RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 PYCARDQ9ULZ3 195 aa2.57□□□□□ -2
EXOSC3-208ENST00000496910 WASHC3Q9Y3C0 194 aa2.57□□□□□ -2
EXOSC3-208ENST00000496910 RFNGQ9Y644 331 aa2.57□□□□□ -2
EXOSC3-208ENST00000496910 SCN8AQ9UQD0 1980 aa2.57□□□□□ -2
EXOSC3-208ENST00000496910 KIAA1549LQ6ZVL6 1849 aa2.56□□□□□ -2
EXOSC3-208ENST00000496910 TP53BP1Q12888 1972 aaPredicted RBP2.56□□□□□ -2
EXOSC3-208ENST00000496910 SCN2AQ99250 2005 aa2.56□□□□□ -2
EXOSC3-208ENST00000496910 UNC13CQ8NB66 2214 aa2.56□□□□□ -2
EXOSC3-208ENST00000496910 HMCN2Q8NDA2 5059 aa2.56□□□□□ -2
EXOSC3-208ENST00000496910 TMED7-TICAM2A0A0A6YYA0 188 aa2.56□□□□□ -2
EXOSC3-208ENST00000496910 TRAV19A0A0A6YYK7 116 aa2.56□□□□□ -2
EXOSC3-208ENST00000496910 TRAV26-2A0A0B4J265 109 aa2.56□□□□□ -2
EXOSC3-208ENST00000496910 TLCD2A6NGC4 264 aa2.56□□□□□ -2
EXOSC3-208ENST00000496910 CD300LBA8K4G0 201 aa2.56□□□□□ -2
EXOSC3-208ENST00000496910 C3orf84H3BNL1 204 aa2.56□□□□□ -2
EXOSC3-208ENST00000496910 C19orf84I3L1E1 186 aa2.56□□□□□ -2
EXOSC3-208ENST00000496910 ORC5O43913 435 aa2.56□□□□□ -2
EXOSC3-208ENST00000496910 COX7A2P2O60397 106 aa2.56□□□□□ -2
EXOSC3-208ENST00000496910 ZNF354AO60765 605 aaPredicted RBP2.56□□□□□ -2
EXOSC3-208ENST00000496910 SRSF10O75494 262 aaKnown RBP2.56□□□□□ -2
EXOSC3-208ENST00000496910 IGHG2P01859 326 aa2.56□□□□□ -2
EXOSC3-208ENST00000496910 FBP1P09467 338 aa2.56□□□□□ -2
EXOSC3-208ENST00000496910 GIG44P09565 113 aaPredicted RBP2.56□□□□□ -2
EXOSC3-208ENST00000496910 IFI30P13284 250 aa2.56□□□□□ -2
EXOSC3-208ENST00000496910 CTSEP14091 401 aa2.56□□□□□ -2
EXOSC3-208ENST00000496910 S100A7P31151 101 aa2.56□□□□□ -2
EXOSC3-208ENST00000496910 PSMB3P49720 205 aa2.56□□□□□ -2
EXOSC3-208ENST00000496910 RPS20P60866 119 aaKnown RBP2.56□□□□□ -2
EXOSC3-208ENST00000496910 AP1S1P61966 158 aa2.56□□□□□ -2
EXOSC3-208ENST00000496910 KCNJ8Q15842 424 aa2.56□□□□□ -2
EXOSC3-208ENST00000496910 TMEM183BQ1AE95 376 aa2.56□□□□□ -2
EXOSC3-208ENST00000496910 TMEM128Q5BJH2 165 aa2.56□□□□□ -2
EXOSC3-208ENST00000496910 FAAP20Q6NZ36 180 aa2.56□□□□□ -2
EXOSC3-208ENST00000496910 SBSNQ6UWP8 590 aa2.56□□□□□ -2
EXOSC3-208ENST00000496910 IL34Q6ZMJ4 242 aa2.56□□□□□ -2
EXOSC3-208ENST00000496910 GOLT1AQ6ZVE7 132 aa2.56□□□□□ -2
EXOSC3-208ENST00000496910 ZBTB8OSQ8IWT0 167 aa2.56□□□□□ -2
EXOSC3-208ENST00000496910 TMEM183AQ8IXX5 376 aa2.56□□□□□ -2
EXOSC3-208ENST00000496910 ZNF440Q8IYI8 595 aa2.56□□□□□ -2
EXOSC3-208ENST00000496910 CEND1Q8N111 149 aa2.56□□□□□ -2
EXOSC3-208ENST00000496910 LRRC18Q8N456 261 aa2.56□□□□□ -2
EXOSC3-208ENST00000496910 ZNF561Q8N587 486 aa2.56□□□□□ -2
EXOSC3-208ENST00000496910 C20orf203Q8NBC4 194 aa2.56□□□□□ -2
EXOSC3-208ENST00000496910 LY6G5BQ8NDX9 201 aa2.56□□□□□ -2
EXOSC3-208ENST00000496910 KLHL30-AS1Q8NEE0 82 aa2.56□□□□□ -2
EXOSC3-208ENST00000496910 ZNF555Q8NEP9 628 aa2.56□□□□□ -2
EXOSC3-208ENST00000496910 OR2M3Q8NG83 312 aa2.56□□□□□ -2
EXOSC3-208ENST00000496910 OR11H6Q8NGC7 330 aa2.56□□□□□ -2
EXOSC3-208ENST00000496910 OR8B12Q8NGG6 310 aa2.56□□□□□ -2
EXOSC3-208ENST00000496910 OR10G4Q8NGN3 311 aa2.56□□□□□ -2
EXOSC3-208ENST00000496910 ORAOV1Q8WV07 137 aa2.56□□□□□ -2
EXOSC3-208ENST00000496910 APOBEC3DQ96AK3 386 aaPredicted RBP2.56□□□□□ -2
EXOSC3-208ENST00000496910 THTPAQ9BU02 230 aa2.56□□□□□ -2
EXOSC3-208ENST00000496910 MS4A8Q9BY19 250 aa2.56□□□□□ -2
EXOSC3-208ENST00000496910 ALX4Q9H161 411 aaPredicted RBP2.56□□□□□ -2
EXOSC3-208ENST00000496910 OR52D1Q9H346 318 aa2.56□□□□□ -2
EXOSC3-208ENST00000496910 TMEM138Q9NPI0 162 aa2.56□□□□□ -2
EXOSC3-208ENST00000496910 MED29Q9NX70 200 aa2.56□□□□□ -2
EXOSC3-208ENST00000496910 RSL24D1Q9UHA3 163 aaKnown RBP2.56□□□□□ -2
EXOSC3-208ENST00000496910 HSPB11Q9Y547 144 aa2.56□□□□□ -2
EXOSC3-208ENST00000496910 PCYT1BQ9Y5K3 369 aaPredicted RBP2.56□□□□□ -2
EXOSC3-208ENST00000496910 PXMP4Q9Y6I8 212 aa2.56□□□□□ -2
EXOSC3-208ENST00000496910 KIF20BQ96Q89 1820 aa2.56□□□□□ -2
EXOSC3-208ENST00000496910 OBSL1O75147 1896 aa2.56□□□□□ -2
EXOSC3-208ENST00000496910 PIKFYVEQ9Y2I7 2098 aa2.56□□□□□ -2
EXOSC3-208ENST00000496910 IGKV3D-15A0A087WSY6 115 aa2.55□□□□□ -2
EXOSC3-208ENST00000496910 LOC102724200A0A096LPH7 203 aaPredicted RBP2.55□□□□□ -2
EXOSC3-208ENST00000496910 A0A0X1KG70 313 aa2.55□□□□□ -2
EXOSC3-208ENST00000496910 A0A1W2PNU3 283 aaPredicted RBP2.55□□□□□ -2
EXOSC3-208ENST00000496910 A0A1W2PRE2 83 aa2.55□□□□□ -2
EXOSC3-208ENST00000496910 TMEM72A0PK05 275 aa2.55□□□□□ -2
EXOSC3-208ENST00000496910 TRAPPC13A5PLN9 417 aa2.55□□□□□ -2
EXOSC3-208ENST00000496910 MAP1LC3B2A6NCE7 125 aa2.55□□□□□ -2
EXOSC3-208ENST00000496910 SRRM5B3KS81 715 aa2.55□□□□□ -2
EXOSC3-208ENST00000496910 C4orf51C9J302 202 aa2.55□□□□□ -2
EXOSC3-208ENST00000496910 K7EPK0 472 aa2.55□□□□□ -2
EXOSC3-208ENST00000496910 MRASO14807 208 aa2.55□□□□□ -2
EXOSC3-208ENST00000496910 OR10J4P0C629 311 aa2.55□□□□□ -2
EXOSC3-208ENST00000496910 OR12D1P0DN82 309 aa2.55□□□□□ -2
EXOSC3-208ENST00000496910 CRISP2P16562 243 aa2.55□□□□□ -2
EXOSC3-208ENST00000496910 S100A1P23297 94 aa2.55□□□□□ -2
EXOSC3-208ENST00000496910 IMPA1P29218 277 aa2.55□□□□□ -2
EXOSC3-208ENST00000496910 HSPA9P38646 679 aaKnown RBP2.55□□□□□ -2
EXOSC3-208ENST00000496910 YLPM1P49750 1951 aaKnown RBP2.55□□□□□ -2
EXOSC3-208ENST00000496910 HCFC1P51610 2035 aa2.55□□□□□ -2
EXOSC3-208ENST00000496910 CRISP3P54108 245 aa2.55□□□□□ -2
EXOSC3-208ENST00000496910 TPI1P60174 286 aa2.55□□□□□ -2
EXOSC3-208ENST00000496910 PPP1CAP62136 330 aa2.55□□□□□ -2
EXOSC3-208ENST00000496910 SNRPD2P62316 118 aaKnown RBP2.55□□□□□ -2
EXOSC3-208ENST00000496910 HERVK_113P63121 156 aa2.55□□□□□ -2
EXOSC3-208ENST00000496910 GNG5P63218 68 aa2.55□□□□□ -2
EXOSC3-208ENST00000496910 IL15RAQ13261 267 aa2.55□□□□□ -2
EXOSC3-208ENST00000496910 BTN1A1Q13410 526 aa2.55□□□□□ -2
EXOSC3-208ENST00000496910 TMEM241Q24JQ0 296 aa2.55□□□□□ -2
EXOSC3-208ENST00000496910 DCUN1D2Q6PH85 259 aa2.55□□□□□ -2
EXOSC3-208ENST00000496910 UNQ9165/PRO28630Q6UXU0 137 aa2.55□□□□□ -2
EXOSC3-208ENST00000496910 C20orf196Q8IYI0 205 aa2.55□□□□□ -2
EXOSC3-208ENST00000496910 NATD1Q8N6N6 113 aa2.55□□□□□ -2
EXOSC3-208ENST00000496910 LINC01555Q8NAE3 123 aa2.55□□□□□ -2
EXOSC3-208ENST00000496910 ZNF439Q8NDP4 499 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms