RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 WDR61Q9GZS3 305 aaKnown RBP0.89□□□□□ -2.27
PSPC1-205ENST00000497722 LHFPL6Q9Y693 200 aa0.89□□□□□ -2.27
PSPC1-205ENST00000497722 TONSLQ96HA7 1378 aa0.88□□□□□ -2.27
PSPC1-205ENST00000497722 KCNK1O00180 336 aa0.88□□□□□ -2.27
PSPC1-205ENST00000497722 HIST1H2BOP23527 126 aa0.88□□□□□ -2.27
PSPC1-205ENST00000497722 BRS3P32247 399 aa0.88□□□□□ -2.27
PSPC1-205ENST00000497722 HIST1H2BBP33778 126 aa0.88□□□□□ -2.27
PSPC1-205ENST00000497722 HIST1H2BDP58876 126 aa0.88□□□□□ -2.27
PSPC1-205ENST00000497722 KRTAP10-4P60372 401 aaPredicted RBP0.88□□□□□ -2.27
PSPC1-205ENST00000497722 HIST1H2BCP62807 126 aa0.88□□□□□ -2.27
PSPC1-205ENST00000497722 HBA1P69905 142 aa0.88□□□□□ -2.27
PSPC1-205ENST00000497722 GUK1Q16774 197 aa0.88□□□□□ -2.27
PSPC1-205ENST00000497722 HIST2H2BEQ16778 126 aa0.88□□□□□ -2.27
PSPC1-205ENST00000497722 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.88□□□□□ -2.27
PSPC1-205ENST00000497722 CCDC122Q5T0U0 273 aa0.88□□□□□ -2.27
PSPC1-205ENST00000497722 LPCAT3Q6P1A2 487 aa0.88□□□□□ -2.27
PSPC1-205ENST00000497722 RPL22L1Q6P5R6 122 aaKnown RBP0.88□□□□□ -2.27
PSPC1-205ENST00000497722 LCN15Q6UWW0 184 aa0.88□□□□□ -2.27
PSPC1-205ENST00000497722 Q6ZS49 121 aa0.88□□□□□ -2.27
PSPC1-205ENST00000497722 Q8N2B8 174 aa0.88□□□□□ -2.27
PSPC1-205ENST00000497722 ZNF565Q8N9K5 539 aa0.88□□□□□ -2.27
PSPC1-205ENST00000497722 RASSF5Q8WWW0 418 aa0.88□□□□□ -2.27
PSPC1-205ENST00000497722 AQP3Q92482 292 aa0.88□□□□□ -2.27
PSPC1-205ENST00000497722 HIST1H2BHQ93079 126 aa0.88□□□□□ -2.27
PSPC1-205ENST00000497722 HIST1H2BNQ99877 126 aa0.88□□□□□ -2.27
PSPC1-205ENST00000497722 HIST1H2BMQ99879 126 aa0.88□□□□□ -2.27
PSPC1-205ENST00000497722 MALRD1Q5VYJ5 2156 aa0.88□□□□□ -2.27
PSPC1-205ENST00000497722 C9orf84Q5VXU9 1444 aa0.88□□□□□ -2.27
PSPC1-205ENST00000497722 SMIM23A6NLE4 172 aa0.87□□□□□ -2.27
PSPC1-205ENST00000497722 PSMD12O00232 456 aaPredicted RBP0.87□□□□□ -2.27
PSPC1-205ENST00000497722 HTR1AP08908 422 aa0.87□□□□□ -2.27
PSPC1-205ENST00000497722 UBE2IP63279 158 aaKnown RBP0.87□□□□□ -2.27
PSPC1-205ENST00000497722 CCL20P78556 96 aa0.87□□□□□ -2.27
PSPC1-205ENST00000497722 PMAIP1Q13794 54 aa0.87□□□□□ -2.27
PSPC1-205ENST00000497722 KCNJ8Q15842 424 aa0.87□□□□□ -2.27
PSPC1-205ENST00000497722 KHDC3LQ587J8 217 aa0.87□□□□□ -2.27
PSPC1-205ENST00000497722 SPANXN3Q5MJ09 141 aa0.87□□□□□ -2.27
PSPC1-205ENST00000497722 TEX36Q5VZQ5 186 aa0.87□□□□□ -2.27
PSPC1-205ENST00000497722 CD200R1LQ6Q8B3 271 aa0.87□□□□□ -2.27
PSPC1-205ENST00000497722 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.87□□□□□ -2.27
PSPC1-205ENST00000497722 CLVS1Q8IUQ0 354 aaPredicted RBP0.87□□□□□ -2.27
PSPC1-205ENST00000497722 C9orf163Q8N9P6 203 aa0.87□□□□□ -2.27
PSPC1-205ENST00000497722 ZNF439Q8NDP4 499 aa0.87□□□□□ -2.27
PSPC1-205ENST00000497722 OR4E2Q8NGC2 313 aa0.87□□□□□ -2.27
PSPC1-205ENST00000497722 OR4D11Q8NGI4 311 aa0.87□□□□□ -2.27
PSPC1-205ENST00000497722 XPNPEP1Q9NQW7 623 aa0.87□□□□□ -2.27
PSPC1-205ENST00000497722 CISHQ9NSE2 258 aa0.87□□□□□ -2.27
PSPC1-205ENST00000497722 DCCP43146 1447 aa0.87□□□□□ -2.27
PSPC1-205ENST00000497722 INTS1Q8N201 2190 aaKnown RBP0.86□□□□□ -2.27
PSPC1-205ENST00000497722 BAZ2BQ9UIF8 2168 aaKnown RBP0.86□□□□□ -2.27
PSPC1-205ENST00000497722 TRBV6-7A0A0A0MS04 114 aa0.86□□□□□ -2.27
PSPC1-205ENST00000497722 A0A0D9SG52 128 aa0.86□□□□□ -2.27
PSPC1-205ENST00000497722 EEF1E1-BLOC1S5C9J1V9 151 aa0.86□□□□□ -2.27
PSPC1-205ENST00000497722 INMT-MINDY4F8WBC2 141 aa0.86□□□□□ -2.27
PSPC1-205ENST00000497722 HCRTO43612 131 aa0.86□□□□□ -2.27
PSPC1-205ENST00000497722 ASAH2BP0C7U1 165 aa0.86□□□□□ -2.27
PSPC1-205ENST00000497722 CD79AP11912 226 aa0.86□□□□□ -2.27
PSPC1-205ENST00000497722 MAGOHP61326 146 aaKnown RBP0.86□□□□□ -2.27
PSPC1-205ENST00000497722 SYPL2Q5VXT5 272 aa0.86□□□□□ -2.27
PSPC1-205ENST00000497722 C8orf74Q6P047 294 aa0.86□□□□□ -2.27
PSPC1-205ENST00000497722 PHF13Q86YI8 300 aaPredicted RBP0.86□□□□□ -2.27
PSPC1-205ENST00000497722 OR4C6Q8NH72 309 aa0.86□□□□□ -2.27
PSPC1-205ENST00000497722 MRPL30Q8TCC3 161 aaKnown RBP0.86□□□□□ -2.27
PSPC1-205ENST00000497722 SLC50A1Q9BRV3 221 aa0.86□□□□□ -2.27
PSPC1-205ENST00000497722 DERL1Q9BUN8 251 aa0.86□□□□□ -2.27
PSPC1-205ENST00000497722 TMEM147Q9BVK8 224 aa0.86□□□□□ -2.27
PSPC1-205ENST00000497722 ULBP3Q9BZM4 244 aa0.86□□□□□ -2.27
PSPC1-205ENST00000497722 PRTFDC1Q9NRG1 225 aa0.86□□□□□ -2.27
PSPC1-205ENST00000497722 SLC39A9Q9NUM3 307 aa0.86□□□□□ -2.27
PSPC1-205ENST00000497722 NOSIPQ9Y314 301 aaKnown RBP0.86□□□□□ -2.27
PSPC1-205ENST00000497722 HEATR5BQ9P2D3 2071 aa0.85□□□□□ -2.27
PSPC1-205ENST00000497722 AHNAK2Q8IVF2 5795 aa0.85□□□□□ -2.27
PSPC1-205ENST00000497722 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.85□□□□□ -2.27
PSPC1-205ENST00000497722 A0A087WX48 190 aa0.85□□□□□ -2.27
PSPC1-205ENST00000497722 PQLC2LA1A4F0 135 aa0.85□□□□□ -2.27
PSPC1-205ENST00000497722 TGOLN2O43493 480 aa0.85□□□□□ -2.27
PSPC1-205ENST00000497722 CRYZL1O95825 349 aa0.85□□□□□ -2.27
PSPC1-205ENST00000497722 GLI3P10071 1580 aa0.85□□□□□ -2.27
PSPC1-205ENST00000497722 ZNF80P51504 273 aaPredicted RBP0.85□□□□□ -2.27
PSPC1-205ENST00000497722 SPCS3P61009 180 aa0.85□□□□□ -2.27
PSPC1-205ENST00000497722 RAB5BP61020 215 aa0.85□□□□□ -2.27
PSPC1-205ENST00000497722 PSME3P61289 254 aa0.85□□□□□ -2.27
PSPC1-205ENST00000497722 ZNF846Q147U1 533 aa0.85□□□□□ -2.27
PSPC1-205ENST00000497722 SPANXN5Q5MJ07 72 aa0.85□□□□□ -2.27
PSPC1-205ENST00000497722 SPOPLQ6IQ16 392 aa0.85□□□□□ -2.27
PSPC1-205ENST00000497722 C1orf158Q8N1D5 194 aa0.85□□□□□ -2.27
PSPC1-205ENST00000497722 FAM19A2Q8N3H0 131 aa0.85□□□□□ -2.27
PSPC1-205ENST00000497722 ANKRD29Q8N6D5 301 aa0.85□□□□□ -2.27
PSPC1-205ENST00000497722 KLK6Q92876 244 aa0.85□□□□□ -2.27
PSPC1-205ENST00000497722 PTH2Q96A98 100 aa0.85□□□□□ -2.27
PSPC1-205ENST00000497722 KLK9Q9UKQ9 250 aa0.85□□□□□ -2.27
PSPC1-205ENST00000497722 C22orf24Q9Y442 160 aa0.85□□□□□ -2.27
PSPC1-205ENST00000497722 ARFGEF3Q5TH69 2177 aa0.84□□□□□ -2.27
PSPC1-205ENST00000497722 TRAV9-1A0A075B6T8 112 aa0.84□□□□□ -2.27
PSPC1-205ENST00000497722 FADS1O60427 444 aa0.84□□□□□ -2.27
PSPC1-205ENST00000497722 IFNA10P01566 189 aa0.84□□□□□ -2.27
PSPC1-205ENST00000497722 HLA-DRB1P01911 266 aa0.84□□□□□ -2.27
PSPC1-205ENST00000497722 OR5G3P0C626 314 aa0.84□□□□□ -2.27
PSPC1-205ENST00000497722 SPI1P17947 270 aa0.84□□□□□ -2.27
PSPC1-205ENST00000497722 FKBP2P26885 142 aaKnown RBP0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms