RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 PRR20DP86480 221 aa13.96□□□□□ -0.17
GGPS1-206ENST00000488594 PRR20BP86481 221 aa13.96□□□□□ -0.17
GGPS1-206ENST00000488594 PRR20AP86496 221 aa13.96□□□□□ -0.17
GGPS1-206ENST00000488594 ZNF124Q15973 351 aa13.96□□□□□ -0.17
GGPS1-206ENST00000488594 OR5AP2Q8NGF4 316 aa13.96□□□□□ -0.17
GGPS1-206ENST00000488594 TMEM56Q96MV1 263 aa13.96□□□□□ -0.17
GGPS1-206ENST00000488594 OR51B2Q9Y5P1 312 aa13.96□□□□□ -0.17
GGPS1-206ENST00000488594 F2RP25116 425 aa13.96□□□□□ -0.18
GGPS1-206ENST00000488594 GNRHRP30968 328 aa13.96□□□□□ -0.18
GGPS1-206ENST00000488594 CBX5P45973 191 aa13.96□□□□□ -0.18
GGPS1-206ENST00000488594 TFPI2P48307 235 aa13.96□□□□□ -0.18
GGPS1-206ENST00000488594 HERV-K104P61576 105 aa13.96□□□□□ -0.18
GGPS1-206ENST00000488594 PAFAH1B2P68402 229 aa13.96□□□□□ -0.18
GGPS1-206ENST00000488594 OR1P1Q8NH06 330 aa13.96□□□□□ -0.18
GGPS1-206ENST00000488594 CNBD2Q96M20 576 aa13.96□□□□□ -0.18
GGPS1-206ENST00000488594 VCX3BQ9H321 246 aa13.96□□□□□ -0.18
GGPS1-206ENST00000488594 FKBP11Q9NYL4 201 aa13.96□□□□□ -0.18
GGPS1-206ENST00000488594 PRNDQ9UKY0 176 aa13.96□□□□□ -0.18
GGPS1-206ENST00000488594 TRAV14DV4A0A0A6YYC5 116 aa13.95□□□□□ -0.18
GGPS1-206ENST00000488594 YIF1AO95070 293 aa13.95□□□□□ -0.18
GGPS1-206ENST00000488594 CA1P00915 261 aaPredicted RBP13.95□□□□□ -0.18
GGPS1-206ENST00000488594 HSPA13P48723 471 aa13.95□□□□□ -0.18
GGPS1-206ENST00000488594 UBE2UQ5VVX9 321 aa13.95□□□□□ -0.18
GGPS1-206ENST00000488594 FAM90A2PQ658T7 463 aa13.95□□□□□ -0.18
GGPS1-206ENST00000488594 DGCR14Q96DF8 476 aaKnown RBP13.95□□□□□ -0.18
GGPS1-206ENST00000488594 SLC25A38Q96DW6 304 aa13.95□□□□□ -0.18
GGPS1-206ENST00000488594 TXN2Q99757 166 aa13.95□□□□□ -0.18
GGPS1-206ENST00000488594 SSR3Q9UNL2 185 aa13.95□□□□□ -0.18
GGPS1-206ENST00000488594 C11orf94C9JXX5 98 aa13.94□□□□□ -0.18
GGPS1-206ENST00000488594 KRASP01116 189 aa13.94□□□□□ -0.18
GGPS1-206ENST00000488594 TMEM187Q14656 261 aa13.94□□□□□ -0.18
GGPS1-206ENST00000488594 TSPAN14Q8NG11 270 aa13.94□□□□□ -0.18
GGPS1-206ENST00000488594 HRH4Q9H3N8 390 aa13.94□□□□□ -0.18
GGPS1-206ENST00000488594 AUNIPQ9H7T9 357 aa13.94□□□□□ -0.18
GGPS1-206ENST00000488594 DIABLOQ9NR28 239 aa13.94□□□□□ -0.18
GGPS1-206ENST00000488594 IGKV3-7A0A075B6H7 116 aa13.93□□□□□ -0.18
GGPS1-206ENST00000488594 PGLYRP1O75594 196 aaPredicted RBP13.93□□□□□ -0.18
GGPS1-206ENST00000488594 DFFBO76075 338 aa13.93□□□□□ -0.18
GGPS1-206ENST00000488594 RLN1P04808 185 aa13.93□□□□□ -0.18
GGPS1-206ENST00000488594 MFAP4P55083 255 aa13.93□□□□□ -0.18
GGPS1-206ENST00000488594 GABARAPL2P60520 117 aa13.93□□□□□ -0.18
GGPS1-206ENST00000488594 FCAMRQ8WWV6 532 aa13.93□□□□□ -0.18
GGPS1-206ENST00000488594 FCGR1BQ92637 280 aa13.93□□□□□ -0.18
GGPS1-206ENST00000488594 SLC25A46Q96AG3 418 aa13.93□□□□□ -0.18
GGPS1-206ENST00000488594 TSC22D3Q99576 134 aa13.93□□□□□ -0.18
GGPS1-206ENST00000488594 NXF2Q9GZY0 626 aaKnown RBP13.93□□□□□ -0.18
GGPS1-206ENST00000488594 NSG2Q9Y328 171 aa13.93□□□□□ -0.18
GGPS1-206ENST00000488594 PCLOQ9Y6V0 5065 aa13.92□□□□□ -0.18
GGPS1-206ENST00000488594 IGHV3-49A0A0A0MS15 119 aa13.92□□□□□ -0.18
GGPS1-206ENST00000488594 C15orf61A6NNL5 157 aa13.92□□□□□ -0.18
GGPS1-206ENST00000488594 FCER2P06734 321 aa13.92□□□□□ -0.18
GGPS1-206ENST00000488594 PSMB9P28065 219 aa13.92□□□□□ -0.18
GGPS1-206ENST00000488594 SDC2P34741 201 aa13.92□□□□□ -0.18
GGPS1-206ENST00000488594 G6PCP35575 357 aa13.92□□□□□ -0.18
GGPS1-206ENST00000488594 LPAR6P43657 344 aa13.92□□□□□ -0.18
GGPS1-206ENST00000488594 DHRS11Q6UWP2 260 aa13.92□□□□□ -0.18
GGPS1-206ENST00000488594 CMTM1Q8IZ96 169 aa13.92□□□□□ -0.18
GGPS1-206ENST00000488594 GBGT1Q8N5D6 347 aa13.92□□□□□ -0.18
GGPS1-206ENST00000488594 OR5H6Q8NGV6 325 aa13.92□□□□□ -0.18
GGPS1-206ENST00000488594 ZNF414Q96IQ9 312 aa13.92□□□□□ -0.18
GGPS1-206ENST00000488594 GINS3Q9BRX5 216 aa13.92□□□□□ -0.18
GGPS1-206ENST00000488594 TMEM14BQ9NUH8 114 aa13.92□□□□□ -0.18
GGPS1-206ENST00000488594 DNAH10Q8IVF4 4471 aa13.92□□□□□ -0.18
GGPS1-206ENST00000488594 IGLL5B9A064 214 aa13.91□□□□□ -0.18
GGPS1-206ENST00000488594 EIF4EP06730 217 aaKnown RBP13.91□□□□□ -0.18
GGPS1-206ENST00000488594 TCF24Q7RTU0 167 aa13.91□□□□□ -0.18
GGPS1-206ENST00000488594 MOB3AQ96BX8 217 aa13.91□□□□□ -0.18
GGPS1-206ENST00000488594 MISP3Q96FF7 219 aa13.91□□□□□ -0.18
GGPS1-206ENST00000488594 EHFQ9NZC4 300 aa13.91□□□□□ -0.18
GGPS1-206ENST00000488594 APLNQ9ULZ1 77 aa13.91□□□□□ -0.18
GGPS1-206ENST00000488594 HECTD4Q9Y4D8 3996 aa13.9□□□□□ -0.18
GGPS1-206ENST00000488594 TRAV2A0A0B4J234 112 aa13.9□□□□□ -0.18
GGPS1-206ENST00000488594 I3L2K1 104 aa13.9□□□□□ -0.18
GGPS1-206ENST00000488594 DEFB4AO15263 64 aa13.9□□□□□ -0.18
GGPS1-206ENST00000488594 IDNKQ5T6J7 187 aa13.9□□□□□ -0.18
GGPS1-206ENST00000488594 IZUMO2Q6UXV1 221 aa13.9□□□□□ -0.18
GGPS1-206ENST00000488594 LINC00336Q6ZUF6 198 aa13.9□□□□□ -0.18
GGPS1-206ENST00000488594 IFT46Q9NQC8 304 aa13.9□□□□□ -0.18
GGPS1-206ENST00000488594 ANKRD65E5RJM6 399 aa13.89□□□□□ -0.19
GGPS1-206ENST00000488594 GNG7O60262 68 aa13.89□□□□□ -0.19
GGPS1-206ENST00000488594 MXD1Q05195 221 aa13.89□□□□□ -0.19
GGPS1-206ENST00000488594 TMEM41BQ5BJD5 291 aa13.89□□□□□ -0.19
GGPS1-206ENST00000488594 SPARTQ8N0X7 666 aa13.89□□□□□ -0.19
GGPS1-206ENST00000488594 ZNF114Q8NC26 417 aa13.89□□□□□ -0.19
GGPS1-206ENST00000488594 ZNF2Q9BSG1 426 aaPredicted RBP13.89□□□□□ -0.19
GGPS1-206ENST00000488594 IGHV3OR16-13A0A075B7E8 117 aa13.88□□□□□ -0.19
GGPS1-206ENST00000488594 IGHV3-74A0A0B4J1X5 117 aa13.88□□□□□ -0.19
GGPS1-206ENST00000488594 DNASE2O00115 360 aaPredicted RBP13.88□□□□□ -0.19
GGPS1-206ENST00000488594 TMEM127O75204 238 aa13.88□□□□□ -0.19
GGPS1-206ENST00000488594 MT-CO2P00403 227 aa13.88□□□□□ -0.19
GGPS1-206ENST00000488594 DEFB131AP59861 70 aa13.88□□□□□ -0.19
GGPS1-206ENST00000488594 Q8NAQ8 132 aa13.88□□□□□ -0.19
GGPS1-206ENST00000488594 MS4A6AQ9H2W1 248 aa13.88□□□□□ -0.19
GGPS1-206ENST00000488594 VSIRQ9H7M9 311 aa13.88□□□□□ -0.19
GGPS1-206ENST00000488594 DBX1A6NMT0 343 aa13.87□□□□□ -0.19
GGPS1-206ENST00000488594 GPR31O00270 319 aa13.87□□□□□ -0.19
GGPS1-206ENST00000488594 ST8SIA3O43173 380 aa13.87□□□□□ -0.19
GGPS1-206ENST00000488594 CLEC2LP0C7M8 214 aa13.87□□□□□ -0.19
GGPS1-206ENST00000488594 TAS2R46P59540 309 aa13.87□□□□□ -0.19
GGPS1-206ENST00000488594 LEMD1Q68G75 181 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms