RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 P0C879 139 aa10.22□□□□□ -0.77
HSPG2-211ENST00000486901 IGHV1-2P23083 117 aa10.22□□□□□ -0.77
HSPG2-211ENST00000486901 REG1BP48304 166 aa10.22□□□□□ -0.77
HSPG2-211ENST00000486901 MORN5Q5VZ52 161 aa10.22□□□□□ -0.77
HSPG2-211ENST00000486901 LYG1Q8N1E2 194 aa10.22□□□□□ -0.77
HSPG2-211ENST00000486901 YPEL2Q96QA6 119 aa10.22□□□□□ -0.77
HSPG2-211ENST00000486901 ZNF355PQ9NSJ1 428 aa10.22□□□□□ -0.77
HSPG2-211ENST00000486901 SPRR3Q9UBC9 169 aa10.22□□□□□ -0.77
HSPG2-211ENST00000486901 SPAARA0A1B0GVQ0 90 aa10.21□□□□□ -0.77
HSPG2-211ENST00000486901 SPINT2O43291 252 aa10.21□□□□□ -0.77
HSPG2-211ENST00000486901 PTTG1IPP53801 180 aa10.21□□□□□ -0.77
HSPG2-211ENST00000486901 FOXA3P55318 350 aaPredicted RBP10.21□□□□□ -0.77
HSPG2-211ENST00000486901 WDR82Q6UXN9 313 aa10.21□□□□□ -0.77
HSPG2-211ENST00000486901 LINC00596Q86U02 117 aa10.21□□□□□ -0.77
HSPG2-211ENST00000486901 C11orf53Q8IXP5 236 aa10.21□□□□□ -0.77
HSPG2-211ENST00000486901 OR9G1Q8NH87 305 aa10.21□□□□□ -0.77
HSPG2-211ENST00000486901 TAAR6Q96RI8 345 aa10.21□□□□□ -0.77
HSPG2-211ENST00000486901 S1PR3Q99500 378 aa10.21□□□□□ -0.77
HSPG2-211ENST00000486901 PMCHL2Q9BQD1 86 aa10.21□□□□□ -0.77
HSPG2-211ENST00000486901 ACACBO00763 2458 aa10.21□□□□□ -0.77
HSPG2-211ENST00000486901 SS18L1O75177 396 aaPredicted RBP10.21□□□□□ -0.77
HSPG2-211ENST00000486901 GPX1P07203 203 aa10.21□□□□□ -0.77
HSPG2-211ENST00000486901 C3orf79P0CE67 100 aa10.21□□□□□ -0.77
HSPG2-211ENST00000486901 MRPS11P82912 194 aaKnown RBP10.21□□□□□ -0.77
HSPG2-211ENST00000486901 SSPNQ14714 243 aa10.21□□□□□ -0.77
HSPG2-211ENST00000486901 TRAT1Q6PIZ9 186 aa10.21□□□□□ -0.77
HSPG2-211ENST00000486901 ACP7Q6ZNF0 438 aa10.21□□□□□ -0.77
HSPG2-211ENST00000486901 OR10W1Q8NGF6 305 aa10.21□□□□□ -0.77
HSPG2-211ENST00000486901 RNASE8Q8TDE3 154 aaKnown RBP10.21□□□□□ -0.77
HSPG2-211ENST00000486901 LINC00470Q9BZP3 86 aa10.21□□□□□ -0.77
HSPG2-211ENST00000486901 GP6Q9HCN6 339 aa10.21□□□□□ -0.77
HSPG2-211ENST00000486901 CLEC5AQ9NY25 188 aa10.21□□□□□ -0.77
HSPG2-211ENST00000486901 TECRQ9NZ01 308 aaKnown RBP10.21□□□□□ -0.77
HSPG2-211ENST00000486901 A0A1W2PS18 150 aa10.21□□□□□ -0.78
HSPG2-211ENST00000486901 LGALS4P56470 323 aa10.21□□□□□ -0.78
HSPG2-211ENST00000486901 RNASEKQ6P5S7 137 aaKnown RBP10.21□□□□□ -0.78
HSPG2-211ENST00000486901 TMPRSS2O15393 492 aa10.2□□□□□ -0.78
HSPG2-211ENST00000486901 RPL8P62917 257 aaKnown RBP10.2□□□□□ -0.78
HSPG2-211ENST00000486901 VWA1Q6PCB0 445 aa10.2□□□□□ -0.78
HSPG2-211ENST00000486901 TEX43Q6ZNM6 134 aa10.2□□□□□ -0.78
HSPG2-211ENST00000486901 KIR3DL3Q8N743 410 aa10.2□□□□□ -0.78
HSPG2-211ENST00000486901 NPIPB11E5RHQ5 1161 aa10.2□□□□□ -0.78
HSPG2-211ENST00000486901 NTN3O00634 580 aaPredicted RBP10.2□□□□□ -0.78
HSPG2-211ENST00000486901 SPRY3O43610 288 aa10.2□□□□□ -0.78
HSPG2-211ENST00000486901 PYYP10082 97 aa10.2□□□□□ -0.78
HSPG2-211ENST00000486901 SLAQ13239 276 aa10.2□□□□□ -0.78
HSPG2-211ENST00000486901 SRSF6Q13247 344 aaKnown RBP10.2□□□□□ -0.78
HSPG2-211ENST00000486901 ABI3Q9P2A4 366 aa10.2□□□□□ -0.78
HSPG2-211ENST00000486901 V9GYV3 84 aa10.2□□□□□ -0.78
HSPG2-211ENST00000486901 CSPG4Q6UVK1 2322 aa10.2□□□□□ -0.78
HSPG2-211ENST00000486901 ASH1LQ9NR48 2969 aaKnown RBP10.2□□□□□ -0.78
HSPG2-211ENST00000486901 C9orf172C9J069 976 aa10.2□□□□□ -0.78
HSPG2-211ENST00000486901 SNAI2O43623 268 aa10.2□□□□□ -0.78
HSPG2-211ENST00000486901 NPY1RP25929 384 aa10.2□□□□□ -0.78
HSPG2-211ENST00000486901 PRDX2P32119 198 aa10.2□□□□□ -0.78
HSPG2-211ENST00000486901 RANP62826 216 aaKnown RBP10.2□□□□□ -0.78
HSPG2-211ENST00000486901 MRPL49Q13405 166 aaKnown RBP10.2□□□□□ -0.78
HSPG2-211ENST00000486901 ACSF3Q4G176 576 aaPredicted RBP10.2□□□□□ -0.78
HSPG2-211ENST00000486901 TEPPQ6URK8 271 aa10.2□□□□□ -0.78
HSPG2-211ENST00000486901 SLC24A4Q8NFF2 622 aa10.2□□□□□ -0.78
HSPG2-211ENST00000486901 GMPPAQ96IJ6 420 aaPredicted RBP10.2□□□□□ -0.78
HSPG2-211ENST00000486901 ENY2Q9NPA8 101 aa10.2□□□□□ -0.78
HSPG2-211ENST00000486901 DCAF16Q9NXF7 216 aa10.2□□□□□ -0.78
HSPG2-211ENST00000486901 MRPS18CQ9Y3D5 142 aaKnown RBP10.2□□□□□ -0.78
HSPG2-211ENST00000486901 HYPMO75409 117 aa10.19□□□□□ -0.78
HSPG2-211ENST00000486901 NANOS1Q8WY41 292 aaKnown RBP10.19□□□□□ -0.78
HSPG2-211ENST00000486901 TNRC6AQ8NDV7 1962 aaKnown RBP10.19□□□□□ -0.78
HSPG2-211ENST00000486901 ZFYVE26Q68DK2 2539 aa10.19□□□□□ -0.78
HSPG2-211ENST00000486901 A0A1W2PNU3 283 aaPredicted RBP10.19□□□□□ -0.78
HSPG2-211ENST00000486901 MFAP2P55001 183 aa10.19□□□□□ -0.78
HSPG2-211ENST00000486901 YPEL3P61236 119 aaPredicted RBP10.19□□□□□ -0.78
HSPG2-211ENST00000486901 GNG5P63218 68 aa10.19□□□□□ -0.78
HSPG2-211ENST00000486901 ZNF718Q3SXZ3 478 aa10.19□□□□□ -0.78
HSPG2-211ENST00000486901 COL5A1-AS1Q5SY13 56 aa10.19□□□□□ -0.78
HSPG2-211ENST00000486901 SLC35E4Q6ICL7 350 aa10.19□□□□□ -0.78
HSPG2-211ENST00000486901 SLC35E1Q96K37 410 aa10.19□□□□□ -0.78
HSPG2-211ENST00000486901 NPVFQ9HCQ7 196 aa10.19□□□□□ -0.78
HSPG2-211ENST00000486901 IGKV1OR2-108A0A075B7D4 117 aa10.19□□□□□ -0.78
HSPG2-211ENST00000486901 CORTO00230 105 aa10.19□□□□□ -0.78
HSPG2-211ENST00000486901 CCL25O15444 150 aa10.19□□□□□ -0.78
HSPG2-211ENST00000486901 NDUFB8O95169 186 aa10.19□□□□□ -0.78
HSPG2-211ENST00000486901 SFTPCP11686 197 aa10.19□□□□□ -0.78
HSPG2-211ENST00000486901 USF1P22415 310 aaPredicted RBP10.19□□□□□ -0.78
HSPG2-211ENST00000486901 ZNF137PP52743 207 aa10.19□□□□□ -0.78
HSPG2-211ENST00000486901 TIGITQ495A1 244 aa10.19□□□□□ -0.78
HSPG2-211ENST00000486901 Q8IYB0 196 aa10.19□□□□□ -0.78
HSPG2-211ENST00000486901 DEFB124Q8NES8 71 aa10.19□□□□□ -0.78
HSPG2-211ENST00000486901 NABP2Q9BQ15 211 aa10.19□□□□□ -0.78
HSPG2-211ENST00000486901 SETD2Q9BYW2 2564 aaPredicted RBP10.18□□□□□ -0.78
HSPG2-211ENST00000486901 LNP1A1A4G5 178 aa10.18□□□□□ -0.78
HSPG2-211ENST00000486901 DPRXA6NFQ7 191 aa10.18□□□□□ -0.78
HSPG2-211ENST00000486901 GGTLC3B5MD39 225 aa10.18□□□□□ -0.78
HSPG2-211ENST00000486901 BMPR1BO00238 502 aa10.18□□□□□ -0.78
HSPG2-211ENST00000486901 OPRK1P41145 380 aa10.18□□□□□ -0.78
HSPG2-211ENST00000486901 RHOBP62745 196 aa10.18□□□□□ -0.78
HSPG2-211ENST00000486901 PAFAH1B2P68402 229 aa10.18□□□□□ -0.78
HSPG2-211ENST00000486901 SSBP2P81877 361 aaPredicted RBP10.18□□□□□ -0.78
HSPG2-211ENST00000486901 ZNF766Q5HY98 468 aa10.18□□□□□ -0.78
HSPG2-211ENST00000486901 OR2T6Q8NHC8 308 aa10.18□□□□□ -0.78
HSPG2-211ENST00000486901 BLNKQ8WV28 456 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms