RNA–Protein interactions for RNA: ENST00000488149.5

MCF2L2-212, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 2

Gene MCF2L2, Length 7,813 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-212ENST00000488149 RPL39P5Q59GN2 51 aa6.97□□□□□ -1.29
MCF2L2-212ENST00000488149 RNASEH2CQ8TDP1 164 aaKnown RBP6.97□□□□□ -1.29
MCF2L2-212ENST00000488149 DOCK4Q8N1I0 1966 aa6.97□□□□□ -1.29
MCF2L2-212ENST00000488149 GREB1Q4ZG55 1949 aa6.97□□□□□ -1.29
MCF2L2-212ENST00000488149 PRR33A8MZF0 331 aa6.97□□□□□ -1.29
MCF2L2-212ENST00000488149 UBE2L6O14933 153 aa6.97□□□□□ -1.29
MCF2L2-212ENST00000488149 NAPSAO96009 420 aa6.97□□□□□ -1.29
MCF2L2-212ENST00000488149 DOCK3Q8IZD9 2030 aa6.97□□□□□ -1.29
MCF2L2-212ENST00000488149 A0A1W2PRE2 83 aa6.97□□□□□ -1.29
MCF2L2-212ENST00000488149 UBE2V1Q13404 147 aa6.97□□□□□ -1.29
MCF2L2-212ENST00000488149 PAQR4Q8N4S7 273 aaPredicted RBP6.97□□□□□ -1.29
MCF2L2-212ENST00000488149 ZNF703Q9H7S9 590 aaPredicted RBP6.97□□□□□ -1.29
MCF2L2-212ENST00000488149 PARP14Q460N5 1801 aa6.97□□□□□ -1.29
MCF2L2-212ENST00000488149 NRN1LQ496H8 165 aa6.97□□□□□ -1.29
MCF2L2-212ENST00000488149 SSBP4Q9BWG4 385 aaPredicted RBP6.97□□□□□ -1.29
MCF2L2-212ENST00000488149 COL5A3P25940 1745 aaPredicted RBP6.97□□□□□ -1.29
MCF2L2-212ENST00000488149 TRAV24A0A0B4J272 114 aa6.97□□□□□ -1.29
MCF2L2-212ENST00000488149 FOXI3A8MTJ6 420 aaPredicted RBP6.97□□□□□ -1.29
MCF2L2-212ENST00000488149 HBDP02042 147 aa6.97□□□□□ -1.29
MCF2L2-212ENST00000488149 TSPOP30536 169 aa6.97□□□□□ -1.29
MCF2L2-212ENST00000488149 TIMP3P35625 211 aa6.97□□□□□ -1.29
MCF2L2-212ENST00000488149 DYNLRB2Q8TF09 96 aa6.97□□□□□ -1.29
MCF2L2-212ENST00000488149 RALGAPA2Q2PPJ7 1873 aa6.97□□□□□ -1.29
MCF2L2-212ENST00000488149 AHRRA9YTQ3 701 aa6.97□□□□□ -1.29
MCF2L2-212ENST00000488149 ATP5L2Q7Z4Y8 100 aa6.97□□□□□ -1.29
MCF2L2-212ENST00000488149 LHFPL1Q86WI0 220 aa6.97□□□□□ -1.29
MCF2L2-212ENST00000488149 TEX45Q8NA69 505 aa6.97□□□□□ -1.29
MCF2L2-212ENST00000488149 CCL1P22362 96 aa6.96□□□□□ -1.29
MCF2L2-212ENST00000488149 GDF15Q99988 308 aa6.96□□□□□ -1.29
MCF2L2-212ENST00000488149 UBR3Q6ZT12 1888 aa6.96□□□□□ -1.29
MCF2L2-212ENST00000488149 ZNF831Q5JPB2 1677 aa6.96□□□□□ -1.29
MCF2L2-212ENST00000488149 ACTL10Q5JWF8 245 aa6.96□□□□□ -1.29
MCF2L2-212ENST00000488149 PEAR1Q5VY43 1037 aaPredicted RBP6.96□□□□□ -1.29
MCF2L2-212ENST00000488149 SHISA5Q8N114 240 aa6.96□□□□□ -1.29
MCF2L2-212ENST00000488149 OR9G4Q8NGQ1 327 aa6.96□□□□□ -1.29
MCF2L2-212ENST00000488149 C1QTNF5Q9BXJ0 243 aa6.96□□□□□ -1.29
MCF2L2-212ENST00000488149 MOB4Q9Y3A3 225 aa6.96□□□□□ -1.29
MCF2L2-212ENST00000488149 CTSBP07858 339 aa6.96□□□□□ -1.3
MCF2L2-212ENST00000488149 UMODP07911 640 aa6.96□□□□□ -1.3
MCF2L2-212ENST00000488149 TFF2Q03403 129 aa6.96□□□□□ -1.3
MCF2L2-212ENST00000488149 SAMD5Q5TGI4 173 aa6.96□□□□□ -1.3
MCF2L2-212ENST00000488149 UNQ5815/PRO19632Q6UWF5 114 aa6.96□□□□□ -1.3
MCF2L2-212ENST00000488149 ACP7Q6ZNF0 438 aa6.96□□□□□ -1.3
MCF2L2-212ENST00000488149 FER1L6-AS1Q8NA97 138 aa6.96□□□□□ -1.3
MCF2L2-212ENST00000488149 FSCN3Q9NQT6 498 aa6.96□□□□□ -1.3
MCF2L2-212ENST00000488149 SRSF4Q08170 494 aaKnown RBP6.96□□□□□ -1.3
MCF2L2-212ENST00000488149 ZNF56Q15929 161 aa6.96□□□□□ -1.3
MCF2L2-212ENST00000488149 NPIPB11E5RHQ5 1161 aa6.96□□□□□ -1.3
MCF2L2-212ENST00000488149 ZNF664Q8N3J9 261 aa6.96□□□□□ -1.3
MCF2L2-212ENST00000488149 REPIN1Q9BWE0 567 aaKnown RBP6.96□□□□□ -1.3
MCF2L2-212ENST00000488149 NYNRINQ9P2P1 1898 aaKnown RBP6.96□□□□□ -1.3
MCF2L2-212ENST00000488149 IGKV1D-13A0A0B4J2D9 117 aa6.96□□□□□ -1.3
MCF2L2-212ENST00000488149 PRR32B1ATL7 298 aa6.96□□□□□ -1.3
MCF2L2-212ENST00000488149 IGKV1-13P0DP09 117 aa6.96□□□□□ -1.3
MCF2L2-212ENST00000488149 TRIP6Q15654 476 aaKnown RBP6.96□□□□□ -1.3
MCF2L2-212ENST00000488149 MRAP2Q96G30 205 aa6.96□□□□□ -1.3
MCF2L2-212ENST00000488149 Q9H3A6 140 aa6.96□□□□□ -1.3
MCF2L2-212ENST00000488149 DPM2O94777 84 aa6.95□□□□□ -1.3
MCF2L2-212ENST00000488149 ZNF585BQ52M93 769 aa6.95□□□□□ -1.3
MCF2L2-212ENST00000488149 C1orf210Q8IVY1 113 aa6.95□□□□□ -1.3
MCF2L2-212ENST00000488149 CEP250Q9BV73 2442 aa6.95□□□□□ -1.3
MCF2L2-212ENST00000488149 GZMBP10144 247 aa6.95□□□□□ -1.3
MCF2L2-212ENST00000488149 SFTPCP11686 197 aa6.95□□□□□ -1.3
MCF2L2-212ENST00000488149 NPPCP23582 126 aa6.95□□□□□ -1.3
MCF2L2-212ENST00000488149 SUPT4H1P63272 117 aaKnown RBP6.95□□□□□ -1.3
MCF2L2-212ENST00000488149 HS3ST3B1Q9Y662 390 aa6.95□□□□□ -1.3
MCF2L2-212ENST00000488149 LINC00271P0C7V0 271 aa6.95□□□□□ -1.3
MCF2L2-212ENST00000488149 GAGE13Q4V321 117 aa6.95□□□□□ -1.3
MCF2L2-212ENST00000488149 C1orf185Q5T7R7 199 aa6.95□□□□□ -1.3
MCF2L2-212ENST00000488149 FAM159AQ6UWV7 190 aa6.95□□□□□ -1.3
MCF2L2-212ENST00000488149 AGMATQ9BSE5 352 aa6.95□□□□□ -1.3
MCF2L2-212ENST00000488149 NDUFA3O95167 84 aa6.95□□□□□ -1.3
MCF2L2-212ENST00000488149 LYPD3O95274 346 aa6.95□□□□□ -1.3
MCF2L2-212ENST00000488149 LEPP41159 167 aa6.95□□□□□ -1.3
MCF2L2-212ENST00000488149 RASL11AQ6T310 242 aa6.95□□□□□ -1.3
MCF2L2-212ENST00000488149 ZNF479Q96JC4 524 aa6.95□□□□□ -1.3
MCF2L2-212ENST00000488149 GREB1LQ9C091 1923 aaPredicted RBP6.95□□□□□ -1.3
MCF2L2-212ENST00000488149 IGKV1-9A0A0C4DH69 117 aa6.95□□□□□ -1.3
MCF2L2-212ENST00000488149 TM4SF5O14894 197 aa6.95□□□□□ -1.3
MCF2L2-212ENST00000488149 PPBPP02775 128 aa6.95□□□□□ -1.3
MCF2L2-212ENST00000488149 RNASE1P07998 156 aaKnown RBP6.95□□□□□ -1.3
MCF2L2-212ENST00000488149 CD55P08174 381 aa6.95□□□□□ -1.3
MCF2L2-212ENST00000488149 ERVK11-1P61568 191 aa6.95□□□□□ -1.3
MCF2L2-212ENST00000488149 DDB2Q92466 427 aa6.95□□□□□ -1.3
MCF2L2-212ENST00000488149 COQ2Q96H96 371 aa6.95□□□□□ -1.3
MCF2L2-212ENST00000488149 LPAR2Q9HBW0 351 aa6.95□□□□□ -1.3
MCF2L2-212ENST00000488149 NXT2Q9NPJ8 142 aaKnown RBP6.95□□□□□ -1.3
MCF2L2-212ENST00000488149 CYSLTR1Q9Y271 337 aa6.95□□□□□ -1.3
MCF2L2-212ENST00000488149 A0A087WV48 116 aa6.95□□□□□ -1.3
MCF2L2-212ENST00000488149 MST1P26927 711 aa6.95□□□□□ -1.3
MCF2L2-212ENST00000488149 FADS6Q8N9I5 356 aa6.95□□□□□ -1.3
MCF2L2-212ENST00000488149 TSKUQ8WUA8 353 aa6.95□□□□□ -1.3
MCF2L2-212ENST00000488149 SLC25A2Q9BXI2 301 aa6.95□□□□□ -1.3
MCF2L2-212ENST00000488149 CLEC7AQ9BXN2 247 aa6.95□□□□□ -1.3
MCF2L2-212ENST00000488149 HEATR1Q9H583 2144 aaKnown RBP6.95□□□□□ -1.3
MCF2L2-212ENST00000488149 OTORQ9NRC9 128 aa6.95□□□□□ -1.3
MCF2L2-212ENST00000488149 A8MWP6 167 aa6.94□□□□□ -1.3
MCF2L2-212ENST00000488149 HOXA3O43365 443 aaPredicted RBP6.94□□□□□ -1.3
MCF2L2-212ENST00000488149 LINC01559Q495D7 138 aa6.94□□□□□ -1.3
MCF2L2-212ENST00000488149 FAM74A4Q5TZK3 123 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms