RNA–Protein interactions for RNA: ENST00000488910.1

ATG3-205, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 681 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-205ENST00000488910 ISOC1Q96CN7 298 aa13.22□□□□□ -0.29
ATG3-205ENST00000488910 TP53RKQ96S44 253 aa13.22□□□□□ -0.29
ATG3-205ENST00000488910 SLIRPQ9GZT3 109 aaKnown RBP13.22□□□□□ -0.29
ATG3-205ENST00000488910 C6orf62Q9GZU0 229 aaPredicted RBP13.22□□□□□ -0.29
ATG3-205ENST00000488910 ZMAT4Q9H898 229 aa13.22□□□□□ -0.29
ATG3-205ENST00000488910 RSL24D1Q9UHA3 163 aaKnown RBP13.22□□□□□ -0.29
ATG3-205ENST00000488910 ZNF785A8K8V0 405 aa13.21□□□□□ -0.29
ATG3-205ENST00000488910 DISC1C4P0D8 188 aa13.21□□□□□ -0.29
ATG3-205ENST00000488910 CTSDP07339 412 aaPredicted RBP13.21□□□□□ -0.29
ATG3-205ENST00000488910 MFAP2P55001 183 aa13.21□□□□□ -0.29
ATG3-205ENST00000488910 ELLP55199 621 aaPredicted RBP13.21□□□□□ -0.29
ATG3-205ENST00000488910 PRCDQ00LT1 54 aa13.21□□□□□ -0.29
ATG3-205ENST00000488910 SURF2Q15527 256 aaPredicted RBP13.21□□□□□ -0.29
ATG3-205ENST00000488910 SPSB3Q6PJ21 355 aa13.21□□□□□ -0.29
ATG3-205ENST00000488910 OR2C3Q8N628 320 aa13.21□□□□□ -0.29
ATG3-205ENST00000488910 OR13C8Q8NGS7 320 aa13.21□□□□□ -0.29
ATG3-205ENST00000488910 MARCH1Q8TCQ1 289 aa13.21□□□□□ -0.29
ATG3-205ENST00000488910 MARC2Q969Z3 335 aa13.21□□□□□ -0.29
ATG3-205ENST00000488910 BSCL2Q96G97 398 aaPredicted RBP13.21□□□□□ -0.29
ATG3-205ENST00000488910 ZNF436Q9C0F3 470 aaPredicted RBP13.21□□□□□ -0.29
ATG3-205ENST00000488910 ZC4H2Q9NQZ6 224 aa13.21□□□□□ -0.29
ATG3-205ENST00000488910 C21orf62Q9NYP8 219 aa13.21□□□□□ -0.29
ATG3-205ENST00000488910 TENM3Q9P273 2699 aa13.21□□□□□ -0.3
ATG3-205ENST00000488910 HUWE1Q7Z6Z7 4374 aaKnown RBP13.21□□□□□ -0.3
ATG3-205ENST00000488910 TMEM213A2RRL7 107 aa13.2□□□□□ -0.3
ATG3-205ENST00000488910 TGOLN2O43493 480 aa13.2□□□□□ -0.3
ATG3-205ENST00000488910 GSTZ1O43708 216 aaPredicted RBP13.2□□□□□ -0.3
ATG3-205ENST00000488910 AKAIN1P0CW23 69 aa13.2□□□□□ -0.3
ATG3-205ENST00000488910 ERHP84090 104 aaKnown RBP13.2□□□□□ -0.3
ATG3-205ENST00000488910 SCARB1Q8WTV0 552 aa13.2□□□□□ -0.3
ATG3-205ENST00000488910 TUBA4BQ9H853 241 aa13.2□□□□□ -0.3
ATG3-205ENST00000488910 GAR1Q9NY12 217 aaKnown RBP13.2□□□□□ -0.3
ATG3-205ENST00000488910 SLC2A8Q9NY64 477 aa13.2□□□□□ -0.3
ATG3-205ENST00000488910 C14orf166Q9Y224 244 aaKnown RBP13.2□□□□□ -0.3
ATG3-205ENST00000488910 UFC1Q9Y3C8 167 aa13.2□□□□□ -0.3
ATG3-205ENST00000488910 OR2T8A6NH00 312 aa13.19□□□□□ -0.3
ATG3-205ENST00000488910 K7EIM0 57 aa13.19□□□□□ -0.3
ATG3-205ENST00000488910 IGKV1-5P01602 117 aa13.19□□□□□ -0.3
ATG3-205ENST00000488910 P0C879 139 aa13.19□□□□□ -0.3
ATG3-205ENST00000488910 C8orf88P0DMB2 117 aa13.19□□□□□ -0.3
ATG3-205ENST00000488910 UCP1P25874 307 aa13.19□□□□□ -0.3
ATG3-205ENST00000488910 TNFSF8P32971 234 aa13.19□□□□□ -0.3
ATG3-205ENST00000488910 TRIM16LQ309B1 348 aa13.19□□□□□ -0.3
ATG3-205ENST00000488910 ZNF57Q68EA5 555 aaPredicted RBP13.19□□□□□ -0.3
ATG3-205ENST00000488910 UNQ9165/PRO28630Q6UXU0 137 aa13.19□□□□□ -0.3
ATG3-205ENST00000488910 UXS1Q8NBZ7 420 aa13.19□□□□□ -0.3
ATG3-205ENST00000488910 ZNF114Q8NC26 417 aa13.19□□□□□ -0.3
ATG3-205ENST00000488910 MCFD2Q8NI22 146 aa13.19□□□□□ -0.3
ATG3-205ENST00000488910 RCHY1Q96PM5 261 aa13.19□□□□□ -0.3
ATG3-205ENST00000488910 PRRT1Q99946 306 aa13.19□□□□□ -0.3
ATG3-205ENST00000488910 SOSTQ9BQB4 213 aa13.19□□□□□ -0.3
ATG3-205ENST00000488910 NXF2Q9GZY0 626 aaKnown RBP13.19□□□□□ -0.3
ATG3-205ENST00000488910 PLEKHA3Q9HB20 300 aa13.19□□□□□ -0.3
ATG3-205ENST00000488910 MRPL27Q9P0M9 148 aaKnown RBP13.19□□□□□ -0.3
ATG3-205ENST00000488910 CEPT1Q9Y6K0 416 aa13.19□□□□□ -0.3
ATG3-205ENST00000488910 A0A0B4J293 547 aa13.18□□□□□ -0.3
ATG3-205ENST00000488910 FABP12A6NFH5 140 aa13.18□□□□□ -0.3
ATG3-205ENST00000488910 EDN2P20800 178 aa13.18□□□□□ -0.3
ATG3-205ENST00000488910 AKR1C2P52895 323 aa13.18□□□□□ -0.3
ATG3-205ENST00000488910 SP6Q3SY56 376 aa13.18□□□□□ -0.3
ATG3-205ENST00000488910 TM4SF20Q53R12 229 aa13.18□□□□□ -0.3
ATG3-205ENST00000488910 FAAP20Q6NZ36 180 aa13.18□□□□□ -0.3
ATG3-205ENST00000488910 OR4C16Q8NGL9 310 aa13.18□□□□□ -0.3
ATG3-205ENST00000488910 CACNG8Q8WXS5 425 aa13.18□□□□□ -0.3
ATG3-205ENST00000488910 RRNAD1Q96FB5 475 aaKnown RBP13.18□□□□□ -0.3
ATG3-205ENST00000488910 NEURL2Q9BR09 285 aa13.18□□□□□ -0.3
ATG3-205ENST00000488910 TM2D3Q9BRN9 247 aa13.18□□□□□ -0.3
ATG3-205ENST00000488910 RTBDNQ9BSG5 229 aaPredicted RBP13.18□□□□□ -0.3
ATG3-205ENST00000488910 IGHV3-21A0A0B4J1V1 117 aa13.17□□□□□ -0.3
ATG3-205ENST00000488910 ANKRD20A5PA0PJZ0 165 aa13.17□□□□□ -0.3
ATG3-205ENST00000488910 INS-IGF2F8WCM5 200 aa13.17□□□□□ -0.3
ATG3-205ENST00000488910 CD81P60033 236 aa13.17□□□□□ -0.3
ATG3-205ENST00000488910 GUCA2BQ16661 112 aa13.17□□□□□ -0.3
ATG3-205ENST00000488910 IZUMO4Q1ZYL8 232 aa13.17□□□□□ -0.3
ATG3-205ENST00000488910 TXN2Q99757 166 aa13.17□□□□□ -0.3
ATG3-205ENST00000488910 MLXQ9UH92 298 aa13.17□□□□□ -0.3
ATG3-205ENST00000488910 GPR132Q9UNW8 380 aa13.17□□□□□ -0.3
ATG3-205ENST00000488910 STAB2Q8WWQ8 2551 aa13.16□□□□□ -0.3
ATG3-205ENST00000488910 TRAV25A0A0B4J276 109 aa13.16□□□□□ -0.3
ATG3-205ENST00000488910 IGHV3-35A0A0C4DH35 117 aa13.16□□□□□ -0.3
ATG3-205ENST00000488910 TEX13DA0A0J9YY54 714 aaPredicted RBP13.16□□□□□ -0.3
ATG3-205ENST00000488910 F8W735 103 aaPredicted RBP13.16□□□□□ -0.3
ATG3-205ENST00000488910 I3L2K1 104 aa13.16□□□□□ -0.3
ATG3-205ENST00000488910 NDUFA4O00483 81 aa13.16□□□□□ -0.3
ATG3-205ENST00000488910 CDS2O95674 445 aa13.16□□□□□ -0.3
ATG3-205ENST00000488910 IFNA17P01571 189 aa13.16□□□□□ -0.3
ATG3-205ENST00000488910 FCGR2BP31994 310 aaPredicted RBP13.16□□□□□ -0.3
ATG3-205ENST00000488910 MFAP4P55083 255 aa13.16□□□□□ -0.3
ATG3-205ENST00000488910 DHODHQ02127 395 aa13.16□□□□□ -0.3
ATG3-205ENST00000488910 Q56UQ5 140 aa13.16□□□□□ -0.3
ATG3-205ENST00000488910 FAM219AQ8IW50 185 aa13.16□□□□□ -0.3
ATG3-205ENST00000488910 TMEM190Q8WZ59 177 aa13.16□□□□□ -0.3
ATG3-205ENST00000488910 MISP3Q96FF7 219 aa13.16□□□□□ -0.3
ATG3-205ENST00000488910 WDR89Q96FK6 387 aaPredicted RBP13.16□□□□□ -0.3
ATG3-205ENST00000488910 SCGB3A2Q96PL1 93 aa13.16□□□□□ -0.3
ATG3-205ENST00000488910 PDCD10Q9BUL8 212 aa13.16□□□□□ -0.3
ATG3-205ENST00000488910 TMEM222Q9H0R3 208 aa13.16□□□□□ -0.3
ATG3-205ENST00000488910 C5orf66Q9H5L9 145 aa13.16□□□□□ -0.3
ATG3-205ENST00000488910 NAA60Q9H7X0 242 aa13.16□□□□□ -0.3
ATG3-205ENST00000488910 SCP2D1Q9UJQ7 156 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms