RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 MUC6Q6W4X9 2439 aa9.12□□□□□ -0.95
CHMP3-209ENST00000494623 VSTM5A8MXK1 200 aa9.12□□□□□ -0.95
CHMP3-209ENST00000494623 APOA2P02652 100 aa9.12□□□□□ -0.95
CHMP3-209ENST00000494623 SRP14P37108 136 aaKnown RBP9.12□□□□□ -0.95
CHMP3-209ENST00000494623 SSTP61278 116 aa9.12□□□□□ -0.95
CHMP3-209ENST00000494623 PRR20EP86478 221 aa9.12□□□□□ -0.95
CHMP3-209ENST00000494623 PRR20CP86479 221 aa9.12□□□□□ -0.95
CHMP3-209ENST00000494623 PRR20DP86480 221 aa9.12□□□□□ -0.95
CHMP3-209ENST00000494623 PRR20BP86481 221 aa9.12□□□□□ -0.95
CHMP3-209ENST00000494623 PRR20AP86496 221 aa9.12□□□□□ -0.95
CHMP3-209ENST00000494623 KCNIP4Q6PIL6 250 aa9.12□□□□□ -0.95
CHMP3-209ENST00000494623 OR10X1Q8NGY0 326 aa9.12□□□□□ -0.95
CHMP3-209ENST00000494623 FKBP11Q9NYL4 201 aa9.12□□□□□ -0.95
CHMP3-209ENST00000494623 JKAMPQ9P055 326 aa9.12□□□□□ -0.95
CHMP3-209ENST00000494623 PITPNC1Q9UKF7 332 aa9.12□□□□□ -0.95
CHMP3-209ENST00000494623 TRBV20OR9-2A0A075B6H5 130 aa9.12□□□□□ -0.95
CHMP3-209ENST00000494623 OCC1Q8TAD7 63 aa9.12□□□□□ -0.95
CHMP3-209ENST00000494623 FLYWCH2Q96CP2 140 aaKnown RBP9.12□□□□□ -0.95
CHMP3-209ENST00000494623 COMMD5Q9GZQ3 224 aa9.12□□□□□ -0.95
CHMP3-209ENST00000494623 DYNLRB1Q9NP97 96 aa9.12□□□□□ -0.95
CHMP3-209ENST00000494623 BET1LQ9NYM9 111 aa9.12□□□□□ -0.95
CHMP3-209ENST00000494623 FUT9Q9Y231 359 aa9.12□□□□□ -0.95
CHMP3-209ENST00000494623 IGKV1OR2-108A0A075B7D4 117 aa9.11□□□□□ -0.95
CHMP3-209ENST00000494623 H0YJW9 148 aa9.11□□□□□ -0.95
CHMP3-209ENST00000494623 DVL1O14640 695 aa9.11□□□□□ -0.95
CHMP3-209ENST00000494623 GGCTO75223 188 aaKnown RBP9.11□□□□□ -0.95
CHMP3-209ENST00000494623 OR10J1P30954 320 aa9.11□□□□□ -0.95
CHMP3-209ENST00000494623 GAMTQ14353 236 aa9.11□□□□□ -0.95
CHMP3-209ENST00000494623 TBR1Q16650 682 aa9.11□□□□□ -0.95
CHMP3-209ENST00000494623 ANKRD39Q53RE8 183 aa9.11□□□□□ -0.95
CHMP3-209ENST00000494623 LRRC10Q5BKY1 277 aa9.11□□□□□ -0.95
CHMP3-209ENST00000494623 TMEM144Q7Z5S9 345 aa9.11□□□□□ -0.95
CHMP3-209ENST00000494623 SPACA3Q8IXA5 215 aa9.11□□□□□ -0.95
CHMP3-209ENST00000494623 OSR1Q8TAX0 266 aaPredicted RBP9.11□□□□□ -0.95
CHMP3-209ENST00000494623 RNASE6Q93091 150 aaKnown RBP9.11□□□□□ -0.95
CHMP3-209ENST00000494623 NABP2Q9BQ15 211 aa9.11□□□□□ -0.95
CHMP3-209ENST00000494623 TXNDC17Q9BRA2 123 aa9.11□□□□□ -0.95
CHMP3-209ENST00000494623 SLC45A2Q9UMX9 530 aa9.11□□□□□ -0.95
CHMP3-209ENST00000494623 A0A0U1RQK1 487 aa9.11□□□□□ -0.95
CHMP3-209ENST00000494623 ZNF320A2RRD8 509 aa9.11□□□□□ -0.95
CHMP3-209ENST00000494623 XKRY2A2RUG3 117 aa9.11□□□□□ -0.95
CHMP3-209ENST00000494623 E7EUB6 86 aa9.11□□□□□ -0.95
CHMP3-209ENST00000494623 MT-CO2P00403 227 aa9.11□□□□□ -0.95
CHMP3-209ENST00000494623 PSG5Q15238 335 aa9.11□□□□□ -0.95
CHMP3-209ENST00000494623 OR5B3Q8NH48 314 aa9.11□□□□□ -0.95
CHMP3-209ENST00000494623 ARFGEF3Q5TH69 2177 aa9.11□□□□□ -0.95
CHMP3-209ENST00000494623 DCHS1Q96JQ0 3298 aa9.11□□□□□ -0.95
CHMP3-209ENST00000494623 TRBV23-1A0A0A0MS06 115 aa9.11□□□□□ -0.95
CHMP3-209ENST00000494623 MDFIC2A0A1B0GVS7 189 aa9.11□□□□□ -0.95
CHMP3-209ENST00000494623 E7EQL1 145 aa9.11□□□□□ -0.95
CHMP3-209ENST00000494623 IGHV2-70P01814 119 aa9.11□□□□□ -0.95
CHMP3-209ENST00000494623 RNASE2P10153 161 aaKnown RBP9.11□□□□□ -0.95
CHMP3-209ENST00000494623 SFTPCP11686 197 aa9.11□□□□□ -0.95
CHMP3-209ENST00000494623 PRSS8Q16651 343 aa9.11□□□□□ -0.95
CHMP3-209ENST00000494623 OR9G1Q8NH87 305 aa9.11□□□□□ -0.95
CHMP3-209ENST00000494623 SGMS2Q8NHU3 365 aa9.11□□□□□ -0.95
CHMP3-209ENST00000494623 SFRP2Q96HF1 295 aa9.11□□□□□ -0.95
CHMP3-209ENST00000494623 PACRGQ96M98 296 aaPredicted RBP9.11□□□□□ -0.95
CHMP3-209ENST00000494623 HIST1H2BLQ99880 126 aa9.11□□□□□ -0.95
CHMP3-209ENST00000494623 CTSZQ9UBR2 303 aa9.11□□□□□ -0.95
CHMP3-209ENST00000494623 ZNF835Q9Y2P0 537 aa9.11□□□□□ -0.95
CHMP3-209ENST00000494623 IL3RAP26951 378 aa9.1□□□□□ -0.95
CHMP3-209ENST00000494623 RPL8P62917 257 aaKnown RBP9.1□□□□□ -0.95
CHMP3-209ENST00000494623 C2orf83Q53S99 150 aa9.1□□□□□ -0.95
CHMP3-209ENST00000494623 OR5AN1Q8NGI8 311 aa9.1□□□□□ -0.95
CHMP3-209ENST00000494623 OR2T6Q8NHC8 308 aa9.1□□□□□ -0.95
CHMP3-209ENST00000494623 SHISA9B4DS77 424 aa9.1□□□□□ -0.95
CHMP3-209ENST00000494623 FNDC10F2Z333 226 aa9.1□□□□□ -0.95
CHMP3-209ENST00000494623 CD99P14209 185 aa9.1□□□□□ -0.95
CHMP3-209ENST00000494623 ERHP84090 104 aaKnown RBP9.1□□□□□ -0.95
CHMP3-209ENST00000494623 ASCL5Q7RTU5 278 aa9.1□□□□□ -0.95
CHMP3-209ENST00000494623 TMEM183AQ8IXX5 376 aa9.1□□□□□ -0.95
CHMP3-209ENST00000494623 OR1P1Q8NH06 330 aa9.1□□□□□ -0.95
CHMP3-209ENST00000494623 ACY3Q96HD9 319 aa9.1□□□□□ -0.95
CHMP3-209ENST00000494623 NDUFA4L2Q9NRX3 87 aa9.1□□□□□ -0.95
CHMP3-209ENST00000494623 TNFRSF13BO14836 293 aaPredicted RBP9.09□□□□□ -0.95
CHMP3-209ENST00000494623 IGHV3-48P01763 117 aa9.09□□□□□ -0.95
CHMP3-209ENST00000494623 TMEM177Q53S58 311 aa9.09□□□□□ -0.95
CHMP3-209ENST00000494623 ACTL10Q5JWF8 245 aa9.09□□□□□ -0.95
CHMP3-209ENST00000494623 OR1L8Q8NGR8 309 aa9.09□□□□□ -0.95
CHMP3-209ENST00000494623 UHRF2Q96PU4 802 aa9.09□□□□□ -0.95
CHMP3-209ENST00000494623 PFDN5Q99471 154 aa9.09□□□□□ -0.95
CHMP3-209ENST00000494623 NGBQ9NPG2 151 aa9.09□□□□□ -0.95
CHMP3-209ENST00000494623 ENSAO43768 121 aaKnown RBP9.09□□□□□ -0.95
CHMP3-209ENST00000494623 OR7C2O60412 319 aa9.09□□□□□ -0.95
CHMP3-209ENST00000494623 OR10J4P0C629 311 aa9.09□□□□□ -0.95
CHMP3-209ENST00000494623 FAM87AP0C7U9 286 aa9.09□□□□□ -0.95
CHMP3-209ENST00000494623 CD69Q07108 199 aa9.09□□□□□ -0.95
CHMP3-209ENST00000494623 C10orf55Q5SWW7 151 aa9.09□□□□□ -0.95
CHMP3-209ENST00000494623 OR10G8Q8NGN5 311 aa9.09□□□□□ -0.95
CHMP3-209ENST00000494623 OR4C13Q8NGP0 309 aa9.09□□□□□ -0.95
CHMP3-209ENST00000494623 SCNM1Q9BWG6 230 aa9.09□□□□□ -0.95
CHMP3-209ENST00000494623 DMRT1Q9Y5R6 373 aa9.09□□□□□ -0.95
CHMP3-209ENST00000494623 TYMSP04818 313 aa9.08□□□□□ -0.96
CHMP3-209ENST00000494623 LOXP28300 417 aaPredicted RBP9.08□□□□□ -0.96
CHMP3-209ENST00000494623 PRB3Q04118 309 aaPredicted RBP9.08□□□□□ -0.96
CHMP3-209ENST00000494623 DMRTC2Q8IXT2 367 aaPredicted RBP9.08□□□□□ -0.96
CHMP3-209ENST00000494623 TMEM186Q96B77 213 aa9.08□□□□□ -0.96
CHMP3-209ENST00000494623 RITA1Q96K30 269 aa9.08□□□□□ -0.96
CHMP3-209ENST00000494623 TECRQ9NZ01 308 aaKnown RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms