RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 APRG1Q8IVJ8 170 aa3.07□□□□□ -1.92
BRCA1-217ENST00000487825 STHQ8IWL8 128 aa3.07□□□□□ -1.92
BRCA1-217ENST00000487825 CT45A3Q8NHU0 189 aa3.07□□□□□ -1.92
BRCA1-217ENST00000487825 OTOSQ8NHW6 89 aa3.07□□□□□ -1.92
BRCA1-217ENST00000487825 GRPEL2Q8TAA5 225 aa3.07□□□□□ -1.92
BRCA1-217ENST00000487825 LRRC20Q8TCA0 184 aa3.07□□□□□ -1.92
BRCA1-217ENST00000487825 GHSRQ92847 366 aa3.07□□□□□ -1.92
BRCA1-217ENST00000487825 MARC2Q969Z3 335 aa3.07□□□□□ -1.92
BRCA1-217ENST00000487825 PINX1Q96BK5 328 aaKnown RBP3.07□□□□□ -1.92
BRCA1-217ENST00000487825 SLC29A1Q99808 456 aa3.07□□□□□ -1.92
BRCA1-217ENST00000487825 C5orf66Q9H5L9 145 aa3.07□□□□□ -1.92
BRCA1-217ENST00000487825 FNDC4Q9H6D8 234 aaPredicted RBP3.07□□□□□ -1.92
BRCA1-217ENST00000487825 RAB9BQ9NP90 201 aa3.07□□□□□ -1.92
BRCA1-217ENST00000487825 ANAPC11Q9NYG5 84 aa3.07□□□□□ -1.92
BRCA1-217ENST00000487825 CRCT1Q9UGL9 99 aa3.07□□□□□ -1.92
BRCA1-217ENST00000487825 NUFIP1Q9UHK0 495 aaKnown RBP3.07□□□□□ -1.92
BRCA1-217ENST00000487825 TBC1D24Q9ULP9 559 aa3.07□□□□□ -1.92
BRCA1-217ENST00000487825 CDH10Q9Y6N8 788 aa3.07□□□□□ -1.92
BRCA1-217ENST00000487825 FSIP2Q5CZC0 6907 aa3.07□□□□□ -1.92
BRCA1-217ENST00000487825 IGHV3-43A0A0B4J1X8 118 aa3.06□□□□□ -1.92
BRCA1-217ENST00000487825 TRAV39A0A0B4J263 110 aa3.06□□□□□ -1.92
BRCA1-217ENST00000487825 IGKV1-12A0A0C4DH73 117 aa3.06□□□□□ -1.92
BRCA1-217ENST00000487825 A0A1B0GTI1 187 aa3.06□□□□□ -1.92
BRCA1-217ENST00000487825 FAM223BA6NKX1 122 aa3.06□□□□□ -1.92
BRCA1-217ENST00000487825 DEGS1O15121 323 aa3.06□□□□□ -1.92
BRCA1-217ENST00000487825 SLC22A1O15245 554 aa3.06□□□□□ -1.92
BRCA1-217ENST00000487825 GGCTO75223 188 aaKnown RBP3.06□□□□□ -1.92
BRCA1-217ENST00000487825 GATBO75879 557 aaKnown RBP3.06□□□□□ -1.92
BRCA1-217ENST00000487825 IFNA5P01569 189 aa3.06□□□□□ -1.92
BRCA1-217ENST00000487825 IGKV1D-12P01611 117 aa3.06□□□□□ -1.92
BRCA1-217ENST00000487825 HLA-AP01891 365 aaKnown RBP3.06□□□□□ -1.92
BRCA1-217ENST00000487825 CRYGBP07316 175 aa3.06□□□□□ -1.92
BRCA1-217ENST00000487825 IGHV3-43DP0DP04 118 aa3.06□□□□□ -1.92
BRCA1-217ENST00000487825 FUT3P21217 361 aa3.06□□□□□ -1.92
BRCA1-217ENST00000487825 NPY1RP25929 384 aa3.06□□□□□ -1.92
BRCA1-217ENST00000487825 KDELR2P33947 212 aa3.06□□□□□ -1.92
BRCA1-217ENST00000487825 LGALS7P47929 136 aa3.06□□□□□ -1.92
BRCA1-217ENST00000487825 KCNJ3P48549 501 aa3.06□□□□□ -1.92
BRCA1-217ENST00000487825 BCAP31P51572 246 aa3.06□□□□□ -1.92
BRCA1-217ENST00000487825 RAB11AP62491 216 aa3.06□□□□□ -1.92
BRCA1-217ENST00000487825 STX3Q13277 289 aa3.06□□□□□ -1.92
BRCA1-217ENST00000487825 GPR176Q14439 515 aa3.06□□□□□ -1.92
BRCA1-217ENST00000487825 FXYD3Q14802 87 aa3.06□□□□□ -1.92
BRCA1-217ENST00000487825 CDK5R1Q15078 307 aa3.06□□□□□ -1.92
BRCA1-217ENST00000487825 RAB11BQ15907 218 aa3.06□□□□□ -1.92
BRCA1-217ENST00000487825 SMUG1Q53HV7 270 aa3.06□□□□□ -1.92
BRCA1-217ENST00000487825 PAN3Q58A45 887 aaKnown RBP3.06□□□□□ -1.92
BRCA1-217ENST00000487825 MUC21Q5SSG8 566 aa3.06□□□□□ -1.92
BRCA1-217ENST00000487825 MORN3Q6PF18 240 aaPredicted RBP3.06□□□□□ -1.92
BRCA1-217ENST00000487825 TMEM179BQ7Z7N9 219 aa3.06□□□□□ -1.92
BRCA1-217ENST00000487825 CYP4Z1Q86W10 505 aa3.06□□□□□ -1.92
BRCA1-217ENST00000487825 FAM223AQ8IWN6 122 aa3.06□□□□□ -1.92
BRCA1-217ENST00000487825 OR1L1Q8NH94 360 aa3.06□□□□□ -1.92
BRCA1-217ENST00000487825 PLPPR1Q8TBJ4 325 aa3.06□□□□□ -1.92
BRCA1-217ENST00000487825 GIPC3Q8TF64 312 aa3.06□□□□□ -1.92
BRCA1-217ENST00000487825 THEM6Q8WUY1 208 aa3.06□□□□□ -1.92
BRCA1-217ENST00000487825 GGHQ92820 318 aa3.06□□□□□ -1.92
BRCA1-217ENST00000487825 BORCS8Q96FH0 119 aa3.06□□□□□ -1.92
BRCA1-217ENST00000487825 CLCC1Q96S66 551 aa3.06□□□□□ -1.92
BRCA1-217ENST00000487825 TMEM70Q9BUB7 260 aa3.06□□□□□ -1.92
BRCA1-217ENST00000487825 C9orf16Q9BUW7 83 aa3.06□□□□□ -1.92
BRCA1-217ENST00000487825 CHST5Q9GZS9 411 aa3.06□□□□□ -1.92
BRCA1-217ENST00000487825 RHOFQ9HBH0 211 aa3.06□□□□□ -1.92
BRCA1-217ENST00000487825 FKBP14Q9NWM8 211 aa3.06□□□□□ -1.92
BRCA1-217ENST00000487825 COA4Q9NYJ1 87 aa3.06□□□□□ -1.92
BRCA1-217ENST00000487825 METTL1Q9UBP6 276 aaKnown RBP3.06□□□□□ -1.92
BRCA1-217ENST00000487825 LPAP08519 4548 aa3.05□□□□□ -1.92
BRCA1-217ENST00000487825 TRBV9A0A0B4J1U6 114 aa3.05□□□□□ -1.92
BRCA1-217ENST00000487825 A0A1B0GW64 132 aa3.05□□□□□ -1.92
BRCA1-217ENST00000487825 OR4C46A6NHA9 309 aa3.05□□□□□ -1.92
BRCA1-217ENST00000487825 SNTNA6NMZ2 147 aa3.05□□□□□ -1.92
BRCA1-217ENST00000487825 H0YJX3 145 aa3.05□□□□□ -1.92
BRCA1-217ENST00000487825 GIG44P09565 113 aaPredicted RBP3.05□□□□□ -1.92
BRCA1-217ENST00000487825 P0C879 139 aa3.05□□□□□ -1.92
BRCA1-217ENST00000487825 GZMHP20718 246 aa3.05□□□□□ -1.92
BRCA1-217ENST00000487825 CCL1P22362 96 aa3.05□□□□□ -1.92
BRCA1-217ENST00000487825 GSSP48637 474 aa3.05□□□□□ -1.92
BRCA1-217ENST00000487825 FHITP49789 147 aa3.05□□□□□ -1.92
BRCA1-217ENST00000487825 RBP2P50120 134 aa3.05□□□□□ -1.92
BRCA1-217ENST00000487825 CRISP1P54107 249 aa3.05□□□□□ -1.92
BRCA1-217ENST00000487825 ARPC4P59998 168 aa3.05□□□□□ -1.92
BRCA1-217ENST00000487825 SEC61GP60059 68 aa3.05□□□□□ -1.92
BRCA1-217ENST00000487825 RHOGP84095 191 aa3.05□□□□□ -1.92
BRCA1-217ENST00000487825 CKAP4Q07065 602 aaKnown RBP3.05□□□□□ -1.92
BRCA1-217ENST00000487825 FGL1Q08830 312 aa3.05□□□□□ -1.92
BRCA1-217ENST00000487825 MED21Q13503 144 aa3.05□□□□□ -1.92
BRCA1-217ENST00000487825 TIMM50Q3ZCQ8 353 aa3.05□□□□□ -1.92
BRCA1-217ENST00000487825 SLC22A6Q4U2R8 563 aa3.05□□□□□ -1.92
BRCA1-217ENST00000487825 TTC32Q5I0X7 151 aa3.05□□□□□ -1.92
BRCA1-217ENST00000487825 SAPCD1Q5SSQ6 148 aa3.05□□□□□ -1.92
BRCA1-217ENST00000487825 LIPKQ5VXJ0 399 aa3.05□□□□□ -1.92
BRCA1-217ENST00000487825 Q6ZRN7 208 aaPredicted RBP3.05□□□□□ -1.92
BRCA1-217ENST00000487825 ZNF833PQ6ZTB9 187 aa3.05□□□□□ -1.92
BRCA1-217ENST00000487825 SSX9Q7RTT3 188 aa3.05□□□□□ -1.92
BRCA1-217ENST00000487825 OR1B1Q8NGR6 318 aa3.05□□□□□ -1.92
BRCA1-217ENST00000487825 ARL11Q969Q4 196 aa3.05□□□□□ -1.92
BRCA1-217ENST00000487825 SULT4A1Q9BR01 284 aa3.05□□□□□ -1.92
BRCA1-217ENST00000487825 ROPN1BQ9BZX4 212 aaPredicted RBP3.05□□□□□ -1.92
BRCA1-217ENST00000487825 NKIRAS1Q9NYS0 192 aa3.05□□□□□ -1.92
BRCA1-217ENST00000487825 TAS2R1Q9NYW7 299 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms