RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 CTSGP08311 255 aa11.67□□□□□ -0.54
PLOD3-216ENST00000489927 F2RP25116 425 aa11.67□□□□□ -0.54
PLOD3-216ENST00000489927 HERV-K104P61576 105 aa11.67□□□□□ -0.54
PLOD3-216ENST00000489927 C6orf62Q9GZU0 229 aaPredicted RBP11.67□□□□□ -0.54
PLOD3-216ENST00000489927 CSTL1Q9H114 145 aa11.67□□□□□ -0.54
PLOD3-216ENST00000489927 RNF167Q9H6Y7 350 aa11.67□□□□□ -0.54
PLOD3-216ENST00000489927 OR51B2Q9Y5P1 312 aa11.67□□□□□ -0.54
PLOD3-216ENST00000489927 IGHV7-4-1A0A0J9YVY3 117 aa11.66□□□□□ -0.54
PLOD3-216ENST00000489927 MPTX1A8MV57 137 aa11.66□□□□□ -0.54
PLOD3-216ENST00000489927 CHEK1O14757 476 aa11.66□□□□□ -0.54
PLOD3-216ENST00000489927 PGLYRP1O75594 196 aaPredicted RBP11.66□□□□□ -0.54
PLOD3-216ENST00000489927 LPAR6P43657 344 aa11.66□□□□□ -0.54
PLOD3-216ENST00000489927 CBX5P45973 191 aa11.66□□□□□ -0.54
PLOD3-216ENST00000489927 TFPI2P48307 235 aa11.66□□□□□ -0.54
PLOD3-216ENST00000489927 NANOS2P60321 138 aaKnown RBP11.66□□□□□ -0.54
PLOD3-216ENST00000489927 FCAMRQ8WWV6 532 aa11.66□□□□□ -0.54
PLOD3-216ENST00000489927 FCGR1BQ92637 280 aa11.66□□□□□ -0.54
PLOD3-216ENST00000489927 BORCS5Q969J3 196 aa11.66□□□□□ -0.54
PLOD3-216ENST00000489927 RARRES2Q99969 163 aa11.66□□□□□ -0.54
PLOD3-216ENST00000489927 RHPN1-AS1Q9BWJ2 59 aa11.66□□□□□ -0.54
PLOD3-216ENST00000489927 DIABLOQ9NR28 239 aa11.66□□□□□ -0.54
PLOD3-216ENST00000489927 EHFQ9NZC4 300 aa11.66□□□□□ -0.54
PLOD3-216ENST00000489927 RAB26Q9ULW5 256 aa11.66□□□□□ -0.54
PLOD3-216ENST00000489927 IGHV3-49A0A0A0MS15 119 aa11.65□□□□□ -0.54
PLOD3-216ENST00000489927 DBX1A6NMT0 343 aa11.65□□□□□ -0.54
PLOD3-216ENST00000489927 G6PCP35575 357 aa11.65□□□□□ -0.54
PLOD3-216ENST00000489927 RFX2P48378 723 aa11.65□□□□□ -0.54
PLOD3-216ENST00000489927 DHRS11Q6UWP2 260 aa11.65□□□□□ -0.54
PLOD3-216ENST00000489927 TMEM116Q8NCL8 245 aa11.65□□□□□ -0.54
PLOD3-216ENST00000489927 GATAD1Q8WUU5 269 aa11.65□□□□□ -0.54
PLOD3-216ENST00000489927 DGCR14Q96DF8 476 aaKnown RBP11.65□□□□□ -0.54
PLOD3-216ENST00000489927 KIAA1109Q2LD37 5005 aa11.65□□□□□ -0.54
PLOD3-216ENST00000489927 IGKV3-7A0A075B6H7 116 aa11.64□□□□□ -0.55
PLOD3-216ENST00000489927 SNAPC5O75971 98 aa11.64□□□□□ -0.55
PLOD3-216ENST00000489927 YIF1AO95070 293 aa11.64□□□□□ -0.55
PLOD3-216ENST00000489927 RELQ04864 619 aaPredicted RBP11.64□□□□□ -0.55
PLOD3-216ENST00000489927 CADM3Q8N126 398 aa11.64□□□□□ -0.55
PLOD3-216ENST00000489927 OR1P1Q8NH06 330 aa11.64□□□□□ -0.55
PLOD3-216ENST00000489927 C11orf45Q8TAV5 145 aa11.64□□□□□ -0.55
PLOD3-216ENST00000489927 SLC25A46Q96AG3 418 aa11.64□□□□□ -0.55
PLOD3-216ENST00000489927 MOB3AQ96BX8 217 aa11.64□□□□□ -0.55
PLOD3-216ENST00000489927 OR10C1Q96KK4 312 aa11.64□□□□□ -0.55
PLOD3-216ENST00000489927 TMEM56Q96MV1 263 aa11.64□□□□□ -0.55
PLOD3-216ENST00000489927 ZNF2Q9BSG1 426 aaPredicted RBP11.64□□□□□ -0.55
PLOD3-216ENST00000489927 IFT46Q9NQC8 304 aa11.64□□□□□ -0.55
PLOD3-216ENST00000489927 FBXL17Q9UF56 701 aa11.64□□□□□ -0.55
PLOD3-216ENST00000489927 PRNDQ9UKY0 176 aa11.64□□□□□ -0.55
PLOD3-216ENST00000489927 IGHV3OR16-13A0A075B7E8 117 aa11.63□□□□□ -0.55
PLOD3-216ENST00000489927 IGHV3-74A0A0B4J1X5 117 aa11.63□□□□□ -0.55
PLOD3-216ENST00000489927 LOC100506127A0A0U1RQW1 187 aa11.63□□□□□ -0.55
PLOD3-216ENST00000489927 NUPL2O15504 423 aaKnown RBP11.63□□□□□ -0.55
PLOD3-216ENST00000489927 CMC4P56277 68 aaPredicted RBP11.63□□□□□ -0.55
PLOD3-216ENST00000489927 RBMS2Q15434 407 aaKnown RBP11.63□□□□□ -0.55
PLOD3-216ENST00000489927 FAM90A2PQ658T7 463 aa11.63□□□□□ -0.55
PLOD3-216ENST00000489927 GBGT1Q8N5D6 347 aa11.63□□□□□ -0.55
PLOD3-216ENST00000489927 TSPAN14Q8NG11 270 aa11.63□□□□□ -0.55
PLOD3-216ENST00000489927 OR11H2Q8NH07 326 aa11.63□□□□□ -0.55
PLOD3-216ENST00000489927 MFFQ9GZY8 342 aa11.63□□□□□ -0.55
PLOD3-216ENST00000489927 C11orf68Q9H3H3 251 aaKnown RBP11.63□□□□□ -0.55
PLOD3-216ENST00000489927 TMEM14BQ9NUH8 114 aa11.63□□□□□ -0.55
PLOD3-216ENST00000489927 TRAV14DV4A0A0A6YYC5 116 aa11.62□□□□□ -0.55
PLOD3-216ENST00000489927 I3L2K1 104 aa11.62□□□□□ -0.55
PLOD3-216ENST00000489927 XRCC3O43542 346 aa11.62□□□□□ -0.55
PLOD3-216ENST00000489927 PMP2P02689 132 aa11.62□□□□□ -0.55
PLOD3-216ENST00000489927 IFNA4P05014 189 aa11.62□□□□□ -0.55
PLOD3-216ENST00000489927 PRR20EP86478 221 aa11.62□□□□□ -0.55
PLOD3-216ENST00000489927 PRR20CP86479 221 aa11.62□□□□□ -0.55
PLOD3-216ENST00000489927 PRR20DP86480 221 aa11.62□□□□□ -0.55
PLOD3-216ENST00000489927 PRR20BP86481 221 aa11.62□□□□□ -0.55
PLOD3-216ENST00000489927 PRR20AP86496 221 aa11.62□□□□□ -0.55
PLOD3-216ENST00000489927 CMTM1Q8IZ96 169 aa11.62□□□□□ -0.55
PLOD3-216ENST00000489927 MISP3Q96FF7 219 aa11.62□□□□□ -0.55
PLOD3-216ENST00000489927 NXF2Q9GZY0 626 aaKnown RBP11.62□□□□□ -0.55
PLOD3-216ENST00000489927 FXYD6Q9H0Q3 95 aa11.62□□□□□ -0.55
PLOD3-216ENST00000489927 FKBP11Q9NYL4 201 aa11.62□□□□□ -0.55
PLOD3-216ENST00000489927 C15orf61A6NNL5 157 aa11.61□□□□□ -0.55
PLOD3-216ENST00000489927 DEFB4AO15263 64 aa11.61□□□□□ -0.55
PLOD3-216ENST00000489927 CA1P00915 261 aaPredicted RBP11.61□□□□□ -0.55
PLOD3-216ENST00000489927 IGHV3-48P01763 117 aa11.61□□□□□ -0.55
PLOD3-216ENST00000489927 MFAP4P55083 255 aa11.61□□□□□ -0.55
PLOD3-216ENST00000489927 C2CD4CQ8TF44 421 aa11.61□□□□□ -0.55
PLOD3-216ENST00000489927 CMTM3Q96MX0 182 aa11.61□□□□□ -0.55
PLOD3-216ENST00000489927 ANAPC10Q9UM13 185 aa11.61□□□□□ -0.55
PLOD3-216ENST00000489927 DNAH6Q9C0G6 4158 aa11.6□□□□□ -0.55
PLOD3-216ENST00000489927 GPR31O00270 319 aa11.6□□□□□ -0.55
PLOD3-216ENST00000489927 MT-CO2P00403 227 aa11.6□□□□□ -0.55
PLOD3-216ENST00000489927 TCF24Q7RTU0 167 aa11.6□□□□□ -0.55
PLOD3-216ENST00000489927 OR5H2Q8NGV7 314 aa11.6□□□□□ -0.55
PLOD3-216ENST00000489927 S100A16Q96FQ6 103 aaKnown RBP11.6□□□□□ -0.55
PLOD3-216ENST00000489927 TSC22D3Q99576 134 aa11.6□□□□□ -0.55
PLOD3-216ENST00000489927 TXN2Q99757 166 aa11.6□□□□□ -0.55
PLOD3-216ENST00000489927 APOHP02749 345 aaPredicted RBP11.59□□□□□ -0.55
PLOD3-216ENST00000489927 TAS2R46P59540 309 aa11.59□□□□□ -0.55
PLOD3-216ENST00000489927 PAFAH1B2P68402 229 aa11.59□□□□□ -0.55
PLOD3-216ENST00000489927 PHLDA2Q53GA4 152 aa11.59□□□□□ -0.55
PLOD3-216ENST00000489927 LILRB2Q8N423 598 aa11.59□□□□□ -0.55
PLOD3-216ENST00000489927 ZNF114Q8NC26 417 aa11.59□□□□□ -0.55
PLOD3-216ENST00000489927 OR6F1Q8NGZ6 308 aa11.59□□□□□ -0.55
PLOD3-216ENST00000489927 ST8SIA2Q92186 375 aa11.59□□□□□ -0.55
PLOD3-216ENST00000489927 PINX1Q96BK5 328 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms