RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 LPCAT4Q643R3 524 aa0.72□□□□□ -2.29
R3HDM1-219ENST00000488035 PPP1R2P1Q96PQ5 205 aa0.72□□□□□ -2.29
R3HDM1-219ENST00000488035 DERL1Q9BUN8 251 aa0.72□□□□□ -2.29
R3HDM1-219ENST00000488035 WDR61Q9GZS3 305 aaKnown RBP0.72□□□□□ -2.29
R3HDM1-219ENST00000488035 FAM96AQ9H5X1 160 aa0.72□□□□□ -2.29
R3HDM1-219ENST00000488035 STRCQ7RTU9 1775 aa0.72□□□□□ -2.29
R3HDM1-219ENST00000488035 MUC16Q8WXI7 14507 aa0.72□□□□□ -2.29
R3HDM1-219ENST00000488035 MAP3K5Q99683 1374 aa0.71□□□□□ -2.3
R3HDM1-219ENST00000488035 NCOA6Q14686 2063 aaPredicted RBP0.71□□□□□ -2.3
R3HDM1-219ENST00000488035 TTC21AQ8NDW8 1320 aa0.71□□□□□ -2.3
R3HDM1-219ENST00000488035 IRGMA1A4Y4 181 aa0.71□□□□□ -2.3
R3HDM1-219ENST00000488035 SDCBPO00560 298 aaPredicted RBP0.71□□□□□ -2.3
R3HDM1-219ENST00000488035 NOS1APO75052 506 aaPredicted RBP0.71□□□□□ -2.3
R3HDM1-219ENST00000488035 DCTN3O75935 186 aa0.71□□□□□ -2.3
R3HDM1-219ENST00000488035 OR5G3P0C626 314 aa0.71□□□□□ -2.3
R3HDM1-219ENST00000488035 ARL14EPLP0DKL9 152 aa0.71□□□□□ -2.3
R3HDM1-219ENST00000488035 HIST1H1EP10412 219 aaKnown RBP0.71□□□□□ -2.3
R3HDM1-219ENST00000488035 ZNF80P51504 273 aaPredicted RBP0.71□□□□□ -2.3
R3HDM1-219ENST00000488035 FXYD2P54710 66 aa0.71□□□□□ -2.3
R3HDM1-219ENST00000488035 RPS20P60866 119 aaKnown RBP0.71□□□□□ -2.3
R3HDM1-219ENST00000488035 RUNX1Q01196 453 aa0.71□□□□□ -2.3
R3HDM1-219ENST00000488035 OR2F1Q13607 317 aa0.71□□□□□ -2.3
R3HDM1-219ENST00000488035 ZNF846Q147U1 533 aa0.71□□□□□ -2.3
R3HDM1-219ENST00000488035 IBA57Q5T440 356 aaKnown RBP0.71□□□□□ -2.3
R3HDM1-219ENST00000488035 Q6ZS49 121 aa0.71□□□□□ -2.3
R3HDM1-219ENST00000488035 C1orf158Q8N1D5 194 aa0.71□□□□□ -2.3
R3HDM1-219ENST00000488035 REG4Q9BYZ8 158 aa0.71□□□□□ -2.3
R3HDM1-219ENST00000488035 GUCA1BQ9UMX6 200 aa0.71□□□□□ -2.3
R3HDM1-219ENST00000488035 LSM5Q9Y4Y9 91 aaKnown RBP0.71□□□□□ -2.3
R3HDM1-219ENST00000488035 SOX21Q9Y651 276 aaPredicted RBP0.71□□□□□ -2.3
R3HDM1-219ENST00000488035 ALPK2Q86TB3 2170 aa0.71□□□□□ -2.3
R3HDM1-219ENST00000488035 HECW1Q76N89 1606 aa0.71□□□□□ -2.3
R3HDM1-219ENST00000488035 DOCK5Q9H7D0 1870 aa0.7□□□□□ -2.3
R3HDM1-219ENST00000488035 IGKV1D-42A0A075B6H8 117 aa0.7□□□□□ -2.3
R3HDM1-219ENST00000488035 F8W036 122 aa0.7□□□□□ -2.3
R3HDM1-219ENST00000488035 FAAHO00519 579 aa0.7□□□□□ -2.3
R3HDM1-219ENST00000488035 CRYGAP11844 174 aa0.7□□□□□ -2.3
R3HDM1-219ENST00000488035 RNASE3P12724 160 aaKnown RBP0.7□□□□□ -2.3
R3HDM1-219ENST00000488035 SPCS3P61009 180 aa0.7□□□□□ -2.3
R3HDM1-219ENST00000488035 KCNJ8Q15842 424 aa0.7□□□□□ -2.3
R3HDM1-219ENST00000488035 LCN15Q6UWW0 184 aa0.7□□□□□ -2.3
R3HDM1-219ENST00000488035 BPIFA4PQ86YQ2 179 aa0.7□□□□□ -2.3
R3HDM1-219ENST00000488035 MRPS26Q9BYN8 205 aaKnown RBP0.7□□□□□ -2.3
R3HDM1-219ENST00000488035 C11orf68Q9H3H3 251 aaKnown RBP0.7□□□□□ -2.3
R3HDM1-219ENST00000488035 NOSIPQ9Y314 301 aaKnown RBP0.7□□□□□ -2.3
R3HDM1-219ENST00000488035 WRNQ14191 1432 aaPredicted RBP eCLIP0.7□□□□□ -2.3
R3HDM1-219ENST00000488035 ROS1P08922 2347 aa0.7□□□□□ -2.3
R3HDM1-219ENST00000488035 HECW2Q9P2P5 1572 aa0.7□□□□□ -2.3
R3HDM1-219ENST00000488035 ADCY9O60503 1353 aa0.7□□□□□ -2.3
R3HDM1-219ENST00000488035 MTUS2Q5JR59 1369 aa0.7□□□□□ -2.3
R3HDM1-219ENST00000488035 SNAPC4Q5SXM2 1469 aa0.69□□□□□ -2.3
R3HDM1-219ENST00000488035 IGKV3-7A0A075B6H7 116 aa0.69□□□□□ -2.3
R3HDM1-219ENST00000488035 IGKV2-40A0A087WW87 121 aaPredicted RBP0.69□□□□□ -2.3
R3HDM1-219ENST00000488035 HCRTO43612 131 aa0.69□□□□□ -2.3
R3HDM1-219ENST00000488035 NIPSNAP2O75323 286 aa0.69□□□□□ -2.3
R3HDM1-219ENST00000488035 AHSA1O95433 338 aa0.69□□□□□ -2.3
R3HDM1-219ENST00000488035 IGKV2D-40P01614 121 aaPredicted RBP0.69□□□□□ -2.3
R3HDM1-219ENST00000488035 HLA-DRB1P01911 266 aa0.69□□□□□ -2.3
R3HDM1-219ENST00000488035 HIST1H1TP22492 207 aaPredicted RBP0.69□□□□□ -2.3
R3HDM1-219ENST00000488035 HIST1H2BOP23527 126 aa0.69□□□□□ -2.3
R3HDM1-219ENST00000488035 FKBP2P26885 142 aaKnown RBP0.69□□□□□ -2.3
R3HDM1-219ENST00000488035 HIST1H2BBP33778 126 aa0.69□□□□□ -2.3
R3HDM1-219ENST00000488035 RPL5P46777 297 aaKnown RBP0.69□□□□□ -2.3
R3HDM1-219ENST00000488035 HIST1H2BDP58876 126 aa0.69□□□□□ -2.3
R3HDM1-219ENST00000488035 MAGOHP61326 146 aaKnown RBP0.69□□□□□ -2.3
R3HDM1-219ENST00000488035 HIST1H2BCP62807 126 aa0.69□□□□□ -2.3
R3HDM1-219ENST00000488035 HBA1P69905 142 aa0.69□□□□□ -2.3
R3HDM1-219ENST00000488035 HIST2H2BEQ16778 126 aa0.69□□□□□ -2.3
R3HDM1-219ENST00000488035 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.69□□□□□ -2.3
R3HDM1-219ENST00000488035 Q6ZQT0 140 aa0.69□□□□□ -2.3
R3HDM1-219ENST00000488035 IQCF2Q8IXL9 164 aa0.69□□□□□ -2.3
R3HDM1-219ENST00000488035 MRPL30Q8TCC3 161 aaKnown RBP0.69□□□□□ -2.3
R3HDM1-219ENST00000488035 RASSF5Q8WWW0 418 aa0.69□□□□□ -2.3
R3HDM1-219ENST00000488035 C11orf40Q8WZ69 217 aa0.69□□□□□ -2.3
R3HDM1-219ENST00000488035 HIST1H2BHQ93079 126 aa0.69□□□□□ -2.3
R3HDM1-219ENST00000488035 HIST1H2BNQ99877 126 aa0.69□□□□□ -2.3
R3HDM1-219ENST00000488035 HIST1H2BMQ99879 126 aa0.69□□□□□ -2.3
R3HDM1-219ENST00000488035 FBXL12Q9NXK8 326 aa0.69□□□□□ -2.3
R3HDM1-219ENST00000488035 CACNA1BQ00975 2339 aa0.69□□□□□ -2.3
R3HDM1-219ENST00000488035 EXPH5Q8NEV8 1989 aa0.68□□□□□ -2.3
R3HDM1-219ENST00000488035 A0A1B0GV50 99 aa0.68□□□□□ -2.3
R3HDM1-219ENST00000488035 CHP2O43745 196 aa0.68□□□□□ -2.3
R3HDM1-219ENST00000488035 LYPLA2O95372 231 aa0.68□□□□□ -2.3
R3HDM1-219ENST00000488035 CTSDP07339 412 aaPredicted RBP0.68□□□□□ -2.3
R3HDM1-219ENST00000488035 METTL15P1P0C7V9 234 aa0.68□□□□□ -2.3
R3HDM1-219ENST00000488035 NFYAP23511 347 aaPredicted RBP0.68□□□□□ -2.3
R3HDM1-219ENST00000488035 G6PCP35575 357 aa0.68□□□□□ -2.3
R3HDM1-219ENST00000488035 SNRPD2P62316 118 aaKnown RBP0.68□□□□□ -2.3
R3HDM1-219ENST00000488035 HIST3H3Q16695 136 aa0.68□□□□□ -2.3
R3HDM1-219ENST00000488035 NDUFA5Q16718 116 aa0.68□□□□□ -2.3
R3HDM1-219ENST00000488035 IMPG1Q17R60 797 aa0.68□□□□□ -2.3
R3HDM1-219ENST00000488035 ACOT6Q3I5F7 207 aaPredicted RBP0.68□□□□□ -2.3
R3HDM1-219ENST00000488035 C10orf55Q5SWW7 151 aa0.68□□□□□ -2.3
R3HDM1-219ENST00000488035 DCXRQ7Z4W1 244 aa0.68□□□□□ -2.3
R3HDM1-219ENST00000488035 CLVS1Q8IUQ0 354 aaPredicted RBP0.68□□□□□ -2.3
R3HDM1-219ENST00000488035 WFDC11Q8NEX6 87 aa0.68□□□□□ -2.3
R3HDM1-219ENST00000488035 OR52R1Q8NGF1 315 aa0.68□□□□□ -2.3
R3HDM1-219ENST00000488035 TERB2Q8NHR7 220 aa0.68□□□□□ -2.3
R3HDM1-219ENST00000488035 PFN4Q8NHR9 129 aa0.68□□□□□ -2.3
R3HDM1-219ENST00000488035 TMEM106AQ96A25 262 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms