RNA–Protein interactions for RNA: ENST00000492816.6

FN1-224, Transcript of fibronectin 1, humanhuman

TSL 5

Gene FN1, Length 9,171 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-224ENST00000492816 STRCP1A6NGW2 1772 aa4.53□□□□□ -1.68
FN1-224ENST00000492816 GALP22466 123 aa4.53□□□□□ -1.68
FN1-224ENST00000492816 FCN2Q15485 313 aa4.53□□□□□ -1.68
FN1-224ENST00000492816 BRD3OSQ6XYD6 125 aa4.53□□□□□ -1.68
FN1-224ENST00000492816 FAM90A26D6RGX4 464 aa4.53□□□□□ -1.68
FN1-224ENST00000492816 PEX7O00628 323 aa4.53□□□□□ -1.68
FN1-224ENST00000492816 MLNRO43193 412 aa4.53□□□□□ -1.68
FN1-224ENST00000492816 FSHBP01225 129 aa4.53□□□□□ -1.68
FN1-224ENST00000492816 LINC00158P58513 81 aa4.53□□□□□ -1.68
FN1-224ENST00000492816 ERCC8Q13216 396 aa4.53□□□□□ -1.68
FN1-224ENST00000492816 ANXA2RQ3ZCQ2 193 aa4.53□□□□□ -1.68
FN1-224ENST00000492816 BAP18Q8IXM2 172 aa4.53□□□□□ -1.68
FN1-224ENST00000492816 ZNRF1Q8ND25 227 aa4.53□□□□□ -1.68
FN1-224ENST00000492816 FRRS1LQ9P0K9 344 aa4.53□□□□□ -1.68
FN1-224ENST00000492816 SAA1P0DJI8 122 aaPredicted RBP4.53□□□□□ -1.68
FN1-224ENST00000492816 FOXC2Q99958 501 aa4.53□□□□□ -1.68
FN1-224ENST00000492816 RRHO14718 337 aa4.53□□□□□ -1.68
FN1-224ENST00000492816 SLC25A47Q6Q0C1 308 aa4.53□□□□□ -1.68
FN1-224ENST00000492816 EMCNQ9ULC0 261 aa4.53□□□□□ -1.68
FN1-224ENST00000492816 SCN1AP35498 2009 aa4.53□□□□□ -1.68
FN1-224ENST00000492816 NTN3O00634 580 aaPredicted RBP4.53□□□□□ -1.68
FN1-224ENST00000492816 NCMAPQ5T1S8 102 aa4.52□□□□□ -1.69
FN1-224ENST00000492816 PEAR1Q5VY43 1037 aaPredicted RBP4.52□□□□□ -1.69
FN1-224ENST00000492816 PPP1R1CQ8WVI7 109 aa4.52□□□□□ -1.69
FN1-224ENST00000492816 VAX2Q9UIW0 290 aa4.52□□□□□ -1.69
FN1-224ENST00000492816 POLR2GP62487 172 aaKnown RBP eCLIP4.52□□□□□ -1.69
FN1-224ENST00000492816 WDR82Q6UXN9 313 aa4.52□□□□□ -1.69
FN1-224ENST00000492816 CYP2G1PQ6ZSU1 146 aa4.52□□□□□ -1.69
FN1-224ENST00000492816 SRSF12Q8WXF0 261 aaKnown RBP4.52□□□□□ -1.69
FN1-224ENST00000492816 LEAP2Q969E1 77 aa4.52□□□□□ -1.69
FN1-224ENST00000492816 UBE2E2Q96LR5 201 aa4.52□□□□□ -1.69
FN1-224ENST00000492816 RNF5Q99942 180 aa4.52□□□□□ -1.69
FN1-224ENST00000492816 SLC35B3Q9H1N7 401 aa4.52□□□□□ -1.69
FN1-224ENST00000492816 OTOFQ9HC10 1997 aa4.52□□□□□ -1.69
FN1-224ENST00000492816 ARFGEF1Q9Y6D6 1849 aa4.52□□□□□ -1.69
FN1-224ENST00000492816 SPATA31B1PQ5VZV4 182 aa4.52□□□□□ -1.69
FN1-224ENST00000492816 RNF182Q8N6D2 247 aa4.52□□□□□ -1.69
FN1-224ENST00000492816 GLMPQ8WWB7 406 aa4.52□□□□□ -1.69
FN1-224ENST00000492816 GGTLC1Q9BX51 225 aa4.52□□□□□ -1.69
FN1-224ENST00000492816 ISG20L2Q9H9L3 353 aaKnown RBP4.52□□□□□ -1.69
FN1-224ENST00000492816 RAMP3O60896 148 aa4.52□□□□□ -1.69
FN1-224ENST00000492816 HSPB1P04792 205 aaKnown RBP4.52□□□□□ -1.69
FN1-224ENST00000492816 TMEM50BP56557 158 aa4.52□□□□□ -1.69
FN1-224ENST00000492816 GLRX5Q86SX6 157 aa4.52□□□□□ -1.69
FN1-224ENST00000492816 SCGB3A1Q96QR1 104 aa4.52□□□□□ -1.69
FN1-224ENST00000492816 MRPL18Q9H0U6 180 aaKnown RBP4.52□□□□□ -1.69
FN1-224ENST00000492816 EFNA2O43921 213 aa4.52□□□□□ -1.69
FN1-224ENST00000492816 GCM2O75603 506 aaPredicted RBP4.52□□□□□ -1.69
FN1-224ENST00000492816 NDUFB6O95139 128 aa4.52□□□□□ -1.69
FN1-224ENST00000492816 SIX6O95475 246 aa4.52□□□□□ -1.69
FN1-224ENST00000492816 TCL1AP56279 114 aa4.52□□□□□ -1.69
FN1-224ENST00000492816 C6orf226Q5I0X4 101 aa4.52□□□□□ -1.69
FN1-224ENST00000492816 FAM219BQ5XKK7 198 aa4.52□□□□□ -1.69
FN1-224ENST00000492816 HIST1H4GQ99525 98 aa4.52□□□□□ -1.69
FN1-224ENST00000492816 MRPL20Q9BYC9 149 aaKnown RBP4.52□□□□□ -1.69
FN1-224ENST00000492816 GSX2Q9BZM3 304 aa4.52□□□□□ -1.69
FN1-224ENST00000492816 DOCK5Q9H7D0 1870 aa4.52□□□□□ -1.69
FN1-224ENST00000492816 DOCK3Q8IZD9 2030 aa4.52□□□□□ -1.69
FN1-224ENST00000492816 IGHV1-69DA0A0B4J2H0 117 aa4.52□□□□□ -1.69
FN1-224ENST00000492816 CLDN34H7C241 214 aa4.52□□□□□ -1.69
FN1-224ENST00000492816 IGHV1-69P01742 117 aa4.52□□□□□ -1.69
FN1-224ENST00000492816 TMEM91Q6ZNR0 172 aa4.52□□□□□ -1.69
FN1-224ENST00000492816 GOLT1AQ6ZVE7 132 aa4.52□□□□□ -1.69
FN1-224ENST00000492816 LINC00305Q7Z4B0 112 aa4.52□□□□□ -1.69
FN1-224ENST00000492816 SPRED2Q7Z698 418 aa4.52□□□□□ -1.69
FN1-224ENST00000492816 KLK15Q9H2R5 256 aa4.52□□□□□ -1.69
FN1-224ENST00000492816 SLC25A15Q9Y619 301 aa4.52□□□□□ -1.69
FN1-224ENST00000492816 C5orf64Q2M2E5 130 aa4.52□□□□□ -1.69
FN1-224ENST00000492816 TMEM88Q6PEY1 159 aa4.52□□□□□ -1.69
FN1-224ENST00000492816 FAM216BQ8N7L0 139 aa4.52□□□□□ -1.69
FN1-224ENST00000492816 MAPK1IP1LQ8NDC0 245 aa4.52□□□□□ -1.69
FN1-224ENST00000492816 CACNG8Q8WXS5 425 aa4.52□□□□□ -1.69
FN1-224ENST00000492816 PLSCR4Q9NRQ2 329 aa4.52□□□□□ -1.69
FN1-224ENST00000492816 FAM74A7A6NL05 159 aa4.51□□□□□ -1.69
FN1-224ENST00000492816 GLIPR1P48060 266 aa4.51□□□□□ -1.69
FN1-224ENST00000492816 SPSB4Q96A44 273 aa4.51□□□□□ -1.69
FN1-224ENST00000492816 MARCH11A6NNE9 402 aa4.51□□□□□ -1.69
FN1-224ENST00000492816 DIRC3C9JPN6 131 aa4.51□□□□□ -1.69
FN1-224ENST00000492816 ZNF253O75346 499 aa4.51□□□□□ -1.69
FN1-224ENST00000492816 RIPPLY3P57055 190 aa4.51□□□□□ -1.69
FN1-224ENST00000492816 ICAM4Q14773 271 aa4.51□□□□□ -1.69
FN1-224ENST00000492816 MAVSQ7Z434 540 aa4.51□□□□□ -1.69
FN1-224ENST00000492816 ZNF680Q8NEM1 530 aa4.51□□□□□ -1.69
FN1-224ENST00000492816 LOC107984156A0A0G2JMH3 177 aa4.51□□□□□ -1.69
FN1-224ENST00000492816 BCL2L11O43521 198 aa4.51□□□□□ -1.69
FN1-224ENST00000492816 TPTE2P1Q5T6R2 138 aa4.51□□□□□ -1.69
FN1-224ENST00000492816 C1QL2Q7Z5L3 287 aa4.51□□□□□ -1.69
FN1-224ENST00000492816 GPHB5Q86YW7 130 aa4.51□□□□□ -1.69
FN1-224ENST00000492816 ARL17AQ8IVW1 177 aa4.51□□□□□ -1.69
FN1-224ENST00000492816 NPIPB3Q92617 1050 aa4.51□□□□□ -1.69
FN1-224ENST00000492816 TP53RKQ96S44 253 aa4.51□□□□□ -1.69
FN1-224ENST00000492816 TRAV24A0A0B4J272 114 aa4.51□□□□□ -1.69
FN1-224ENST00000492816 C9orf170A2RU37 121 aa4.51□□□□□ -1.69
FN1-224ENST00000492816 HRKO00198 91 aa4.51□□□□□ -1.69
FN1-224ENST00000492816 CD28P10747 220 aa4.51□□□□□ -1.69
FN1-224ENST00000492816 RBMY1FQ15415 496 aaKnown RBP4.51□□□□□ -1.69
FN1-224ENST00000492816 MYOFQ9NZM1 2061 aa4.51□□□□□ -1.69
FN1-224ENST00000492816 PLPP2O43688 288 aa4.51□□□□□ -1.69
FN1-224ENST00000492816 TIAF1O95411 115 aa4.51□□□□□ -1.69
FN1-224ENST00000492816 PRB1P04280 392 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms