAN-204ENST00000502527 NDUFA4L2Q9NRX3 87 aa13.48□□□□□ -0.25
VCAN-204ENST00000502527 TMEM167BQ9NRX6 74 aa13.48□□□□□ -0.25
VCAN-204ENST00000502527 ACTL6BO94805 426 aa13.47□□□□□ -0.25
VCAN-204ENST00000502527 USF1P22415 310 aaPredicted RBP13.47□□□□□ -0.25
VCAN-204ENST00000502527 IL3RAP26951 378 aa13.47□□□□□ -0.25
VCAN-204ENST00000502527 PNKDQ8N490 385 aa13.47□□□□□ -0.25
VCAN-204ENST00000502527 LINC00311Q8N616 119 aa13.47□□□□□ -0.25
VCAN-204ENST00000502527 OR4C13Q8NGP0 309 aa13.47□□□□□ -0.25
VCAN-204ENST00000502527 OCC1Q8TAD7 63 aa13.47□□□□□ -0.25
VCAN-204ENST00000502527 VSTM2AQ8TAG5 236 aa13.47□□□□□ -0.25
VCAN-204ENST00000502527 CACNG8Q8WXS5 425 aa13.47□□□□□ -0.25
VCAN-204ENST00000502527 TMEM186Q96B77 213 aa13.47□□□□□ -0.25
VCAN-204ENST00000502527 WFIKKN1Q96NZ8 548 aa13.47□□□□□ -0.25
VCAN-204ENST00000502527 TECRQ9NZ01 308 aaKnown RBP13.47□□□□□ -0.25
VCAN-204ENST00000502527 INS-IGF2F8WCM5 200 aa13.46□□□□□ -0.25
VCAN-204ENST00000502527 CHRNB4P30926 498 aa13.46□□□□□ -0.25
VCAN-204ENST00000502527 OR10J1P30954 320 aa13.46□□□□□ -0.25
VCAN-204ENST00000502527 CD69Q07108 199 aa13.46□□□□□ -0.25
VCAN-204ENST00000502527 LYPD2Q6UXB3 125 aa13.46□□□□□ -0.25
VCAN-204ENST00000502527 MOB3BQ86TA1 216 aa13.46□□□□□ -0.25
VCAN-204ENST00000502527 PDPNQ86YL7 162 aa13.46□□□□□ -0.25
VCAN-204ENST00000502527 OR10W1Q8NGF6 305 aa13.46□□□□□ -0.25
VCAN-204ENST00000502527 ZNF596Q8TC21 504 aa13.46□□□□□ -0.25
VCAN-204ENST00000502527 TMEM37Q8WXS4 190 aa13.46□□□□□ -0.25
VCAN-204ENST00000502527 DYNLRB1Q9NP97 96 aa13.46□□□□□ -0.25
VCAN-204ENST00000502527 CEP250Q9BV73 2442 aa13.46□□□□□ -0.25
VCAN-204ENST00000502527 IGKV1OR2-108A0A075B7D4 117 aa13.46□□□□□ -0.26
VCAN-204ENST00000502527 A0A0U1RQK1 487 aa13.46□□□□□ -0.26
VCAN-204ENST00000502527 ZNF320A2RRD8 509 aa13.46□□□□□ -0.26
VCAN-204ENST00000502527 DLL1O00548 723 aa13.46□□□□□ -0.26
VCAN-204ENST00000502527 HIST1H1BP16401 226 aaKnown RBP13.46□□□□□ -0.26
VCAN-204ENST00000502527 GPX4P36969 197 aaPredicted RBP13.46□□□□□ -0.26
VCAN-204ENST00000502527 REG1BP48304 166 aa13.46□□□□□ -0.26
VCAN-204ENST00000502527 TBR1Q16650 682 aa13.46□□□□□ -0.26
VCAN-204ENST00000502527 OR10G8Q8NGN5 311 aa13.46□□□□□ -0.26
VCAN-204ENST00000502527 SGMS2Q8NHU3 365 aa13.46□□□□□ -0.26
VCAN-204ENST00000502527 TMEM167AQ8TBQ9 72 aa13.46□□□□□ -0.26
VCAN-204ENST00000502527 LY96Q9Y6Y9 160 aa13.46□□□□□ -0.26
VCAN-204ENST00000502527 CUL9Q8IWT3 2517 aa13.46□□□□□ -0.26
VCAN-204ENST00000502527 A0A1W2PN81 502 aa13.45□□□□□ -0.26
VCAN-204ENST00000502527 C9JCJ5 164 aa13.45□□□□□ -0.26
VCAN-204ENST00000502527 DVL1O14640 695 aa13.45□□□□□ -0.26
VCAN-204ENST00000502527 PDLIM4P50479 330 aa13.45□□□□□ -0.26
VCAN-204ENST00000502527 TAS2R45P59539 299 aa13.45□□□□□ -0.26
VCAN-204ENST00000502527 RBPJQ06330 500 aa13.45□□□□□ -0.26
VCAN-204ENST00000502527 PSG5Q15238 335 aa13.45□□□□□ -0.26
VCAN-204ENST00000502527 TEX38Q6PEX7 206 aa13.45□□□□□ -0.26
VCAN-204ENST00000502527 PQLC2Q6ZP29 291 aa13.45□□□□□ -0.26
VCAN-204ENST00000502527 ANKRD11Q6UB99 2663 aaPredicted RBP13.45□□□□□ -0.26
VCAN-204ENST00000502527 SPACA3Q8IXA5 215 aa13.44□□□□□ -0.26
VCAN-204ENST00000502527 KAAG1Q9UBP8 84 aa13.44□□□□□ -0.26
VCAN-204ENST00000502527 WASHC3Q9Y3C0 194 aa13.44□□□□□ -0.26
VCAN-204ENST00000502527 YLPM1P49750 1951 aaKnown RBP13.44□□□□□ -0.26
VCAN-204ENST00000502527 SHISA9B4DS77 424 aa13.44□□□□□ -0.26
VCAN-204ENST00000502527 OR5G3P0C626 314 aa13.44□□□□□ -0.26
VCAN-204ENST00000502527 LOXP28300 417 aaPredicted RBP13.44□□□□□ -0.26
VCAN-204ENST00000502527 RPL15P61313 204 aaKnown RBP13.44□□□□□ -0.26
VCAN-204ENST00000502527 CDPF1Q6NVV7 123 aa13.44□□□□□ -0.26
VCAN-204ENST00000502527 RNASEH2CQ8TDP1 164 aaKnown RBP13.44□□□□□ -0.26
VCAN-204ENST00000502527 ST6GALNAC6Q969X2 333 aa13.44□□□□□ -0.26
VCAN-204ENST00000502527 CTSZQ9UBR2 303 aa13.44□□□□□ -0.26
VCAN-204ENST00000502527 MAP1BP46821 2468 aaKnown RBP13.44□□□□□ -0.26
VCAN-204ENST00000502527 E7EQL1 145 aa13.43□□□□□ -0.26
VCAN-204ENST00000502527 AMBPP02760 352 aa13.43□□□□□ -0.26
VCAN-204ENST00000502527 HNF1AP20823 631 aa13.43□□□□□ -0.26
VCAN-204ENST00000502527 MLANAQ16655 118 aa13.43□□□□□ -0.26
VCAN-204ENST00000502527 OR9G1Q8NH87 305 aa13.43□□□□□ -0.26
VCAN-204ENST00000502527 TRAPPC1Q9Y5R8 145 aa13.43□□□□□ -0.26
VCAN-204ENST00000502527 A0A087X0M5 115 aa13.43□□□□□ -0.26
VCAN-204ENST00000502527 TRAV20A0A0B4J274 112 aa13.43□□□□□ -0.26
VCAN-204ENST00000502527 A0A1B0GX30 115 aa13.43□□□□□ -0.26
VCAN-204ENST00000502527 GATA2P23769 480 aaPredicted RBP13.43□□□□□ -0.26
VCAN-204ENST00000502527 ZNF137PP52743 207 aa13.43□□□□□ -0.26
VCAN-204ENST00000502527 DLX6P56179 175 aa13.43□□□□□ -0.26
VCAN-204ENST00000502527 HLA-DRB5Q30154 266 aa13.43□□□□□ -0.26
VCAN-204ENST00000502527 TMEM155Q4W5P6 130 aa13.43□□□□□ -0.26
VCAN-204ENST00000502527 PRR30Q53SZ7 412 aaPredicted RBP13.43□□□□□ -0.26
VCAN-204ENST00000502527 DMRTC2Q8IXT2 367 aaPredicted RBP13.43□□□□□ -0.26
VCAN-204ENST00000502527 LAMA5O15230 3695 aa13.42□□□□□ -0.26
VCAN-204ENST00000502527 OR7C2O60412 319 aa13.42□□□□□ -0.26
VCAN-204ENST00000502527 MC5RP33032 325 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms