RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 CD3DP04234 171 aa12.1□□□□□ -0.47
VIM-208ENST00000497849 CTXN2P0C2S0 81 aa12.1□□□□□ -0.47
VIM-208ENST00000497849 IGKV1-13P0DP09 117 aa12.1□□□□□ -0.47
VIM-208ENST00000497849 TAS2R19P59542 299 aa12.1□□□□□ -0.47
VIM-208ENST00000497849 FAM106AQ4KMX7 169 aa12.1□□□□□ -0.47
VIM-208ENST00000497849 C10orf55Q5SWW7 151 aa12.1□□□□□ -0.47
VIM-208ENST00000497849 UNQ9165/PRO28630Q6UXU0 137 aa12.1□□□□□ -0.47
VIM-208ENST00000497849 SLC38A6Q8IZM9 456 aa12.1□□□□□ -0.47
VIM-208ENST00000497849 TMEM229BQ8NBD8 167 aa12.1□□□□□ -0.47
VIM-208ENST00000497849 DEDD2Q8WXF8 326 aa12.1□□□□□ -0.47
VIM-208ENST00000497849 ZNF430Q9H8G1 570 aaPredicted RBP12.1□□□□□ -0.47
VIM-208ENST00000497849 IGLL5B9A064 214 aa12.09□□□□□ -0.47
VIM-208ENST00000497849 AKAIN1P0CW23 69 aa12.09□□□□□ -0.47
VIM-208ENST00000497849 FAUP35544 74 aaKnown RBP12.09□□□□□ -0.47
VIM-208ENST00000497849 TRIM16LQ309B1 348 aa12.09□□□□□ -0.47
VIM-208ENST00000497849 VMA21Q3ZAQ7 101 aa12.09□□□□□ -0.47
VIM-208ENST00000497849 ZNF585BQ52M93 769 aa12.09□□□□□ -0.47
VIM-208ENST00000497849 OR4A47Q6IF82 309 aa12.09□□□□□ -0.47
VIM-208ENST00000497849 OR4D10Q8NGI6 311 aa12.09□□□□□ -0.47
VIM-208ENST00000497849 SPIN2AQ99865 258 aa12.09□□□□□ -0.47
VIM-208ENST00000497849 SPAG8Q99932 426 aaPredicted RBP12.09□□□□□ -0.47
VIM-208ENST00000497849 SPIN2BQ9BPZ2 258 aa12.09□□□□□ -0.47
VIM-208ENST00000497849 C11orf68Q9H3H3 251 aaKnown RBP12.09□□□□□ -0.47
VIM-208ENST00000497849 PLA2G2EQ9NZK7 142 aa12.09□□□□□ -0.47
VIM-208ENST00000497849 RBM7Q9Y580 266 aaKnown RBP12.09□□□□□ -0.47
VIM-208ENST00000497849 NAP1L6A6NFF2 107 aa12.08□□□□□ -0.48
VIM-208ENST00000497849 MFAP2P55001 183 aa12.08□□□□□ -0.48
VIM-208ENST00000497849 TAS2R46P59540 309 aa12.08□□□□□ -0.48
VIM-208ENST00000497849 FXYD4P59646 89 aa12.08□□□□□ -0.48
VIM-208ENST00000497849 FAAP20Q6NZ36 180 aa12.08□□□□□ -0.48
VIM-208ENST00000497849 STEAP1BQ6NZ63 245 aa12.08□□□□□ -0.48
VIM-208ENST00000497849 MARC2Q969Z3 335 aa12.08□□□□□ -0.48
VIM-208ENST00000497849 RARRES2Q99969 163 aa12.08□□□□□ -0.48
VIM-208ENST00000497849 OR2D2Q9H210 308 aa12.08□□□□□ -0.48
VIM-208ENST00000497849 HRASLSQ9HDD0 168 aa12.08□□□□□ -0.48
VIM-208ENST00000497849 MRPL27Q9P0M9 148 aaKnown RBP12.08□□□□□ -0.48
VIM-208ENST00000497849 ZNF257Q9Y2Q1 563 aa12.08□□□□□ -0.48
VIM-208ENST00000497849 OR2W1Q9Y3N9 320 aa12.08□□□□□ -0.48
VIM-208ENST00000497849 HMX3A6NHT5 357 aa12.07□□□□□ -0.48
VIM-208ENST00000497849 DIRAS3O95661 229 aa12.07□□□□□ -0.48
VIM-208ENST00000497849 RAB3DO95716 219 aa12.07□□□□□ -0.48
VIM-208ENST00000497849 TBPP20226 339 aa12.07□□□□□ -0.48
VIM-208ENST00000497849 TAGLNQ01995 201 aaKnown RBP12.07□□□□□ -0.48
VIM-208ENST00000497849 CBX3Q13185 183 aa12.07□□□□□ -0.48
VIM-208ENST00000497849 OXA1LQ15070 435 aa12.07□□□□□ -0.48
VIM-208ENST00000497849 RTL8BQ17RB0 113 aa12.07□□□□□ -0.48
VIM-208ENST00000497849 CENPSQ8N2Z9 138 aa12.07□□□□□ -0.48
VIM-208ENST00000497849 ENKURQ8TC29 256 aa12.07□□□□□ -0.48
VIM-208ENST00000497849 GALNT14Q96FL9 552 aa12.07□□□□□ -0.48
VIM-208ENST00000497849 FANCD2OSQ96PS1 177 aa12.07□□□□□ -0.48
VIM-208ENST00000497849 ZNF2Q9BSG1 426 aaPredicted RBP12.07□□□□□ -0.48
VIM-208ENST00000497849 C5orf66Q9H5L9 145 aa12.07□□□□□ -0.48
VIM-208ENST00000497849 CCL28Q9NRJ3 127 aa12.07□□□□□ -0.48
VIM-208ENST00000497849 FAM240BA0A1B0GVZ2 78 aa12.06□□□□□ -0.48
VIM-208ENST00000497849 TEX22C9J3V5 150 aa12.06□□□□□ -0.48
VIM-208ENST00000497849 TSPAN4O14817 238 aa12.06□□□□□ -0.48
VIM-208ENST00000497849 DEFB4AO15263 64 aa12.06□□□□□ -0.48
VIM-208ENST00000497849 CRYZL1O95825 349 aa12.06□□□□□ -0.48
VIM-208ENST00000497849 PPYP01298 95 aa12.06□□□□□ -0.48
VIM-208ENST00000497849 CD74P04233 296 aa12.06□□□□□ -0.48
VIM-208ENST00000497849 RRASP10301 218 aa12.06□□□□□ -0.48
VIM-208ENST00000497849 TSPAN5P62079 268 aa12.06□□□□□ -0.48
VIM-208ENST00000497849 MEF2DQ14814 521 aa12.06□□□□□ -0.48
VIM-208ENST00000497849 RNASE10Q5GAN6 216 aaKnown RBP12.06□□□□□ -0.48
VIM-208ENST00000497849 DHRS11Q6UWP2 260 aa12.06□□□□□ -0.48
VIM-208ENST00000497849 NRARPQ7Z6K4 114 aa12.06□□□□□ -0.48
VIM-208ENST00000497849 ZNF575Q86XF7 245 aa12.06□□□□□ -0.48
VIM-208ENST00000497849 OR4C16Q8NGL9 310 aa12.06□□□□□ -0.48
VIM-208ENST00000497849 OR5B3Q8NH48 314 aa12.06□□□□□ -0.48
VIM-208ENST00000497849 SECTM1Q8WVN6 248 aa12.06□□□□□ -0.48
VIM-208ENST00000497849 GIMAP1Q8WWP7 306 aa12.06□□□□□ -0.48
VIM-208ENST00000497849 GPHA2Q96T91 129 aa12.06□□□□□ -0.48
VIM-208ENST00000497849 MCUBQ9NWR8 336 aa12.06□□□□□ -0.48
VIM-208ENST00000497849 ZNF735P0CB33 412 aa12.05□□□□□ -0.48
VIM-208ENST00000497849 SAA1P0DJI8 122 aaPredicted RBP12.05□□□□□ -0.48
VIM-208ENST00000497849 SLC25A42Q86VD7 318 aa12.05□□□□□ -0.48
VIM-208ENST00000497849 OR6F1Q8NGZ6 308 aa12.05□□□□□ -0.48
VIM-208ENST00000497849 OR11H2Q8NH07 326 aa12.05□□□□□ -0.48
VIM-208ENST00000497849 SLC5A7Q9GZV3 580 aa12.05□□□□□ -0.48
VIM-208ENST00000497849 LINC00473A8K010 186 aa12.04□□□□□ -0.48
VIM-208ENST00000497849 NPIPB5A8MRT5 1133 aa12.04□□□□□ -0.48
VIM-208ENST00000497849 DISC1C4P0D8 188 aa12.04□□□□□ -0.48
VIM-208ENST00000497849 E7EUB6 86 aa12.04□□□□□ -0.48
VIM-208ENST00000497849 ACTL6BO94805 426 aa12.04□□□□□ -0.48
VIM-208ENST00000497849 IGLV2-14P01704 120 aa12.04□□□□□ -0.48
VIM-208ENST00000497849 IL6RP08887 468 aaPredicted RBP12.04□□□□□ -0.48
VIM-208ENST00000497849 BTCP35070 178 aa12.04□□□□□ -0.48
VIM-208ENST00000497849 HERV-K104P61576 105 aa12.04□□□□□ -0.48
VIM-208ENST00000497849 KLK9Q2XQG4 91 aa12.04□□□□□ -0.48
VIM-208ENST00000497849 TMEM17Q86X19 198 aa12.04□□□□□ -0.48
VIM-208ENST00000497849 MMD2Q8IY49 270 aa12.04□□□□□ -0.48
VIM-208ENST00000497849 OSR1Q8TAX0 266 aaPredicted RBP12.04□□□□□ -0.48
VIM-208ENST00000497849 EEF1AKMT3Q96AZ1 226 aa12.04□□□□□ -0.48
VIM-208ENST00000497849 FXYD6Q9H0Q3 95 aa12.04□□□□□ -0.48
VIM-208ENST00000497849 CSTL1Q9H114 145 aa12.04□□□□□ -0.48
VIM-208ENST00000497849 KLK9Q9UKQ9 250 aa12.04□□□□□ -0.48
VIM-208ENST00000497849 LRP1BQ9NZR2 4599 aa12.04□□□□□ -0.48
VIM-208ENST00000497849 A0A1B0GW64 132 aa12.03□□□□□ -0.48
VIM-208ENST00000497849 MPTX1A8MV57 137 aa12.03□□□□□ -0.48
VIM-208ENST00000497849 CLEC3BP05452 202 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms