RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 DPM3Q9P2X0 92 aa4.96□□□□□ -1.62
VIM-207ENST00000495528 GNG12Q9UBI6 72 aa4.96□□□□□ -1.62
VIM-207ENST00000495528 ZNF107Q9UII5 783 aaPredicted RBP4.96□□□□□ -1.62
VIM-207ENST00000495528 TBC1D24Q9ULP9 559 aa4.96□□□□□ -1.62
VIM-207ENST00000495528 TMED3Q9Y3Q3 217 aa4.96□□□□□ -1.62
VIM-207ENST00000495528 BIRC6Q9NR09 4857 aa4.96□□□□□ -1.62
VIM-207ENST00000495528 FAM240BA0A1B0GVZ2 78 aa4.95□□□□□ -1.62
VIM-207ENST00000495528 A0A1W2PN81 502 aa4.95□□□□□ -1.62
VIM-207ENST00000495528 NAP1L6A6NFF2 107 aa4.95□□□□□ -1.62
VIM-207ENST00000495528 OR5H14A6NHG9 310 aa4.95□□□□□ -1.62
VIM-207ENST00000495528 C3orf84H3BNL1 204 aa4.95□□□□□ -1.62
VIM-207ENST00000495528 LY6LH3BQJ8 138 aa4.95□□□□□ -1.62
VIM-207ENST00000495528 SLC31A2O15432 143 aa4.95□□□□□ -1.62
VIM-207ENST00000495528 DIRAS3O95661 229 aa4.95□□□□□ -1.62
VIM-207ENST00000495528 IGLV1-47P01700 117 aa4.95□□□□□ -1.62
VIM-207ENST00000495528 PGAM2P15259 253 aa4.95□□□□□ -1.62
VIM-207ENST00000495528 SPNP16150 400 aa4.95□□□□□ -1.62
VIM-207ENST00000495528 TBPP20226 339 aa4.95□□□□□ -1.62
VIM-207ENST00000495528 CHRNA7P36544 502 aa4.95□□□□□ -1.62
VIM-207ENST00000495528 LUMP51884 338 aaPredicted RBP4.95□□□□□ -1.62
VIM-207ENST00000495528 PRRX1P54821 245 aa4.95□□□□□ -1.62
VIM-207ENST00000495528 DEFA1P59665 94 aa4.95□□□□□ -1.62
VIM-207ENST00000495528 DEFA3P59666 94 aa4.95□□□□□ -1.62
VIM-207ENST00000495528 HERV-K104P61576 105 aa4.95□□□□□ -1.62
VIM-207ENST00000495528 ASAH1Q13510 395 aa4.95□□□□□ -1.62
VIM-207ENST00000495528 MRGPRG-AS1Q2M3A8 158 aa4.95□□□□□ -1.62
VIM-207ENST00000495528 VWC2Q2TAL6 325 aa4.95□□□□□ -1.62
VIM-207ENST00000495528 TMEM30BQ3MIR4 351 aa4.95□□□□□ -1.62
VIM-207ENST00000495528 CT45A1Q5HYN5 189 aa4.95□□□□□ -1.62
VIM-207ENST00000495528 H1FOOQ8IZA3 346 aaPredicted RBP4.95□□□□□ -1.62
VIM-207ENST00000495528 CT45A3Q8NHU0 189 aa4.95□□□□□ -1.62
VIM-207ENST00000495528 ZNF596Q8TC21 504 aa4.95□□□□□ -1.62
VIM-207ENST00000495528 MARCH1Q8TCQ1 289 aa4.95□□□□□ -1.62
VIM-207ENST00000495528 ABHD14BQ96IU4 210 aa4.95□□□□□ -1.62
VIM-207ENST00000495528 PRAC1Q96KF2 57 aa4.95□□□□□ -1.62
VIM-207ENST00000495528 NOL4LQ96MY1 436 aaPredicted RBP4.95□□□□□ -1.62
VIM-207ENST00000495528 P2RX4Q99571 388 aa4.95□□□□□ -1.62
VIM-207ENST00000495528 C7orf50Q9BRJ6 194 aaKnown RBP4.95□□□□□ -1.62
VIM-207ENST00000495528 CABLES2Q9BTV7 478 aa4.95□□□□□ -1.62
VIM-207ENST00000495528 SLC5A7Q9GZV3 580 aa4.95□□□□□ -1.62
VIM-207ENST00000495528 CCL28Q9NRJ3 127 aa4.95□□□□□ -1.62
VIM-207ENST00000495528 LINC00527Q9UJ94 153 aa4.95□□□□□ -1.62
VIM-207ENST00000495528 SCP2D1Q9UJQ7 156 aa4.95□□□□□ -1.62
VIM-207ENST00000495528 PSG11Q9UQ72 335 aa4.95□□□□□ -1.62
VIM-207ENST00000495528 IGKV1D-13A0A0B4J2D9 117 aa4.94□□□□□ -1.62
VIM-207ENST00000495528 LEUTXA8MZ59 168 aa4.94□□□□□ -1.62
VIM-207ENST00000495528 BUB1B-PAK6H3BSN5 160 aa4.94□□□□□ -1.62
VIM-207ENST00000495528 HSD17B6O14756 317 aa4.94□□□□□ -1.62
VIM-207ENST00000495528 RAMP3O60896 148 aa4.94□□□□□ -1.62
VIM-207ENST00000495528 PPYP01298 95 aa4.94□□□□□ -1.62
VIM-207ENST00000495528 IGKV1-13P0DP09 117 aa4.94□□□□□ -1.62
VIM-207ENST00000495528 HLA-DRB5Q30154 266 aa4.94□□□□□ -1.62
VIM-207ENST00000495528 TPTE2P1Q5T6R2 138 aa4.94□□□□□ -1.62
VIM-207ENST00000495528 AADACL3Q5VUY0 350 aa4.94□□□□□ -1.62
VIM-207ENST00000495528 ZNF660Q6AZW8 331 aaPredicted RBP4.94□□□□□ -1.62
VIM-207ENST00000495528 IDO2Q6ZQW0 420 aa4.94□□□□□ -1.62
VIM-207ENST00000495528 NRARPQ7Z6K4 114 aa4.94□□□□□ -1.62
VIM-207ENST00000495528 ARRDC1Q8N5I2 433 aa4.94□□□□□ -1.62
VIM-207ENST00000495528 KLHL30-AS1Q8NEE0 82 aa4.94□□□□□ -1.62
VIM-207ENST00000495528 PHLDA1Q8WV24 401 aaPredicted RBP4.94□□□□□ -1.62
VIM-207ENST00000495528 TMEM190Q8WZ59 177 aa4.94□□□□□ -1.62
VIM-207ENST00000495528 TOMM40LQ969M1 308 aa4.94□□□□□ -1.62
VIM-207ENST00000495528 PRRT1Q99946 306 aa4.94□□□□□ -1.62
VIM-207ENST00000495528 TOLLIPQ9H0E2 274 aa4.94□□□□□ -1.62
VIM-207ENST00000495528 ZMAT5Q9UDW3 170 aaKnown RBP4.94□□□□□ -1.62
VIM-207ENST00000495528 ZNF221Q9UK13 617 aa4.94□□□□□ -1.62
VIM-207ENST00000495528 JPT1Q9UK76 154 aa4.94□□□□□ -1.62
VIM-207ENST00000495528 FLVCR2Q9UPI3 526 aa4.94□□□□□ -1.62
VIM-207ENST00000495528 TENM2Q9NT68 2774 aa4.93□□□□□ -1.62
VIM-207ENST00000495528 TRAV6A0A075B6T7 132 aa4.93□□□□□ -1.62
VIM-207ENST00000495528 M0QZK8 103 aa4.93□□□□□ -1.62
VIM-207ENST00000495528 UBE2CO00762 179 aa4.93□□□□□ -1.62
VIM-207ENST00000495528 TCRBP04435 133 aa4.93□□□□□ -1.62
VIM-207ENST00000495528 RLN1P04808 185 aa4.93□□□□□ -1.62
VIM-207ENST00000495528 CD34P28906 385 aa4.93□□□□□ -1.62
VIM-207ENST00000495528 GNRHRP30968 328 aa4.93□□□□□ -1.62
VIM-207ENST00000495528 BTCP35070 178 aa4.93□□□□□ -1.62
VIM-207ENST00000495528 ARHGDIBP52566 201 aa4.93□□□□□ -1.62
VIM-207ENST00000495528 RAB25P57735 213 aa4.93□□□□□ -1.62
VIM-207ENST00000495528 LY6G6FQ5SQ64 297 aa4.93□□□□□ -1.62
VIM-207ENST00000495528 CASC10Q5T4H9 136 aa4.93□□□□□ -1.62
VIM-207ENST00000495528 LPCAT3Q6P1A2 487 aa4.93□□□□□ -1.62
VIM-207ENST00000495528 SLC25A48Q6ZT89 311 aaKnown RBP4.93□□□□□ -1.62
VIM-207ENST00000495528 LHFPL1Q86WI0 220 aa4.93□□□□□ -1.62
VIM-207ENST00000495528 ZNF695Q8IW36 515 aa4.93□□□□□ -1.62
VIM-207ENST00000495528 THAP8Q8NA92 274 aa4.93□□□□□ -1.62
VIM-207ENST00000495528 ADAD2Q8NCV1 583 aaKnown RBP4.93□□□□□ -1.62
VIM-207ENST00000495528 ZNF439Q8NDP4 499 aa4.93□□□□□ -1.62
VIM-207ENST00000495528 DUSP18Q8NEJ0 188 aa4.93□□□□□ -1.62
VIM-207ENST00000495528 OR13C8Q8NGS7 320 aa4.93□□□□□ -1.62
VIM-207ENST00000495528 OR10X1Q8NGY0 326 aa4.93□□□□□ -1.62
VIM-207ENST00000495528 OR9G1Q8NH87 305 aa4.93□□□□□ -1.62
VIM-207ENST00000495528 ENKURQ8TC29 256 aa4.93□□□□□ -1.62
VIM-207ENST00000495528 ZFAND1Q8TCF1 268 aa4.93□□□□□ -1.62
VIM-207ENST00000495528 DEDD2Q8WXF8 326 aa4.93□□□□□ -1.62
VIM-207ENST00000495528 MRGPRFQ96AM1 343 aa4.93□□□□□ -1.62
VIM-207ENST00000495528 MOB3AQ96BX8 217 aa4.93□□□□□ -1.62
VIM-207ENST00000495528 SCGB3A2Q96PL1 93 aa4.93□□□□□ -1.62
VIM-207ENST00000495528 RTBDNQ9BSG5 229 aaPredicted RBP4.93□□□□□ -1.62
VIM-207ENST00000495528 PALMDQ9NP74 551 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms