RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 TRIB1Q96RU8 372 aa3.94□□□□□ -1.78
PRKD3-210ENST00000494667 ZNF747Q9BV97 191 aa3.94□□□□□ -1.78
PRKD3-210ENST00000494667 ERRFI1Q9UJM3 462 aaPredicted RBP3.94□□□□□ -1.78
PRKD3-210ENST00000494667 CYSLTR1Q9Y271 337 aa3.94□□□□□ -1.78
PRKD3-210ENST00000494667 KLF12Q9Y4X4 402 aa3.94□□□□□ -1.78
PRKD3-210ENST00000494667 EP400Q96L91 3159 aa3.94□□□□□ -1.78
PRKD3-210ENST00000494667 ZG16O60844 167 aa3.94□□□□□ -1.78
PRKD3-210ENST00000494667 BRWD1-AS2P59051 145 aa3.94□□□□□ -1.78
PRKD3-210ENST00000494667 HBBP68871 147 aa3.94□□□□□ -1.78
PRKD3-210ENST00000494667 TLE1Q04724 770 aa3.94□□□□□ -1.78
PRKD3-210ENST00000494667 IZUMO4Q1ZYL8 232 aa3.94□□□□□ -1.78
PRKD3-210ENST00000494667 LINC01559Q495D7 138 aa3.94□□□□□ -1.78
PRKD3-210ENST00000494667 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.94□□□□□ -1.78
PRKD3-210ENST00000494667 LYSMD4Q5XG99 296 aa3.94□□□□□ -1.78
PRKD3-210ENST00000494667 RNASEKQ6P5S7 137 aaKnown RBP3.94□□□□□ -1.78
PRKD3-210ENST00000494667 C8orf86Q6ZUL3 223 aa3.94□□□□□ -1.78
PRKD3-210ENST00000494667 S100A7AQ86SG5 101 aa3.94□□□□□ -1.78
PRKD3-210ENST00000494667 COQ2Q96H96 371 aa3.94□□□□□ -1.78
PRKD3-210ENST00000494667 ADTRPQ96IZ2 230 aa3.94□□□□□ -1.78
PRKD3-210ENST00000494667 LINC01600Q96MT4 127 aa3.94□□□□□ -1.78
PRKD3-210ENST00000494667 SPAG8Q99932 426 aaPredicted RBP3.94□□□□□ -1.78
PRKD3-210ENST00000494667 CDIP1Q9H305 208 aa3.94□□□□□ -1.78
PRKD3-210ENST00000494667 SH2D2AQ9NP31 389 aa3.94□□□□□ -1.78
PRKD3-210ENST00000494667 TET1Q8NFU7 2136 aa3.94□□□□□ -1.78
PRKD3-210ENST00000494667 TRAV24A0A0B4J272 114 aa3.94□□□□□ -1.78
PRKD3-210ENST00000494667 TRBV6-1A0A0K0K1D8 114 aa3.94□□□□□ -1.78
PRKD3-210ENST00000494667 MANSC4A6NHS7 340 aaPredicted RBP3.94□□□□□ -1.78
PRKD3-210ENST00000494667 NPIPB6E9PJ23 425 aa3.94□□□□□ -1.78
PRKD3-210ENST00000494667 J3KRW8 73 aa3.94□□□□□ -1.78
PRKD3-210ENST00000494667 DLL1O00548 723 aa3.94□□□□□ -1.78
PRKD3-210ENST00000494667 CCL16O15467 120 aa3.94□□□□□ -1.78
PRKD3-210ENST00000494667 GABRG2P18507 467 aa3.94□□□□□ -1.78
PRKD3-210ENST00000494667 BCL3P20749 454 aa3.94□□□□□ -1.78
PRKD3-210ENST00000494667 MLF1P58340 268 aa3.94□□□□□ -1.78
PRKD3-210ENST00000494667 GAGE5Q13069 117 aa3.94□□□□□ -1.78
PRKD3-210ENST00000494667 GAGE6Q13070 117 aa3.94□□□□□ -1.78
PRKD3-210ENST00000494667 GCSAMLQ5JQS6 135 aa3.94□□□□□ -1.78
PRKD3-210ENST00000494667 C20orf204Q6ZNR8 217 aa3.94□□□□□ -1.78
PRKD3-210ENST00000494667 PIP4P2Q8N4L2 257 aa3.94□□□□□ -1.78
PRKD3-210ENST00000494667 SPEM1Q8N4L4 309 aa3.94□□□□□ -1.78
PRKD3-210ENST00000494667 OR10D3Q8NH80 312 aa3.94□□□□□ -1.78
PRKD3-210ENST00000494667 OR10G6Q8NH81 332 aa3.94□□□□□ -1.78
PRKD3-210ENST00000494667 PPP1R35Q8TAP8 253 aa3.94□□□□□ -1.78
PRKD3-210ENST00000494667 ST6GALNAC6Q969X2 333 aa3.94□□□□□ -1.78
PRKD3-210ENST00000494667 ZNF503Q96F45 646 aa3.94□□□□□ -1.78
PRKD3-210ENST00000494667 PERPQ96FX8 193 aa3.94□□□□□ -1.78
PRKD3-210ENST00000494667 CDX2Q99626 313 aaPredicted RBP3.94□□□□□ -1.78
PRKD3-210ENST00000494667 MRPL32Q9BYC8 188 aaKnown RBP3.94□□□□□ -1.78
PRKD3-210ENST00000494667 FGF23Q9GZV9 251 aaPredicted RBP3.94□□□□□ -1.78
PRKD3-210ENST00000494667 RNASE7Q9H1E1 156 aaKnown RBP3.94□□□□□ -1.78
PRKD3-210ENST00000494667 WDR54Q9H977 334 aa3.94□□□□□ -1.78
PRKD3-210ENST00000494667 A0A1B0GW15 77 aa3.94□□□□□ -1.78
PRKD3-210ENST00000494667 A1L4Q6 167 aa3.94□□□□□ -1.78
PRKD3-210ENST00000494667 F5H5K5 113 aa3.94□□□□□ -1.78
PRKD3-210ENST00000494667 TNFSF12O43508 249 aa3.94□□□□□ -1.78
PRKD3-210ENST00000494667 SMIM13P0DJ93 91 aa3.94□□□□□ -1.78
PRKD3-210ENST00000494667 MYF5P13349 255 aa3.94□□□□□ -1.78
PRKD3-210ENST00000494667 FASLGP48023 281 aa3.94□□□□□ -1.78
PRKD3-210ENST00000494667 RPL8P62917 257 aaKnown RBP3.94□□□□□ -1.78
PRKD3-210ENST00000494667 MEF2CQ06413 473 aaPredicted RBP3.94□□□□□ -1.78
PRKD3-210ENST00000494667 PAX8Q06710 450 aa3.94□□□□□ -1.78
PRKD3-210ENST00000494667 DOLPP1Q86YN1 238 aa3.94□□□□□ -1.78
PRKD3-210ENST00000494667 IL36RNQ9UBH0 155 aa3.94□□□□□ -1.78
PRKD3-210ENST00000494667 TP73-AS1Q9UF72 201 aa3.94□□□□□ -1.78
PRKD3-210ENST00000494667 LOC102724200A0A096LPH7 203 aaPredicted RBP3.93□□□□□ -1.78
PRKD3-210ENST00000494667 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.93□□□□□ -1.78
PRKD3-210ENST00000494667 LILRA5A6NI73 299 aa3.93□□□□□ -1.78
PRKD3-210ENST00000494667 H3BMG7 143 aa3.93□□□□□ -1.78
PRKD3-210ENST00000494667 HAX1O00165 279 aa3.93□□□□□ -1.78
PRKD3-210ENST00000494667 SYNGR1O43759 233 aa3.93□□□□□ -1.78
PRKD3-210ENST00000494667 SLC25A17O43808 307 aa3.93□□□□□ -1.78
PRKD3-210ENST00000494667 APOHP02749 345 aaPredicted RBP3.93□□□□□ -1.78
PRKD3-210ENST00000494667 SP1P08047 785 aa3.93□□□□□ -1.78
PRKD3-210ENST00000494667 IGFBP2P18065 325 aa3.93□□□□□ -1.78
PRKD3-210ENST00000494667 PLA2G5P39877 138 aa3.93□□□□□ -1.78
PRKD3-210ENST00000494667 MYCNOSP40205 109 aa3.93□□□□□ -1.78
PRKD3-210ENST00000494667 CATR1Q13166 79 aa3.93□□□□□ -1.78
PRKD3-210ENST00000494667 PRAMEF5Q5TYX0 476 aa3.93□□□□□ -1.78
PRKD3-210ENST00000494667 PRAMEF6Q5VXH4 476 aa3.93□□□□□ -1.78
PRKD3-210ENST00000494667 NFAM1Q8NET5 270 aaPredicted RBP3.93□□□□□ -1.78
PRKD3-210ENST00000494667 NEU4Q8WWR8 484 aaPredicted RBP3.93□□□□□ -1.78
PRKD3-210ENST00000494667 GPHA2Q96T91 129 aa3.93□□□□□ -1.78
PRKD3-210ENST00000494667 ZMAT4Q9H898 229 aa3.93□□□□□ -1.78
PRKD3-210ENST00000494667 CLCF1Q9UBD9 225 aa3.93□□□□□ -1.78
PRKD3-210ENST00000494667 INSIG2Q9Y5U4 225 aa3.93□□□□□ -1.78
PRKD3-210ENST00000494667 TRBV7-9A0A0J9YWB2 115 aa3.93□□□□□ -1.78
PRKD3-210ENST00000494667 GGTLC3B5MD39 225 aa3.93□□□□□ -1.78
PRKD3-210ENST00000494667 NTF4P34130 210 aa3.93□□□□□ -1.78
PRKD3-210ENST00000494667 MNX1P50219 401 aaPredicted RBP3.93□□□□□ -1.78
PRKD3-210ENST00000494667 FOXE3Q13461 319 aa3.93□□□□□ -1.78
PRKD3-210ENST00000494667 Q6Q795 121 aa3.93□□□□□ -1.78
PRKD3-210ENST00000494667 ZNF788Q6ZQV5 615 aa3.93□□□□□ -1.78
PRKD3-210ENST00000494667 SSX8Q7RTT4 187 aa3.93□□□□□ -1.78
PRKD3-210ENST00000494667 U3KQK5 164 aa3.93□□□□□ -1.78
PRKD3-210ENST00000494667 NCOA6Q14686 2063 aaPredicted RBP3.93□□□□□ -1.78
PRKD3-210ENST00000494667 SPAARA0A1B0GVQ0 90 aa3.93□□□□□ -1.78
PRKD3-210ENST00000494667 C19orf71A6NCJ1 209 aa3.93□□□□□ -1.78
PRKD3-210ENST00000494667 SRD5A1P18405 259 aa3.93□□□□□ -1.78
PRKD3-210ENST00000494667 GPR12P47775 334 aa3.93□□□□□ -1.78
PRKD3-210ENST00000494667 PCBD1P61457 104 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms